Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
GGPS1O95749 Y_RNA.490-201ENST00000384413 102 ntBASIC1.84□□□□□ -2.11
GGPS1O95749 Y_RNA.533-201ENST00000384596 114 ntBASIC1.84□□□□□ -2.11
GGPS1O95749 RPL21P111-201ENST00000418453 477 ntBASIC1.84□□□□□ -2.11
GGPS1O95749 USP9YP30-201ENST00000430729 455 ntBASIC1.84□□□□□ -2.11
GGPS1O95749 AC112492.4-201ENST00000456549 352 ntBASIC1.84□□□□□ -2.11
GGPS1O95749 SNORD5.1-201ENST00000458800 75 ntBASIC1.84□□□□□ -2.11
GGPS1O95749 MTND5P5-201ENST00000503764 376 ntBASIC1.84□□□□□ -2.11
GGPS1O95749 AC108729.3-201ENST00000513484 108 ntBASIC1.84□□□□□ -2.11
GGPS1O95749 RNU6-358P-201ENST00000516564 75 ntBASIC1.84□□□□□ -2.11
GGPS1O95749 AL078596.1-201ENST00000624856 447 ntBASIC1.84□□□□□ -2.11
GGPS1O95749 RNU6-1059P-201ENST00000363752 98 ntBASIC1.83□□□□□ -2.12
GGPS1O95749 FGF7P8-201ENST00000402994 292 ntBASIC1.83□□□□□ -2.12
GGPS1O95749 RNA5SP504-201ENST00000410676 117 ntBASIC1.83□□□□□ -2.12
GGPS1O95749 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.83□□□□□ -2.12
GGPS1O95749 RPL30P16-201ENST00000419341 429 ntBASIC1.83□□□□□ -2.12
GGPS1O95749 RPL31P63-201ENST00000422565 375 ntBASIC1.83□□□□□ -2.12
GGPS1O95749 AC245047.4-201ENST00000433189 144 ntBASIC1.83□□□□□ -2.12
GGPS1O95749 HSPE1P21-201ENST00000438283 308 ntBASIC1.83□□□□□ -2.12
GGPS1O95749 AC008834.1-201ENST00000511612 175 ntBASIC1.83□□□□□ -2.12
GGPS1O95749 Y_RNA.682-201ENST00000516457 100 ntBASIC1.83□□□□□ -2.12
GGPS1O95749 RNA5SP384-201ENST00000516615 116 ntBASIC1.83□□□□□ -2.12
GGPS1O95749 SNORA44.1-201ENST00000517031 108 ntBASIC1.83□□□□□ -2.12
GGPS1O95749 MIR3198-2-201ENST00000577868 80 ntBASIC1.83□□□□□ -2.12
GGPS1O95749 snoU13.31-201ENST00000607291 104 ntBASIC1.83□□□□□ -2.12
GGPS1O95749 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.83□□□□□ -2.12
GGPS1O95749 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.83□□□□□ -2.12
GGPS1O95749 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
GGPS1O95749 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.83□□□□□ -2.12
GGPS1O95749 RNU1-62P-201ENST00000362599 164 ntBASIC1.82□□□□□ -2.12
GGPS1O95749 RNU6-873P-201ENST00000363833 107 ntBASIC1.82□□□□□ -2.12
GGPS1O95749 RNU6-595P-201ENST00000363944 107 ntBASIC1.82□□□□□ -2.12
GGPS1O95749 RNU1-96P-201ENST00000364163 162 ntBASIC1.82□□□□□ -2.12
GGPS1O95749 RNU6-1019P-201ENST00000364424 107 ntBASIC1.82□□□□□ -2.12
GGPS1O95749 RNU6-842P-201ENST00000384269 107 ntBASIC1.82□□□□□ -2.12
GGPS1O95749 Y_RNA.505-201ENST00000384489 102 ntBASIC1.82□□□□□ -2.12
GGPS1O95749 RNU6-541P-201ENST00000384709 110 ntBASIC1.82□□□□□ -2.12
GGPS1O95749 MTND3P8-201ENST00000412909 339 ntBASIC1.82□□□□□ -2.12
GGPS1O95749 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.82□□□□□ -2.12
GGPS1O95749 RNU7-175P-201ENST00000515915 61 ntBASIC1.82□□□□□ -2.12
GGPS1O95749 RNU1-117P-201ENST00000517041 158 ntBASIC1.82□□□□□ -2.12
GGPS1O95749 AC134698.4-201ENST00000523451 826 ntBASIC1.82□□□□□ -2.12
GGPS1O95749 AL590705.4-201ENST00000532209 134 ntBASIC1.82□□□□□ -2.12
GGPS1O95749 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.82□□□□□ -2.12
GGPS1O95749 AL133216.2-202ENST00000634512 349 ntBASIC1.82□□□□□ -2.12
GGPS1O95749 MIR338-201ENST00000636369 67 ntBASIC1.82□□□□□ -2.12
GGPS1O95749 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.82□□□□□ -2.12
GGPS1O95749 Y_RNA.72-201ENST00000362894 103 ntBASIC1.81□□□□□ -2.12
GGPS1O95749 RNU6-439P-201ENST00000384188 106 ntBASIC1.81□□□□□ -2.12
GGPS1O95749 MIR520A-201ENST00000384862 85 ntBASIC1.81□□□□□ -2.12
GGPS1O95749 MIR30A-201ENST00000385092 71 ntBASIC1.81□□□□□ -2.12
GGPS1O95749 RNU6-159P-201ENST00000391080 106 ntBASIC1.81□□□□□ -2.12
GGPS1O95749 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.81□□□□□ -2.12
GGPS1O95749 RN7SKP101-201ENST00000411376 320 ntBASIC1.81□□□□□ -2.12
GGPS1O95749 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.81□□□□□ -2.12
GGPS1O95749 AP1B1P2-201ENST00000416196 106 ntBASIC1.81□□□□□ -2.12
GGPS1O95749 CST2P1-201ENST00000425770 87 ntBASIC1.81□□□□□ -2.12
GGPS1O95749 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.81□□□□□ -2.12
GGPS1O95749 RNU7-57P-201ENST00000459540 60 ntBASIC1.81□□□□□ -2.12
GGPS1O95749 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.81□□□□□ -2.12
GGPS1O95749 SNORA25.14-201ENST00000516481 132 ntBASIC1.81□□□□□ -2.12
GGPS1O95749 AL645939.4-201ENST00000604495 135 ntBASIC1.81□□□□□ -2.12
GGPS1O95749 AC084782.3-201ENST00000612282 578 ntBASIC1.81□□□□□ -2.12
GGPS1O95749 U6atac.1-201ENST00000616025 117 ntBASIC1.81□□□□□ -2.12
GGPS1O95749 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.81□□□□□ -2.12
GGPS1O95749 AC126177.8-201ENST00000618339 1015 ntBASIC1.81□□□□□ -2.12
GGPS1O95749 AC068205.3-201ENST00000636385 468 ntBASIC1.81□□□□□ -2.12
GGPS1O95749 MTND4P12-201ENST00000498999 1377 ntBASIC1.81□□□□□ -2.12
GGPS1O95749 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
GGPS1O95749 AC010615.1-201ENST00000594254 1764 ntBASIC1.8□□□□□ -2.12
GGPS1O95749 snoU2-30.2-201ENST00000362805 70 ntBASIC1.8□□□□□ -2.12
GGPS1O95749 RNU6-280P-201ENST00000364145 104 ntBASIC1.8□□□□□ -2.12
GGPS1O95749 RNU6-593P-201ENST00000364716 112 ntBASIC1.8□□□□□ -2.12
GGPS1O95749 MIR548K-201ENST00000408406 116 ntBASIC1.8□□□□□ -2.12
GGPS1O95749 RNU6-57P-201ENST00000411348 103 ntBASIC1.8□□□□□ -2.12
GGPS1O95749 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.8□□□□□ -2.12
GGPS1O95749 AC018710.1-201ENST00000506509 158 ntBASIC1.8□□□□□ -2.12
GGPS1O95749 AC025465.3-201ENST00000510570 311 ntBASIC1.8□□□□□ -2.12
GGPS1O95749 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.8□□□□□ -2.12
GGPS1O95749 RNU6-1053P-201ENST00000515930 101 ntBASIC1.8□□□□□ -2.12
GGPS1O95749 RNU6-1016P-201ENST00000516689 94 ntBASIC1.8□□□□□ -2.12
GGPS1O95749 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.8□□□□□ -2.12
GGPS1O95749 MTND4LP26-201ENST00000518144 282 ntBASIC1.8□□□□□ -2.12
GGPS1O95749 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.8□□□□□ -2.12
GGPS1O95749 SNORD53B-201ENST00000577887 78 ntBASIC1.8□□□□□ -2.12
GGPS1O95749 AC018462.2-201ENST00000605375 395 ntBASIC1.8□□□□□ -2.12
GGPS1O95749 snoZ196.1-201ENST00000625269 89 ntBASIC1.8□□□□□ -2.12
GGPS1O95749 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
GGPS1O95749 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.8□□□□□ -2.12
GGPS1O95749 RNU5F-3P-201ENST00000363767 117 ntBASIC1.79□□□□□ -2.12
GGPS1O95749 RNU1-42P-201ENST00000364033 160 ntBASIC1.79□□□□□ -2.12
GGPS1O95749 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.79□□□□□ -2.12
GGPS1O95749 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.79□□□□□ -2.12
GGPS1O95749 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
GGPS1O95749 USMG5P1-201ENST00000425964 177 ntBASIC1.79□□□□□ -2.12
GGPS1O95749 AC026782.1-201ENST00000512952 449 ntBASIC1.79□□□□□ -2.12
GGPS1O95749 AC084364.2-201ENST00000546924 395 ntBASIC1.79□□□□□ -2.12
GGPS1O95749 UBL5P4-201ENST00000562584 236 ntBASIC1.79□□□□□ -2.12
GGPS1O95749 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.79□□□□□ -2.12
GGPS1O95749 AC011712.1-201ENST00000588959 234 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms