Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC005562.2-201ENST00000618264 111 ntBASIC1.95□□□□□ -2.1
VTNP04004 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
VTNP04004 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.95□□□□□ -2.1
VTNP04004 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
VTNP04004 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.94□□□□□ -2.1
VTNP04004 MIR369-201ENST00000362155 70 ntBASIC1.94□□□□□ -2.1
VTNP04004 RNU6-490P-201ENST00000362985 107 ntBASIC1.94□□□□□ -2.1
VTNP04004 SNORD115-3-201ENST00000363100 82 ntBASIC1.94□□□□□ -2.1
VTNP04004 RNU4-52P-201ENST00000384209 138 ntBASIC1.94□□□□□ -2.1
VTNP04004 Y_RNA.460-201ENST00000384255 102 ntBASIC1.94□□□□□ -2.1
VTNP04004 Y_RNA.605-201ENST00000410577 105 ntBASIC1.94□□□□□ -2.1
VTNP04004 AF228730.4-201ENST00000421457 183 ntBASIC1.94□□□□□ -2.1
VTNP04004 HMGN2P38-201ENST00000423806 265 ntBASIC1.94□□□□□ -2.1
VTNP04004 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
VTNP04004 USP9YP16-201ENST00000430287 407 ntBASIC1.94□□□□□ -2.1
VTNP04004 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.94□□□□□ -2.1
VTNP04004 USP9YP23-201ENST00000455085 407 ntBASIC1.94□□□□□ -2.1
VTNP04004 HMGN1P13-201ENST00000505795 138 ntBASIC1.94□□□□□ -2.1
VTNP04004 SNORA25.14-201ENST00000516481 132 ntBASIC1.94□□□□□ -2.1
VTNP04004 RNU6-1198P-201ENST00000516904 67 ntBASIC1.94□□□□□ -2.1
VTNP04004 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.94□□□□□ -2.1
VTNP04004 MIR4529-201ENST00000578110 78 ntBASIC1.94□□□□□ -2.1
VTNP04004 MIR3683-201ENST00000580847 82 ntBASIC1.94□□□□□ -2.1
VTNP04004 MIR5694-201ENST00000581190 76 ntBASIC1.94□□□□□ -2.1
VTNP04004 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.94□□□□□ -2.1
VTNP04004 AL031274.2-201ENST00000599419 203 ntBASIC1.94□□□□□ -2.1
VTNP04004 AP000942.3-201ENST00000603702 160 ntBASIC1.94□□□□□ -2.1
VTNP04004 SNRPGP17-201ENST00000603780 214 ntBASIC1.94□□□□□ -2.1
VTNP04004 AL132822.1-201ENST00000617063 513 ntBASIC1.94□□□□□ -2.1
VTNP04004 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
VTNP04004 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
VTNP04004 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
VTNP04004 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
VTNP04004 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.93□□□□□ -2.1
VTNP04004 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.93□□□□□ -2.1
VTNP04004 RNU6-874P-201ENST00000362390 105 ntBASIC1.93□□□□□ -2.1
VTNP04004 Y_RNA.315-201ENST00000365117 102 ntBASIC1.93□□□□□ -2.1
VTNP04004 RNU6-234P-201ENST00000365229 104 ntBASIC1.93□□□□□ -2.1
VTNP04004 RNU6-438P-201ENST00000365561 103 ntBASIC1.93□□□□□ -2.1
VTNP04004 RNU6-1026P-201ENST00000384465 108 ntBASIC1.93□□□□□ -2.1
VTNP04004 MIR625-201ENST00000385047 85 ntBASIC1.93□□□□□ -2.1
VTNP04004 MIR559-201ENST00000385188 96 ntBASIC1.93□□□□□ -2.1
VTNP04004 RPS26P42-201ENST00000413485 326 ntBASIC1.93□□□□□ -2.1
VTNP04004 MRPS18CP6-201ENST00000423587 223 ntBASIC1.93□□□□□ -2.1
VTNP04004 AC108667.1-201ENST00000428618 249 ntBASIC1.93□□□□□ -2.1
VTNP04004 AC096644.2-201ENST00000429278 159 ntBASIC1.93□□□□□ -2.1
VTNP04004 HMGN2P18-201ENST00000450680 270 ntBASIC1.93□□□□□ -2.1
VTNP04004 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.93□□□□□ -2.1
VTNP04004 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.93□□□□□ -2.1
VTNP04004 AC132942.1-201ENST00000486753 483 ntBASIC1.93□□□□□ -2.1
VTNP04004 RNA5SP54-201ENST00000516951 92 ntBASIC1.93□□□□□ -2.1
VTNP04004 RNA5SP490-201ENST00000517141 136 ntBASIC1.93□□□□□ -2.1
VTNP04004 DEFB131C-201ENST00000528817 165 ntBASIC1.93□□□□□ -2.1
VTNP04004 AC027288.2-201ENST00000553028 243 ntBASIC1.93□□□□□ -2.1
VTNP04004 AC078899.2-201ENST00000595282 212 ntBASIC1.93□□□□□ -2.1
VTNP04004 AC005296.1-201ENST00000616145 209 ntBASIC1.93□□□□□ -2.1
VTNP04004 AL359314.1-201ENST00000616913 261 ntBASIC1.93□□□□□ -2.1
VTNP04004 AC090971.5-201ENST00000621102 293 ntBASIC1.93□□□□□ -2.1
VTNP04004 MTND4P1-201ENST00000457501 1466 ntBASIC1.93□□□□□ -2.1
VTNP04004 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.92□□□□□ -2.1
VTNP04004 RNU6-727P-201ENST00000363592 107 ntBASIC1.92□□□□□ -2.1
VTNP04004 RNU6-873P-201ENST00000363833 107 ntBASIC1.92□□□□□ -2.1
VTNP04004 RNU6-457P-201ENST00000363999 107 ntBASIC1.92□□□□□ -2.1
VTNP04004 Y_RNA.364-201ENST00000365532 101 ntBASIC1.92□□□□□ -2.1
VTNP04004 SNORA6-201ENST00000384033 151 ntBASIC1.92□□□□□ -2.1
VTNP04004 Y_RNA.428-201ENST00000384078 102 ntBASIC1.92□□□□□ -2.1
VTNP04004 RNU6-611P-201ENST00000384276 104 ntBASIC1.92□□□□□ -2.1
VTNP04004 Y_RNA.557-201ENST00000384680 107 ntBASIC1.92□□□□□ -2.1
VTNP04004 Y_RNA.577-201ENST00000384794 101 ntBASIC1.92□□□□□ -2.1
VTNP04004 HMGN2P39-201ENST00000398005 273 ntBASIC1.92□□□□□ -2.1
VTNP04004 AC114482.1-201ENST00000418010 247 ntBASIC1.92□□□□□ -2.1
VTNP04004 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.92□□□□□ -2.1
VTNP04004 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.92□□□□□ -2.1
VTNP04004 AL137159.1-201ENST00000452808 512 ntBASIC1.92□□□□□ -2.1
VTNP04004 RNU7-152P-201ENST00000458982 64 ntBASIC1.92□□□□□ -2.1
VTNP04004 AC007215.1-201ENST00000464893 276 ntBASIC1.92□□□□□ -2.1
VTNP04004 AC055731.1-201ENST00000474387 401 ntBASIC1.92□□□□□ -2.1
VTNP04004 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.92□□□□□ -2.1
VTNP04004 RNU1-117P-201ENST00000517041 158 ntBASIC1.92□□□□□ -2.1
VTNP04004 SNORD116.3-201ENST00000517176 78 ntBASIC1.92□□□□□ -2.1
VTNP04004 RNU2-19P-201ENST00000517288 84 ntBASIC1.92□□□□□ -2.1
VTNP04004 AC022868.1-201ENST00000517767 391 ntBASIC1.92□□□□□ -2.1
VTNP04004 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.92□□□□□ -2.1
VTNP04004 SUB1P3-201ENST00000564581 315 ntBASIC1.92□□□□□ -2.1
VTNP04004 MIR4419B-201ENST00000577260 68 ntBASIC1.92□□□□□ -2.1
VTNP04004 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.92□□□□□ -2.1
VTNP04004 TCL6_2.1-201ENST00000615162 119 ntBASIC1.92□□□□□ -2.1
VTNP04004 AL160413.1-201ENST00000622780 310 ntBASIC1.92□□□□□ -2.1
VTNP04004 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.92□□□□□ -2.1
VTNP04004 RNU6-545P-201ENST00000362681 104 ntBASIC1.91□□□□□ -2.1
VTNP04004 RNU6-879P-201ENST00000364328 108 ntBASIC1.91□□□□□ -2.1
VTNP04004 Y_RNA.463-201ENST00000384271 102 ntBASIC1.91□□□□□ -2.1
VTNP04004 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
VTNP04004 SNORA40.19-201ENST00000390846 128 ntBASIC1.91□□□□□ -2.1
VTNP04004 SNORA69.1-201ENST00000390904 137 ntBASIC1.91□□□□□ -2.1
VTNP04004 RNU6-159P-201ENST00000391080 106 ntBASIC1.91□□□□□ -2.1
VTNP04004 AL355497.1-201ENST00000406262 551 ntBASIC1.91□□□□□ -2.1
VTNP04004 AL357139.1-201ENST00000407792 426 ntBASIC1.91□□□□□ -2.1
VTNP04004 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.91□□□□□ -2.1
VTNP04004 PRELID3BP1-201ENST00000457142 540 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms