Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
RNF40O75150 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNF40O75150 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNF40O75150 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.42□□□□□ -1.7
RNF40O75150 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNF40O75150 RNU6-50P-201ENST00000362356 103 ntBASIC4.42□□□□□ -1.7
RNF40O75150 MIR147B-201ENST00000390185 80 ntBASIC4.42□□□□□ -1.7
RNF40O75150 MIR1255A-201ENST00000408338 113 ntBASIC4.42□□□□□ -1.7
RNF40O75150 RN7SKP202-201ENST00000410439 330 ntBASIC4.42□□□□□ -1.7
RNF40O75150 AC016717.1-201ENST00000448918 286 ntBASIC4.42□□□□□ -1.7
RNF40O75150 RN7SL812P-201ENST00000493791 279 ntBASIC4.42□□□□□ -1.7
RNF40O75150 AC097462.1-201ENST00000514125 324 ntBASIC4.42□□□□□ -1.7
RNF40O75150 AC096725.1-201ENST00000514266 313 ntBASIC4.42□□□□□ -1.7
RNF40O75150 RNA5SP519-201ENST00000516480 119 ntBASIC4.42□□□□□ -1.7
RNF40O75150 AC011604.1-201ENST00000545978 196 ntBASIC4.42□□□□□ -1.7
RNF40O75150 AC079598.5-201ENST00000547460 117 ntBASIC4.42□□□□□ -1.7
RNF40O75150 MIR3117-201ENST00000584034 78 ntBASIC4.42□□□□□ -1.7
RNF40O75150 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.42□□□□□ -1.7
RNF40O75150 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RNF40O75150 AC096577.2-201ENST00000611455 153 ntBASIC4.42□□□□□ -1.7
RNF40O75150 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
RNF40O75150 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNF40O75150 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNF40O75150 MFSD8-236ENST00000641509 4050 ntBASIC4.41□□□□□ -1.7
RNF40O75150 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.41□□□□□ -1.7
RNF40O75150 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.41□□□□□ -1.7
RNF40O75150 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RNF40O75150 RNU6-414P-201ENST00000363705 104 ntBASIC4.41□□□□□ -1.7
RNF40O75150 AL162151.2-201ENST00000448875 158 ntBASIC4.41□□□□□ -1.7
RNF40O75150 AC112771.1-201ENST00000463581 102 ntBASIC4.41□□□□□ -1.7
RNF40O75150 RNU6-1270P-201ENST00000517128 108 ntBASIC4.41□□□□□ -1.7
RNF40O75150 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RNF40O75150 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RNF40O75150 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RNF40O75150 AL133412.1-201ENST00000380194 2992 ntBASIC4.41□□□□□ -1.7
RNF40O75150 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
RNF40O75150 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RNF40O75150 AL672296.1-201ENST00000427780 2158 ntBASIC4.4□□□□□ -1.7
RNF40O75150 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.4□□□□□ -1.7
RNF40O75150 RNA5SP130-201ENST00000364431 114 ntBASIC4.4□□□□□ -1.71
RNF40O75150 MIR554-201ENST00000384874 96 ntBASIC4.4□□□□□ -1.71
RNF40O75150 MIR23A-201ENST00000385245 73 ntBASIC4.4□□□□□ -1.71
RNF40O75150 RNA5SP129-201ENST00000410276 118 ntBASIC4.4□□□□□ -1.71
RNF40O75150 ATP6V0E1P1-201ENST00000412537 226 ntBASIC4.4□□□□□ -1.71
RNF40O75150 RNU7-14P-201ENST00000459331 62 ntBASIC4.4□□□□□ -1.71
RNF40O75150 RN7SL542P-201ENST00000467147 294 ntBASIC4.4□□□□□ -1.71
RNF40O75150 S100A11P1-201ENST00000477525 312 ntBASIC4.4□□□□□ -1.71
RNF40O75150 AC005921.1-201ENST00000510589 286 ntBASIC4.4□□□□□ -1.71
RNF40O75150 SNORA67.7-201ENST00000516664 135 ntBASIC4.4□□□□□ -1.71
RNF40O75150 RNU1-45P-201ENST00000517191 141 ntBASIC4.4□□□□□ -1.71
RNF40O75150 RN7SKP289-201ENST00000517244 295 ntBASIC4.4□□□□□ -1.71
RNF40O75150 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.4□□□□□ -1.71
RNF40O75150 MIR4286-201ENST00000580651 93 ntBASIC4.4□□□□□ -1.71
RNF40O75150 MIR6875-201ENST00000617506 72 ntBASIC4.4□□□□□ -1.71
RNF40O75150 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
RNF40O75150 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.4□□□□□ -1.71
RNF40O75150 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.4□□□□□ -1.71
RNF40O75150 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.39□□□□□ -1.71
RNF40O75150 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF40O75150 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RNF40O75150 RNU1-14P-201ENST00000362759 152 ntBASIC4.39□□□□□ -1.71
RNF40O75150 RNU6-486P-201ENST00000363116 107 ntBASIC4.39□□□□□ -1.71
RNF40O75150 RNA5SP175-201ENST00000364275 119 ntBASIC4.39□□□□□ -1.71
RNF40O75150 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RNF40O75150 AL157831.1-201ENST00000426134 473 ntBASIC4.39□□□□□ -1.71
RNF40O75150 snoU13.28-201ENST00000459235 104 ntBASIC4.39□□□□□ -1.71
RNF40O75150 RNA5SP57-201ENST00000459463 123 ntBASIC4.39□□□□□ -1.71
RNF40O75150 AP000873.1-201ENST00000463987 400 ntBASIC4.39□□□□□ -1.71
RNF40O75150 RPL35AP15-201ENST00000468042 339 ntBASIC4.39□□□□□ -1.71
RNF40O75150 AC006445.1-201ENST00000491925 405 ntBASIC4.39□□□□□ -1.71
RNF40O75150 RN7SL604P-201ENST00000492589 296 ntBASIC4.39□□□□□ -1.71
RNF40O75150 MIR5197-201ENST00000583721 112 ntBASIC4.39□□□□□ -1.71
RNF40O75150 RNU1-30P-201ENST00000606575 163 ntBASIC4.39□□□□□ -1.71
RNF40O75150 JPX_2.1-201ENST00000614161 69 ntBASIC4.39□□□□□ -1.71
RNF40O75150 MIR7702-201ENST00000621931 59 ntBASIC4.39□□□□□ -1.71
RNF40O75150 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF40O75150 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.39□□□□□ -1.71
RNF40O75150 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.39□□□□□ -1.71
RNF40O75150 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.39□□□□□ -1.71
RNF40O75150 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF40O75150 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RNF40O75150 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.38□□□□□ -1.71
RNF40O75150 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF40O75150 SNORA62.3-201ENST00000365110 153 ntBASIC4.38□□□□□ -1.71
RNF40O75150 RNA5SP171-201ENST00000391071 115 ntBASIC4.38□□□□□ -1.71
RNF40O75150 RPL21P65-201ENST00000406094 466 ntBASIC4.38□□□□□ -1.71
RNF40O75150 EIF4EP4-201ENST00000424916 578 ntBASIC4.38□□□□□ -1.71
RNF40O75150 RPS27P22-201ENST00000478056 241 ntBASIC4.38□□□□□ -1.71
RNF40O75150 AC022137.1-201ENST00000483735 151 ntBASIC4.38□□□□□ -1.71
RNF40O75150 AC023141.12-201ENST00000512399 199 ntBASIC4.38□□□□□ -1.71
RNF40O75150 MIR3158-1-201ENST00000583596 81 ntBASIC4.38□□□□□ -1.71
RNF40O75150 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF40O75150 UBE3AP2-201ENST00000429033 2259 ntBASIC4.38□□□□□ -1.71
RNF40O75150 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF40O75150 SNORA31-201ENST00000362607 130 ntBASIC4.37□□□□□ -1.71
RNF40O75150 Y_RNA.290-201ENST00000364879 114 ntBASIC4.37□□□□□ -1.71
RNF40O75150 RNA5SP189-201ENST00000364920 115 ntBASIC4.37□□□□□ -1.71
RNF40O75150 MIR548D2-201ENST00000384955 97 ntBASIC4.37□□□□□ -1.71
RNF40O75150 MIR670-201ENST00000390142 98 ntBASIC4.37□□□□□ -1.71
RNF40O75150 RNU6-750P-201ENST00000390946 107 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms