Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
IGHV3-43DP0DP04 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
IGHV3-43DP0DP04 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
IGHV3-43DP0DP04 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.16□□□□□ -2.22
IGHV3-43DP0DP04 RNU1-62P-201ENST00000362599 164 ntBASIC1.16□□□□□ -2.22
IGHV3-43DP0DP04 SNORA33-201ENST00000363664 130 ntBASIC1.16□□□□□ -2.22
IGHV3-43DP0DP04 RNU6-1013P-201ENST00000384180 107 ntBASIC1.16□□□□□ -2.22
IGHV3-43DP0DP04 Y_RNA.453-201ENST00000384223 109 ntBASIC1.16□□□□□ -2.22
IGHV3-43DP0DP04 RNU6-1215P-201ENST00000384441 102 ntBASIC1.16□□□□□ -2.22
IGHV3-43DP0DP04 RNU6-831P-201ENST00000384548 107 ntBASIC1.16□□□□□ -2.22
IGHV3-43DP0DP04 RNU6-417P-201ENST00000384712 107 ntBASIC1.16□□□□□ -2.22
IGHV3-43DP0DP04 RNA5SP213-201ENST00000391031 106 ntBASIC1.16□□□□□ -2.22
IGHV3-43DP0DP04 SNORD115-47-201ENST00000391226 86 ntBASIC1.16□□□□□ -2.22
IGHV3-43DP0DP04 RNA5SP504-201ENST00000410676 117 ntBASIC1.16□□□□□ -2.22
IGHV3-43DP0DP04 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.16□□□□□ -2.22
IGHV3-43DP0DP04 AC073910.1-201ENST00000445047 438 ntBASIC1.16□□□□□ -2.22
IGHV3-43DP0DP04 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.16□□□□□ -2.22
IGHV3-43DP0DP04 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.16□□□□□ -2.22
IGHV3-43DP0DP04 RPL30P10-201ENST00000488148 337 ntBASIC1.16□□□□□ -2.22
IGHV3-43DP0DP04 RNU6-970P-201ENST00000516312 107 ntBASIC1.16□□□□□ -2.22
IGHV3-43DP0DP04 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.16□□□□□ -2.22
IGHV3-43DP0DP04 AC027288.2-201ENST00000553028 243 ntBASIC1.16□□□□□ -2.22
IGHV3-43DP0DP04 DEFB122-202ENST00000569013 197 ntBASIC1.16□□□□□ -2.22
IGHV3-43DP0DP04 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.16□□□□□ -2.22
IGHV3-43DP0DP04 AC093913.1-201ENST00000614178 329 ntBASIC1.16□□□□□ -2.22
IGHV3-43DP0DP04 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.16□□□□□ -2.22
IGHV3-43DP0DP04 ICE2P2-201ENST00000483823 2787 ntBASIC1.16□□□□□ -2.22
IGHV3-43DP0DP04 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.16□□□□□ -2.22
IGHV3-43DP0DP04 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
IGHV3-43DP0DP04 RNU6-873P-201ENST00000363833 107 ntBASIC1.15□□□□□ -2.23
IGHV3-43DP0DP04 RNU6-271P-201ENST00000363858 105 ntBASIC1.15□□□□□ -2.23
IGHV3-43DP0DP04 RNU6-331P-201ENST00000384724 107 ntBASIC1.15□□□□□ -2.23
IGHV3-43DP0DP04 MIR515-2-201ENST00000384883 83 ntBASIC1.15□□□□□ -2.23
IGHV3-43DP0DP04 MIR515-1-201ENST00000384884 83 ntBASIC1.15□□□□□ -2.23
IGHV3-43DP0DP04 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.15□□□□□ -2.23
IGHV3-43DP0DP04 RNU6-1148P-201ENST00000410992 104 ntBASIC1.15□□□□□ -2.23
IGHV3-43DP0DP04 RPL30P16-201ENST00000419341 429 ntBASIC1.15□□□□□ -2.23
IGHV3-43DP0DP04 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.15□□□□□ -2.23
IGHV3-43DP0DP04 AC008134.1-201ENST00000420943 193 ntBASIC1.15□□□□□ -2.23
IGHV3-43DP0DP04 snoU13.27-201ENST00000459278 104 ntBASIC1.15□□□□□ -2.23
IGHV3-43DP0DP04 RNU1-92P-201ENST00000517017 135 ntBASIC1.15□□□□□ -2.23
IGHV3-43DP0DP04 RNU1-54P-201ENST00000517181 120 ntBASIC1.15□□□□□ -2.23
IGHV3-43DP0DP04 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.15□□□□□ -2.23
IGHV3-43DP0DP04 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.15□□□□□ -2.23
IGHV3-43DP0DP04 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.15□□□□□ -2.23
IGHV3-43DP0DP04 MIR4273-201ENST00000582824 84 ntBASIC1.15□□□□□ -2.23
IGHV3-43DP0DP04 MIR3688-2-201ENST00000636963 87 ntBASIC1.15□□□□□ -2.23
IGHV3-43DP0DP04 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.15□□□□□ -2.23
IGHV3-43DP0DP04 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.15□□□□□ -2.23
IGHV3-43DP0DP04 MTND4P12-201ENST00000498999 1377 ntBASIC1.14□□□□□ -2.23
IGHV3-43DP0DP04 U8.1-201ENST00000362843 134 ntBASIC1.14□□□□□ -2.23
IGHV3-43DP0DP04 RNU6-727P-201ENST00000363592 107 ntBASIC1.14□□□□□ -2.23
IGHV3-43DP0DP04 RNU6-137P-201ENST00000363680 108 ntBASIC1.14□□□□□ -2.23
IGHV3-43DP0DP04 RNU6-457P-201ENST00000363999 107 ntBASIC1.14□□□□□ -2.23
IGHV3-43DP0DP04 SNORD87-201ENST00000364849 89 ntBASIC1.14□□□□□ -2.23
IGHV3-43DP0DP04 Y_RNA.287-201ENST00000364853 94 ntBASIC1.14□□□□□ -2.23
IGHV3-43DP0DP04 RNU6-17P-201ENST00000384245 107 ntBASIC1.14□□□□□ -2.23
IGHV3-43DP0DP04 RNU6-18P-201ENST00000384527 107 ntBASIC1.14□□□□□ -2.23
IGHV3-43DP0DP04 Y_RNA.533-201ENST00000384596 114 ntBASIC1.14□□□□□ -2.23
IGHV3-43DP0DP04 RNA5SP323-201ENST00000391094 133 ntBASIC1.14□□□□□ -2.23
IGHV3-43DP0DP04 RNU1-78P-201ENST00000391248 165 ntBASIC1.14□□□□□ -2.23
IGHV3-43DP0DP04 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
IGHV3-43DP0DP04 AC016909.1-201ENST00000415916 166 ntBASIC1.14□□□□□ -2.23
IGHV3-43DP0DP04 COX6CP10-201ENST00000416832 224 ntBASIC1.14□□□□□ -2.23
IGHV3-43DP0DP04 RNU1-98P-201ENST00000458992 160 ntBASIC1.14□□□□□ -2.23
IGHV3-43DP0DP04 RNU6-221P-201ENST00000459541 99 ntBASIC1.14□□□□□ -2.23
IGHV3-43DP0DP04 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.14□□□□□ -2.23
IGHV3-43DP0DP04 RNU6-1088P-201ENST00000516850 104 ntBASIC1.14□□□□□ -2.23
IGHV3-43DP0DP04 RNA5SP454-201ENST00000517231 127 ntBASIC1.14□□□□□ -2.23
IGHV3-43DP0DP04 AC025647.1-201ENST00000517879 253 ntBASIC1.14□□□□□ -2.23
IGHV3-43DP0DP04 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.14□□□□□ -2.23
IGHV3-43DP0DP04 UBL5P4-201ENST00000562584 236 ntBASIC1.14□□□□□ -2.23
IGHV3-43DP0DP04 AP001485.1-201ENST00000604799 199 ntBASIC1.14□□□□□ -2.23
IGHV3-43DP0DP04 AC009248.2-201ENST00000619826 254 ntBASIC1.14□□□□□ -2.23
IGHV3-43DP0DP04 AC095038.3-201ENST00000634439 195 ntBASIC1.14□□□□□ -2.23
IGHV3-43DP0DP04 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
IGHV3-43DP0DP04 RNU6-280P-201ENST00000364145 104 ntBASIC1.13□□□□□ -2.23
IGHV3-43DP0DP04 SNORA4.2-201ENST00000365313 147 ntBASIC1.13□□□□□ -2.23
IGHV3-43DP0DP04 RNA5SP467-201ENST00000391274 118 ntBASIC1.13□□□□□ -2.23
IGHV3-43DP0DP04 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
IGHV3-43DP0DP04 AC243428.1-201ENST00000421099 264 ntBASIC1.13□□□□□ -2.23
IGHV3-43DP0DP04 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.13□□□□□ -2.23
IGHV3-43DP0DP04 RPS26P55-201ENST00000471178 356 ntBASIC1.13□□□□□ -2.23
IGHV3-43DP0DP04 AC092989.1-201ENST00000481235 277 ntBASIC1.13□□□□□ -2.23
IGHV3-43DP0DP04 RPS29P25-201ENST00000481709 171 ntBASIC1.13□□□□□ -2.23
IGHV3-43DP0DP04 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.13□□□□□ -2.23
IGHV3-43DP0DP04 RNA5SP445-201ENST00000515889 115 ntBASIC1.13□□□□□ -2.23
IGHV3-43DP0DP04 RNU7-175P-201ENST00000515915 61 ntBASIC1.13□□□□□ -2.23
IGHV3-43DP0DP04 RNU6-566P-201ENST00000516790 107 ntBASIC1.13□□□□□ -2.23
IGHV3-43DP0DP04 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.13□□□□□ -2.23
IGHV3-43DP0DP04 MIR5696-201ENST00000578474 85 ntBASIC1.13□□□□□ -2.23
IGHV3-43DP0DP04 AC090517.2-201ENST00000614966 680 ntBASIC1.13□□□□□ -2.23
IGHV3-43DP0DP04 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
IGHV3-43DP0DP04 MIR302D-201ENST00000362275 68 ntBASIC1.12□□□□□ -2.23
IGHV3-43DP0DP04 U3.8-201ENST00000363675 217 ntBASIC1.12□□□□□ -2.23
IGHV3-43DP0DP04 RNU6-1059P-201ENST00000363752 98 ntBASIC1.12□□□□□ -2.23
IGHV3-43DP0DP04 RNU6-1240P-201ENST00000365155 104 ntBASIC1.12□□□□□ -2.23
IGHV3-43DP0DP04 RNU6-596P-201ENST00000365395 98 ntBASIC1.12□□□□□ -2.23
IGHV3-43DP0DP04 Y_RNA.415-201ENST00000384012 112 ntBASIC1.12□□□□□ -2.23
IGHV3-43DP0DP04 RNU6-203P-201ENST00000384038 104 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms