Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 Y_RNA.549-201ENST00000384657 102 ntBASIC3.59□□□□□ -1.83
NID1P14543 MIR200C-201ENST00000384980 68 ntBASIC3.59□□□□□ -1.83
NID1P14543 MIR199A2-201ENST00000385289 110 ntBASIC3.59□□□□□ -1.83
NID1P14543 RNU2-49P-201ENST00000410666 184 ntBASIC3.59□□□□□ -1.83
NID1P14543 RPS3AP1-201ENST00000413190 320 ntBASIC3.59□□□□□ -1.83
NID1P14543 CRYBB2P1-203ENST00000415709 538 ntBASIC3.59□□□□□ -1.83
NID1P14543 SNORD11-201ENST00000459124 84 ntBASIC3.59□□□□□ -1.83
NID1P14543 RNU6-221P-201ENST00000459541 99 ntBASIC3.59□□□□□ -1.83
NID1P14543 AC112771.1-201ENST00000463581 102 ntBASIC3.59□□□□□ -1.83
NID1P14543 AL110115.1-201ENST00000614396 364 ntBASIC3.59□□□□□ -1.83
NID1P14543 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.59□□□□□ -1.83
NID1P14543 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
NID1P14543 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NID1P14543 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
NID1P14543 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NID1P14543 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NID1P14543 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.58□□□□□ -1.84
NID1P14543 RNA5SP173-201ENST00000364857 136 ntBASIC3.58□□□□□ -1.84
NID1P14543 RNU6-1014P-201ENST00000383940 103 ntBASIC3.58□□□□□ -1.84
NID1P14543 RNU1-89P-201ENST00000384592 164 ntBASIC3.58□□□□□ -1.84
NID1P14543 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
NID1P14543 RPL27AP5-201ENST00000469428 449 ntBASIC3.58□□□□□ -1.84
NID1P14543 RPL39P34-201ENST00000477141 156 ntBASIC3.58□□□□□ -1.84
NID1P14543 RN7SKP43-201ENST00000516173 320 ntBASIC3.58□□□□□ -1.84
NID1P14543 MIR3944-201ENST00000581277 108 ntBASIC3.58□□□□□ -1.84
NID1P14543 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.58□□□□□ -1.84
NID1P14543 AL606490.9-201ENST00000603331 271 ntBASIC3.58□□□□□ -1.84
NID1P14543 AC062037.1-201ENST00000605302 128 ntBASIC3.58□□□□□ -1.84
NID1P14543 AC010889.1-201ENST00000566193 2666 ntBASIC3.58□□□□□ -1.84
NID1P14543 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
NID1P14543 AC058791.1-201ENST00000608412 3198 ntBASIC3.58□□□□□ -1.84
NID1P14543 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
NID1P14543 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.58□□□□□ -1.84
NID1P14543 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
NID1P14543 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NID1P14543 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
NID1P14543 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NID1P14543 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.57□□□□□ -1.84
NID1P14543 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
NID1P14543 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
NID1P14543 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.57□□□□□ -1.84
NID1P14543 RNA5SP124-201ENST00000362739 110 ntBASIC3.57□□□□□ -1.84
NID1P14543 SNORD32B-201ENST00000364460 84 ntBASIC3.57□□□□□ -1.84
NID1P14543 RNU6-57P-201ENST00000411348 103 ntBASIC3.57□□□□□ -1.84
NID1P14543 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.57□□□□□ -1.84
NID1P14543 AC008155.2-201ENST00000464337 397 ntBASIC3.57□□□□□ -1.84
NID1P14543 COX6CP6-201ENST00000490840 228 ntBASIC3.57□□□□□ -1.84
NID1P14543 OR9P1P-201ENST00000496431 281 ntBASIC3.57□□□□□ -1.84
NID1P14543 RNU6-113P-201ENST00000516653 101 ntBASIC3.57□□□□□ -1.84
NID1P14543 RNU7-149P-201ENST00000516739 59 ntBASIC3.57□□□□□ -1.84
NID1P14543 AC007751.1-201ENST00000529260 376 ntBASIC3.57□□□□□ -1.84
NID1P14543 MIR4644-201ENST00000579929 84 ntBASIC3.57□□□□□ -1.84
NID1P14543 AL161756.2-201ENST00000604597 246 ntBASIC3.57□□□□□ -1.84
NID1P14543 AC000403.1-201ENST00000613696 3585 ntBASIC3.57□□□□□ -1.84
NID1P14543 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NID1P14543 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
NID1P14543 AC006504.1-201ENST00000562493 3666 ntBASIC3.56□□□□□ -1.84
NID1P14543 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
NID1P14543 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
NID1P14543 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.56□□□□□ -1.84
NID1P14543 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NID1P14543 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.56□□□□□ -1.84
NID1P14543 SNORA63.1-201ENST00000362493 131 ntBASIC3.56□□□□□ -1.84
NID1P14543 RNA5SP322-201ENST00000363617 119 ntBASIC3.56□□□□□ -1.84
NID1P14543 RNU6-525P-201ENST00000363685 104 ntBASIC3.56□□□□□ -1.84
NID1P14543 RNU6-1138P-201ENST00000365359 106 ntBASIC3.56□□□□□ -1.84
NID1P14543 RNU6-440P-201ENST00000390882 105 ntBASIC3.56□□□□□ -1.84
NID1P14543 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.56□□□□□ -1.84
NID1P14543 AL590004.2-201ENST00000404787 371 ntBASIC3.56□□□□□ -1.84
NID1P14543 AC093578.1-201ENST00000415219 368 ntBASIC3.56□□□□□ -1.84
NID1P14543 AC002075.2-201ENST00000425207 252 ntBASIC3.56□□□□□ -1.84
NID1P14543 RPL23AP83-201ENST00000434984 473 ntBASIC3.56□□□□□ -1.84
NID1P14543 NDUFB1P1-201ENST00000435191 180 ntBASIC3.56□□□□□ -1.84
NID1P14543 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.56□□□□□ -1.84
NID1P14543 PPIAP15-201ENST00000479662 484 ntBASIC3.56□□□□□ -1.84
NID1P14543 ATP5EP1-201ENST00000510257 156 ntBASIC3.56□□□□□ -1.84
NID1P14543 RNA5SP236-201ENST00000516169 116 ntBASIC3.56□□□□□ -1.84
NID1P14543 RNU6-365P-201ENST00000517113 106 ntBASIC3.56□□□□□ -1.84
NID1P14543 RNU6-94P-201ENST00000607728 107 ntBASIC3.56□□□□□ -1.84
NID1P14543 MIR6500-201ENST00000622700 86 ntBASIC3.56□□□□□ -1.84
NID1P14543 AC006435.5-201ENST00000624486 112 ntBASIC3.56□□□□□ -1.84
NID1P14543 MIR1245B-201ENST00000636115 69 ntBASIC3.56□□□□□ -1.84
NID1P14543 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
NID1P14543 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NID1P14543 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NID1P14543 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
NID1P14543 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NID1P14543 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NID1P14543 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NID1P14543 AL589743.1-201ENST00000551932 2712 ntBASIC3.55□□□□□ -1.84
NID1P14543 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.55□□□□□ -1.84
NID1P14543 RNA5SP97-201ENST00000365006 84 ntBASIC3.55□□□□□ -1.84
NID1P14543 RNU6-117P-201ENST00000365415 107 ntBASIC3.55□□□□□ -1.84
NID1P14543 MIR488-201ENST00000365739 83 ntBASIC3.55□□□□□ -1.84
NID1P14543 MIR562-201ENST00000384894 95 ntBASIC3.55□□□□□ -1.84
NID1P14543 RNA5SP354-201ENST00000391247 136 ntBASIC3.55□□□□□ -1.84
NID1P14543 HMGN2P8-201ENST00000391458 268 ntBASIC3.55□□□□□ -1.84
NID1P14543 AC007064.1-201ENST00000412238 351 ntBASIC3.55□□□□□ -1.84
NID1P14543 AC245102.2-201ENST00000448956 180 ntBASIC3.55□□□□□ -1.84
NID1P14543 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms