Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC007536.1-201ENST00000533382 349 ntBASIC3.1□□□□□ -1.91
COL6A2P12110 AC018630.3-201ENST00000542637 96 ntBASIC3.1□□□□□ -1.91
COL6A2P12110 AL137100.2-201ENST00000555786 315 ntBASIC3.1□□□□□ -1.91
COL6A2P12110 MIR3684-201ENST00000579779 74 ntBASIC3.1□□□□□ -1.91
COL6A2P12110 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.1□□□□□ -1.91
COL6A2P12110 MIR7157-201ENST00000635801 60 ntBASIC3.1□□□□□ -1.91
COL6A2P12110 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
COL6A2P12110 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
COL6A2P12110 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
COL6A2P12110 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
COL6A2P12110 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
COL6A2P12110 RNU6-545P-201ENST00000362681 104 ntBASIC3.09□□□□□ -1.91
COL6A2P12110 Y_RNA.111-201ENST00000363248 100 ntBASIC3.09□□□□□ -1.91
COL6A2P12110 RNU1-33P-201ENST00000364249 162 ntBASIC3.09□□□□□ -1.91
COL6A2P12110 SNORA51.4-201ENST00000364993 124 ntBASIC3.09□□□□□ -1.91
COL6A2P12110 SNORA26.7-201ENST00000391288 122 ntBASIC3.09□□□□□ -1.91
COL6A2P12110 MIR300-201ENST00000401138 83 ntBASIC3.09□□□□□ -1.91
COL6A2P12110 NDUFB4P4-201ENST00000404822 243 ntBASIC3.09□□□□□ -1.91
COL6A2P12110 RNU6-1328P-201ENST00000410938 106 ntBASIC3.09□□□□□ -1.91
COL6A2P12110 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.09□□□□□ -1.91
COL6A2P12110 RN7SL499P-201ENST00000481141 276 ntBASIC3.09□□□□□ -1.91
COL6A2P12110 SRIP1-201ENST00000489235 288 ntBASIC3.09□□□□□ -1.91
COL6A2P12110 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.09□□□□□ -1.91
COL6A2P12110 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
COL6A2P12110 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
COL6A2P12110 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.09□□□□□ -1.91
COL6A2P12110 MIR5692C2-201ENST00000577959 77 ntBASIC3.09□□□□□ -1.91
COL6A2P12110 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.09□□□□□ -1.91
COL6A2P12110 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.09□□□□□ -1.91
COL6A2P12110 AL078604.3-201ENST00000615580 211 ntBASIC3.09□□□□□ -1.91
COL6A2P12110 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
COL6A2P12110 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
COL6A2P12110 AC138915.1-201ENST00000565427 1685 ntBASIC3.08□□□□□ -1.92
COL6A2P12110 AL355596.1-201ENST00000565399 3996 ntBASIC3.08□□□□□ -1.92
COL6A2P12110 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
COL6A2P12110 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.08□□□□□ -1.92
COL6A2P12110 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.08□□□□□ -1.92
COL6A2P12110 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
COL6A2P12110 SNORA68.1-201ENST00000364537 132 ntBASIC3.08□□□□□ -1.92
COL6A2P12110 Y_RNA.262-201ENST00000364641 102 ntBASIC3.08□□□□□ -1.92
COL6A2P12110 SNORD21-201ENST00000383953 95 ntBASIC3.08□□□□□ -1.92
COL6A2P12110 RNVU1-14-201ENST00000384770 164 ntBASIC3.08□□□□□ -1.92
COL6A2P12110 AL031003.1-201ENST00000404229 172 ntBASIC3.08□□□□□ -1.92
COL6A2P12110 Z92545.1-201ENST00000411782 234 ntBASIC3.08□□□□□ -1.92
COL6A2P12110 OOSP1P1-201ENST00000423265 274 ntBASIC3.08□□□□□ -1.92
COL6A2P12110 Y_RNA.637-201ENST00000459424 114 ntBASIC3.08□□□□□ -1.92
COL6A2P12110 AC140059.1-201ENST00000489238 361 ntBASIC3.08□□□□□ -1.92
COL6A2P12110 SEM1P1-201ENST00000506694 209 ntBASIC3.08□□□□□ -1.92
COL6A2P12110 RNU5F-4P-201ENST00000516581 114 ntBASIC3.08□□□□□ -1.92
COL6A2P12110 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.08□□□□□ -1.92
COL6A2P12110 AC009127.3-201ENST00000570531 403 ntBASIC3.08□□□□□ -1.92
COL6A2P12110 MIR5195-201ENST00000583555 115 ntBASIC3.08□□□□□ -1.92
COL6A2P12110 AL713866.2-201ENST00000603579 219 ntBASIC3.08□□□□□ -1.92
COL6A2P12110 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.08□□□□□ -1.92
COL6A2P12110 MIR7975-201ENST00000619350 68 ntBASIC3.08□□□□□ -1.92
COL6A2P12110 AL365265.1-201ENST00000621045 234 ntBASIC3.08□□□□□ -1.92
COL6A2P12110 AC090517.3-201ENST00000625170 141 ntBASIC3.08□□□□□ -1.92
COL6A2P12110 MIR6733-201ENST00000635723 61 ntBASIC3.08□□□□□ -1.92
COL6A2P12110 U6.115-201ENST00000636045 103 ntBASIC3.08□□□□□ -1.92
COL6A2P12110 U6.106-201ENST00000636360 105 ntBASIC3.08□□□□□ -1.92
COL6A2P12110 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
COL6A2P12110 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
COL6A2P12110 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
COL6A2P12110 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
COL6A2P12110 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
COL6A2P12110 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.07□□□□□ -1.92
COL6A2P12110 SNORD114-7-201ENST00000362520 77 ntBASIC3.07□□□□□ -1.92
COL6A2P12110 RNU6-324P-201ENST00000363957 106 ntBASIC3.07□□□□□ -1.92
COL6A2P12110 RNU6-1305P-201ENST00000364353 104 ntBASIC3.07□□□□□ -1.92
COL6A2P12110 RNU6-1274P-201ENST00000384557 107 ntBASIC3.07□□□□□ -1.92
COL6A2P12110 MIR1185-2-201ENST00000408687 86 ntBASIC3.07□□□□□ -1.92
COL6A2P12110 RNU6-710P-201ENST00000410424 105 ntBASIC3.07□□□□□ -1.92
COL6A2P12110 AL513477.1-202ENST00000417061 214 ntBASIC3.07□□□□□ -1.92
COL6A2P12110 MTND2P29-201ENST00000438595 412 ntBASIC3.07□□□□□ -1.92
COL6A2P12110 RPS29P26-201ENST00000477483 171 ntBASIC3.07□□□□□ -1.92
COL6A2P12110 AC083906.5-201ENST00000503722 328 ntBASIC3.07□□□□□ -1.92
COL6A2P12110 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.07□□□□□ -1.92
COL6A2P12110 SCARNA3-201ENST00000517097 143 ntBASIC3.07□□□□□ -1.92
COL6A2P12110 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.07□□□□□ -1.92
COL6A2P12110 AC136628.3-201ENST00000521868 290 ntBASIC3.07□□□□□ -1.92
COL6A2P12110 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.07□□□□□ -1.92
COL6A2P12110 MIR7515-201ENST00000637837 67 ntBASIC3.07□□□□□ -1.92
COL6A2P12110 MIR622-201ENST00000638396 96 ntBASIC3.07□□□□□ -1.92
COL6A2P12110 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.07□□□□□ -1.92
COL6A2P12110 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
COL6A2P12110 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
COL6A2P12110 Z82209.1-201ENST00000422141 2135 ntBASIC3.07□□□□□ -1.92
COL6A2P12110 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
COL6A2P12110 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
COL6A2P12110 RNU6-653P-201ENST00000363074 106 ntBASIC3.06□□□□□ -1.92
COL6A2P12110 Y_RNA.233-201ENST00000364407 101 ntBASIC3.06□□□□□ -1.92
COL6A2P12110 SNORA7.4-201ENST00000384249 137 ntBASIC3.06□□□□□ -1.92
COL6A2P12110 SNORD15B-201ENST00000384714 146 ntBASIC3.06□□□□□ -1.92
COL6A2P12110 SNORA40.19-201ENST00000390846 128 ntBASIC3.06□□□□□ -1.92
COL6A2P12110 AL357075.1-201ENST00000404107 726 ntBASIC3.06□□□□□ -1.92
COL6A2P12110 RPL30P4-201ENST00000429309 333 ntBASIC3.06□□□□□ -1.92
COL6A2P12110 UBBP3-201ENST00000445497 241 ntBASIC3.06□□□□□ -1.92
COL6A2P12110 RPL21P10-201ENST00000463521 490 ntBASIC3.06□□□□□ -1.92
COL6A2P12110 HMGN2P9-201ENST00000476875 229 ntBASIC3.06□□□□□ -1.92
COL6A2P12110 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms