Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
PTPN1P18031 AL355596.1-201ENST00000565399 3996 ntBASIC3.11□□□□□ -1.91
PTPN1P18031 AC103988.1-201ENST00000566382 2177 ntBASIC3.11□□□□□ -1.91
PTPN1P18031 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
PTPN1P18031 FAM35CP-201ENST00000554755 2470 ntBASIC3.1□□□□□ -1.91
PTPN1P18031 AC093010.3-201ENST00000570269 15214 ntBASIC3.1□□□□□ -1.91
PTPN1P18031 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
PTPN1P18031 Y_RNA.217-201ENST00000364214 105 ntBASIC3.1□□□□□ -1.91
PTPN1P18031 RNU6-454P-201ENST00000364292 107 ntBASIC3.1□□□□□ -1.91
PTPN1P18031 RNU6-886P-201ENST00000384319 105 ntBASIC3.1□□□□□ -1.91
PTPN1P18031 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.1□□□□□ -1.91
PTPN1P18031 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.1□□□□□ -1.91
PTPN1P18031 SNORD2.1-201ENST00000458762 69 ntBASIC3.1□□□□□ -1.91
PTPN1P18031 Y_RNA.641-201ENST00000459414 105 ntBASIC3.1□□□□□ -1.91
PTPN1P18031 AC140059.1-201ENST00000489238 361 ntBASIC3.1□□□□□ -1.91
PTPN1P18031 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.1□□□□□ -1.91
PTPN1P18031 RN7SKP40-201ENST00000517211 242 ntBASIC3.1□□□□□ -1.91
PTPN1P18031 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.1□□□□□ -1.91
PTPN1P18031 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.1□□□□□ -1.91
PTPN1P18031 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.1□□□□□ -1.91
PTPN1P18031 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PTPN1P18031 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PTPN1P18031 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PTPN1P18031 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PTPN1P18031 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PTPN1P18031 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.91
PTPN1P18031 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.09□□□□□ -1.91
PTPN1P18031 AC096644.4-201ENST00000563417 2912 ntBASIC3.09□□□□□ -1.91
PTPN1P18031 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
PTPN1P18031 U3.8-201ENST00000363675 217 ntBASIC3.09□□□□□ -1.91
PTPN1P18031 SNORA9.2-201ENST00000365361 133 ntBASIC3.09□□□□□ -1.91
PTPN1P18031 SNORA67.2-201ENST00000384300 149 ntBASIC3.09□□□□□ -1.91
PTPN1P18031 RNU6-1248P-201ENST00000391096 64 ntBASIC3.09□□□□□ -1.91
PTPN1P18031 U3.40-201ENST00000408706 208 ntBASIC3.09□□□□□ -1.91
PTPN1P18031 Y_RNA.597-201ENST00000410463 100 ntBASIC3.09□□□□□ -1.91
PTPN1P18031 COTL1P1-201ENST00000422309 375 ntBASIC3.09□□□□□ -1.91
PTPN1P18031 TOMM22P2-201ENST00000430735 237 ntBASIC3.09□□□□□ -1.91
PTPN1P18031 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.09□□□□□ -1.91
PTPN1P18031 AC104332.1-201ENST00000440471 797 ntBASIC3.09□□□□□ -1.91
PTPN1P18031 RNU7-120P-201ENST00000459334 63 ntBASIC3.09□□□□□ -1.91
PTPN1P18031 RN7SKP43-201ENST00000516173 320 ntBASIC3.09□□□□□ -1.91
PTPN1P18031 LARP7P3-201ENST00000579888 337 ntBASIC3.09□□□□□ -1.91
PTPN1P18031 AC005828.6-201ENST00000606610 232 ntBASIC3.09□□□□□ -1.91
PTPN1P18031 AC073349.3-201ENST00000617616 186 ntBASIC3.09□□□□□ -1.91
PTPN1P18031 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.09□□□□□ -1.91
PTPN1P18031 AC008873.1-201ENST00000625051 138 ntBASIC3.09□□□□□ -1.91
PTPN1P18031 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.09□□□□□ -1.92
PTPN1P18031 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
PTPN1P18031 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PTPN1P18031 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.08□□□□□ -1.92
PTPN1P18031 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.08□□□□□ -1.92
PTPN1P18031 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PTPN1P18031 RNU6-324P-201ENST00000363957 106 ntBASIC3.08□□□□□ -1.92
PTPN1P18031 Y_RNA.329-201ENST00000365209 107 ntBASIC3.08□□□□□ -1.92
PTPN1P18031 RNU6-1027P-201ENST00000383998 107 ntBASIC3.08□□□□□ -1.92
PTPN1P18031 AC244505.4-201ENST00000434905 287 ntBASIC3.08□□□□□ -1.92
PTPN1P18031 AC107083.1-201ENST00000439643 279 ntBASIC3.08□□□□□ -1.92
PTPN1P18031 SSXP5-201ENST00000443473 287 ntBASIC3.08□□□□□ -1.92
PTPN1P18031 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.08□□□□□ -1.92
PTPN1P18031 AC107393.1-201ENST00000512403 346 ntBASIC3.08□□□□□ -1.92
PTPN1P18031 RN7SKP282-201ENST00000516824 299 ntBASIC3.08□□□□□ -1.92
PTPN1P18031 AL033523.1-201ENST00000605153 153 ntBASIC3.08□□□□□ -1.92
PTPN1P18031 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PTPN1P18031 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.08□□□□□ -1.92
PTPN1P18031 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.08□□□□□ -1.92
PTPN1P18031 RNU6-1020P-201ENST00000363684 107 ntBASIC3.07□□□□□ -1.92
PTPN1P18031 SNORA80A-201ENST00000363922 136 ntBASIC3.07□□□□□ -1.92
PTPN1P18031 SNORA51.4-201ENST00000364993 124 ntBASIC3.07□□□□□ -1.92
PTPN1P18031 AL031121.1-201ENST00000406553 254 ntBASIC3.07□□□□□ -1.92
PTPN1P18031 RNA5SP344-201ENST00000411081 104 ntBASIC3.07□□□□□ -1.92
PTPN1P18031 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.07□□□□□ -1.92
PTPN1P18031 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.07□□□□□ -1.92
PTPN1P18031 MTND2P29-201ENST00000438595 412 ntBASIC3.07□□□□□ -1.92
PTPN1P18031 RNU6-436P-201ENST00000516171 114 ntBASIC3.07□□□□□ -1.92
PTPN1P18031 RNU5F-4P-201ENST00000516581 114 ntBASIC3.07□□□□□ -1.92
PTPN1P18031 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.07□□□□□ -1.92
PTPN1P18031 AC007536.1-201ENST00000533382 349 ntBASIC3.07□□□□□ -1.92
PTPN1P18031 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PTPN1P18031 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PTPN1P18031 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
PTPN1P18031 PCNPP3-201ENST00000393579 471 ntBASIC3.06□□□□□ -1.92
PTPN1P18031 MIR887-201ENST00000401258 79 ntBASIC3.06□□□□□ -1.92
PTPN1P18031 AC024067.1-201ENST00000426199 223 ntBASIC3.06□□□□□ -1.92
PTPN1P18031 AL135938.1-201ENST00000443141 297 ntBASIC3.06□□□□□ -1.92
PTPN1P18031 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.06□□□□□ -1.92
PTPN1P18031 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PTPN1P18031 RNU6-1098P-201ENST00000516772 96 ntBASIC3.06□□□□□ -1.92
PTPN1P18031 SCARNA15.3-201ENST00000626315 122 ntBASIC3.06□□□□□ -1.92
PTPN1P18031 SCARNA4.1-201ENST00000628597 123 ntBASIC3.06□□□□□ -1.92
PTPN1P18031 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
PTPN1P18031 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PTPN1P18031 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
PTPN1P18031 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
PTPN1P18031 RNU1-72P-201ENST00000362976 153 ntBASIC3.05□□□□□ -1.92
PTPN1P18031 RNU6-1305P-201ENST00000364353 104 ntBASIC3.05□□□□□ -1.92
PTPN1P18031 RNU6-47P-201ENST00000383866 107 ntBASIC3.05□□□□□ -1.92
PTPN1P18031 MIR586-201ENST00000385035 97 ntBASIC3.05□□□□□ -1.92
PTPN1P18031 COX6CP10-201ENST00000416832 224 ntBASIC3.05□□□□□ -1.92
PTPN1P18031 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.05□□□□□ -1.92
PTPN1P18031 AC025750.2-201ENST00000442609 450 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms