Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AL357312.1-201ENST00000603879 298 ntBASIC0.25□□□□□ -2.37
COL1A1P02452 PRELID3BP2-201ENST00000605362 201 ntBASIC0.25□□□□□ -2.37
COL1A1P02452 RNU4-5P-201ENST00000607255 135 ntBASIC0.25□□□□□ -2.37
COL1A1P02452 AP001596.2-201ENST00000608410 312 ntBASIC0.25□□□□□ -2.37
COL1A1P02452 AC138749.5-201ENST00000611461 208 ntBASIC0.25□□□□□ -2.37
COL1A1P02452 AC116165.2-201ENST00000616705 206 ntBASIC0.25□□□□□ -2.37
COL1A1P02452 AL513423.1-201ENST00000621695 132 ntBASIC0.25□□□□□ -2.37
COL1A1P02452 RNA5SP98-201ENST00000363158 137 ntBASIC0.24□□□□□ -2.37
COL1A1P02452 SNORA33-201ENST00000363664 130 ntBASIC0.24□□□□□ -2.37
COL1A1P02452 RNU6-1240P-201ENST00000365155 104 ntBASIC0.24□□□□□ -2.37
COL1A1P02452 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
COL1A1P02452 SNORA36A-201ENST00000384221 132 ntBASIC0.24□□□□□ -2.37
COL1A1P02452 Y_RNA.572-201ENST00000384757 98 ntBASIC0.24□□□□□ -2.37
COL1A1P02452 AL451046.2-201ENST00000403074 277 ntBASIC0.24□□□□□ -2.37
COL1A1P02452 AL365184.2-201ENST00000431139 435 ntBASIC0.24□□□□□ -2.37
COL1A1P02452 AC004386.2-201ENST00000441858 148 ntBASIC0.24□□□□□ -2.37
COL1A1P02452 AL133217.1-201ENST00000450980 425 ntBASIC0.24□□□□□ -2.37
COL1A1P02452 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.24□□□□□ -2.37
COL1A1P02452 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.24□□□□□ -2.37
COL1A1P02452 HMGB1P29-201ENST00000505659 499 ntBASIC0.24□□□□□ -2.37
COL1A1P02452 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.24□□□□□ -2.37
COL1A1P02452 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.24□□□□□ -2.37
COL1A1P02452 AC016256.1-201ENST00000547971 354 ntBASIC0.24□□□□□ -2.37
COL1A1P02452 AC090049.2-201ENST00000550377 109 ntBASIC0.24□□□□□ -2.37
COL1A1P02452 AC025627.3-201ENST00000582078 182 ntBASIC0.24□□□□□ -2.37
COL1A1P02452 MIR3941-201ENST00000582572 103 ntBASIC0.24□□□□□ -2.37
COL1A1P02452 AL158050.2-201ENST00000605336 568 ntBASIC0.24□□□□□ -2.37
COL1A1P02452 AC018645.2-201ENST00000609151 472 ntBASIC0.24□□□□□ -2.37
COL1A1P02452 AL359075.3-201ENST00000613288 217 ntBASIC0.24□□□□□ -2.37
COL1A1P02452 AL603839.4-201ENST00000624658 1005 ntBASIC0.24□□□□□ -2.37
COL1A1P02452 AC006927.3-201ENST00000638789 384 ntBASIC0.24□□□□□ -2.37
COL1A1P02452 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.24□□□□□ -2.37
COL1A1P02452 RNU4-73P-201ENST00000363164 141 ntBASIC0.23□□□□□ -2.37
COL1A1P02452 RNU6-923P-201ENST00000364753 107 ntBASIC0.23□□□□□ -2.37
COL1A1P02452 RNU4-48P-201ENST00000365559 182 ntBASIC0.23□□□□□ -2.37
COL1A1P02452 SNORA8.3-201ENST00000384679 139 ntBASIC0.23□□□□□ -2.37
COL1A1P02452 MIR549A-201ENST00000385268 96 ntBASIC0.23□□□□□ -2.37
COL1A1P02452 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
COL1A1P02452 AL355796.1-201ENST00000406706 323 ntBASIC0.23□□□□□ -2.37
COL1A1P02452 AL117339.3-201ENST00000418733 162 ntBASIC0.23□□□□□ -2.37
COL1A1P02452 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.23□□□□□ -2.37
COL1A1P02452 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.23□□□□□ -2.37
COL1A1P02452 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.23□□□□□ -2.37
COL1A1P02452 RPEP5-201ENST00000441137 268 ntBASIC0.23□□□□□ -2.37
COL1A1P02452 AL606517.2-201ENST00000442855 241 ntBASIC0.23□□□□□ -2.37
COL1A1P02452 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.23□□□□□ -2.37
COL1A1P02452 SNRPGP12-201ENST00000449481 213 ntBASIC0.23□□□□□ -2.37
COL1A1P02452 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.23□□□□□ -2.37
COL1A1P02452 RNU7-182P-201ENST00000459009 62 ntBASIC0.23□□□□□ -2.37
COL1A1P02452 RNU7-21P-201ENST00000459430 62 ntBASIC0.23□□□□□ -2.37
COL1A1P02452 AC091874.1-201ENST00000511402 339 ntBASIC0.23□□□□□ -2.37
COL1A1P02452 RNA5SP134-201ENST00000516492 96 ntBASIC0.23□□□□□ -2.37
COL1A1P02452 RNU6-1069P-201ENST00000516612 133 ntBASIC0.23□□□□□ -2.37
COL1A1P02452 AC026470.2-201ENST00000561492 181 ntBASIC0.23□□□□□ -2.37
COL1A1P02452 AC004584.2-201ENST00000570407 410 ntBASIC0.23□□□□□ -2.37
COL1A1P02452 RSL24D1P11-201ENST00000591045 491 ntBASIC0.23□□□□□ -2.37
COL1A1P02452 AL390123.1-201ENST00000603216 237 ntBASIC0.23□□□□□ -2.37
COL1A1P02452 Z99497.2-201ENST00000603634 310 ntBASIC0.23□□□□□ -2.37
COL1A1P02452 AP000811.1-201ENST00000603803 651 ntBASIC0.23□□□□□ -2.37
COL1A1P02452 AP000907.4-201ENST00000604143 237 ntBASIC0.23□□□□□ -2.37
COL1A1P02452 AC022217.4-201ENST00000604389 163 ntBASIC0.23□□□□□ -2.37
COL1A1P02452 SNRPGP20-201ENST00000604477 205 ntBASIC0.23□□□□□ -2.37
COL1A1P02452 AL360219.1-201ENST00000610230 366 ntBASIC0.23□□□□□ -2.37
COL1A1P02452 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.23□□□□□ -2.37
COL1A1P02452 AC005562.2-201ENST00000618264 111 ntBASIC0.23□□□□□ -2.37
COL1A1P02452 AC068792.1-201ENST00000621354 417 ntBASIC0.23□□□□□ -2.37
COL1A1P02452 MIR6516-201ENST00000630554 81 ntBASIC0.23□□□□□ -2.37
COL1A1P02452 RNU6-199P-201ENST00000362954 107 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 RNU6-1305P-201ENST00000364353 104 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 RNU6-505P-201ENST00000384427 107 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 MIR604-201ENST00000384880 94 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 MRPL42P3-201ENST00000401492 326 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 TIMM9P3-201ENST00000428659 274 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 AC092423.1-201ENST00000430165 186 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.22□□□□□ -2.37
COL1A1P02452 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.22□□□□□ -2.37
COL1A1P02452 AC022364.2-201ENST00000457963 554 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 U7.7-201ENST00000459276 60 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 RNU7-94P-201ENST00000459576 63 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.22□□□□□ -2.37
COL1A1P02452 AC025465.4-201ENST00000513422 638 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 SCARNA24.1-201ENST00000516465 137 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 AC069113.1-201ENST00000517763 267 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 AC090572.1-201ENST00000519251 160 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.22□□□□□ -2.37
COL1A1P02452 MIR4775-201ENST00000581168 75 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 AC240442.1-201ENST00000616055 283 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 AC073349.3-201ENST00000617616 186 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 AC022418.1-201ENST00000624118 445 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.22□□□□□ -2.37
COL1A1P02452 SNORA43.4-201ENST00000629559 138 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 SEPT14P19-203ENST00000633205 211 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 MTND4P9-201ENST00000507819 1346 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 RNU6-1303P-201ENST00000364841 107 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 RNU5E-5P-201ENST00000365379 116 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 SNORA2.2-201ENST00000365473 135 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 RNU6-906P-201ENST00000384700 70 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 MIR586-201ENST00000385035 97 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms