Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
ACTN4O43707 AC010733.2-201ENST00000589496 5702 ntBASIC4.35□□□□□ -1.71
ACTN4O43707 RNU6-414P-201ENST00000363705 104 ntBASIC4.35□□□□□ -1.71
ACTN4O43707 Y_RNA.213-201ENST00000364178 111 ntBASIC4.35□□□□□ -1.71
ACTN4O43707 RN7SL93P-201ENST00000463035 293 ntBASIC4.35□□□□□ -1.71
ACTN4O43707 MIR449C-201ENST00000516047 92 ntBASIC4.35□□□□□ -1.71
ACTN4O43707 SNORA31.9-201ENST00000516429 84 ntBASIC4.35□□□□□ -1.71
ACTN4O43707 AC141557.1-201ENST00000540982 400 ntBASIC4.35□□□□□ -1.71
ACTN4O43707 MIR4644-201ENST00000579929 84 ntBASIC4.35□□□□□ -1.71
ACTN4O43707 AC008739.2-201ENST00000597006 317 ntBASIC4.35□□□□□ -1.71
ACTN4O43707 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
ACTN4O43707 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
ACTN4O43707 AC010680.1-201ENST00000590024 3590 ntBASIC4.34□□□□□ -1.71
ACTN4O43707 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.34□□□□□ -1.71
ACTN4O43707 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.34□□□□□ -1.71
ACTN4O43707 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
ACTN4O43707 SNORA31-201ENST00000362607 130 ntBASIC4.34□□□□□ -1.71
ACTN4O43707 Y_RNA.78-201ENST00000362970 110 ntBASIC4.34□□□□□ -1.71
ACTN4O43707 RNU1-18P-201ENST00000363062 164 ntBASIC4.34□□□□□ -1.71
ACTN4O43707 MIR759-201ENST00000390224 91 ntBASIC4.34□□□□□ -1.71
ACTN4O43707 AL117342.1-201ENST00000404861 406 ntBASIC4.34□□□□□ -1.71
ACTN4O43707 RNA5SP317-201ENST00000410176 116 ntBASIC4.34□□□□□ -1.71
ACTN4O43707 RNA5SP311-201ENST00000411290 116 ntBASIC4.34□□□□□ -1.71
ACTN4O43707 AC008134.1-201ENST00000420943 193 ntBASIC4.34□□□□□ -1.71
ACTN4O43707 TRBV12-2-201ENST00000489763 344 ntBASIC4.34□□□□□ -1.71
ACTN4O43707 RNA5SP208-201ENST00000516156 78 ntBASIC4.34□□□□□ -1.71
ACTN4O43707 RNA5SP315-201ENST00000516340 116 ntBASIC4.34□□□□□ -1.71
ACTN4O43707 RNA5SP312-201ENST00000517068 116 ntBASIC4.34□□□□□ -1.71
ACTN4O43707 AC079598.5-201ENST00000547460 117 ntBASIC4.34□□□□□ -1.71
ACTN4O43707 AC110741.2-201ENST00000605278 268 ntBASIC4.34□□□□□ -1.71
ACTN4O43707 MIR378J-201ENST00000611988 109 ntBASIC4.34□□□□□ -1.71
ACTN4O43707 MIR6716-201ENST00000613413 80 ntBASIC4.34□□□□□ -1.71
ACTN4O43707 U6.73-201ENST00000619194 103 ntBASIC4.34□□□□□ -1.71
ACTN4O43707 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ACTN4O43707 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
ACTN4O43707 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ACTN4O43707 RNU6-750P-201ENST00000390946 107 ntBASIC4.33□□□□□ -1.72
ACTN4O43707 RPL21P65-201ENST00000406094 466 ntBASIC4.33□□□□□ -1.72
ACTN4O43707 MIR1294-201ENST00000408503 142 ntBASIC4.33□□□□□ -1.72
ACTN4O43707 RPL30P4-201ENST00000429309 333 ntBASIC4.33□□□□□ -1.72
ACTN4O43707 PGBD4P5-201ENST00000445958 426 ntBASIC4.33□□□□□ -1.72
ACTN4O43707 AC107297.1-201ENST00000459991 176 ntBASIC4.33□□□□□ -1.72
ACTN4O43707 RAC1P2-201ENST00000511164 579 ntBASIC4.33□□□□□ -1.72
ACTN4O43707 RNU6-240P-201ENST00000516098 97 ntBASIC4.33□□□□□ -1.72
ACTN4O43707 RNU6-948P-201ENST00000516374 107 ntBASIC4.33□□□□□ -1.72
ACTN4O43707 RNU6-1270P-201ENST00000517128 108 ntBASIC4.33□□□□□ -1.72
ACTN4O43707 AC026421.1-201ENST00000519101 163 ntBASIC4.33□□□□□ -1.72
ACTN4O43707 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.33□□□□□ -1.72
ACTN4O43707 MIR3117-201ENST00000584034 78 ntBASIC4.33□□□□□ -1.72
ACTN4O43707 AC020914.4-201ENST00000597690 277 ntBASIC4.33□□□□□ -1.72
ACTN4O43707 uc_338.32-201ENST00000615087 172 ntBASIC4.33□□□□□ -1.72
ACTN4O43707 AL590808.1-201ENST00000618696 141 ntBASIC4.33□□□□□ -1.72
ACTN4O43707 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
ACTN4O43707 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.33□□□□□ -1.72
ACTN4O43707 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.32□□□□□ -1.72
ACTN4O43707 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.32□□□□□ -1.72
ACTN4O43707 RNA5SP167-201ENST00000365461 116 ntBASIC4.32□□□□□ -1.72
ACTN4O43707 SNORD61-201ENST00000384252 73 ntBASIC4.32□□□□□ -1.72
ACTN4O43707 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.32□□□□□ -1.72
ACTN4O43707 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.32□□□□□ -1.72
ACTN4O43707 AP000873.1-201ENST00000463987 400 ntBASIC4.32□□□□□ -1.72
ACTN4O43707 AP002884.2-201ENST00000471647 395 ntBASIC4.32□□□□□ -1.72
ACTN4O43707 PPIAP15-201ENST00000479662 484 ntBASIC4.32□□□□□ -1.72
ACTN4O43707 RPS29P21-201ENST00000496272 170 ntBASIC4.32□□□□□ -1.72
ACTN4O43707 MRPS36P2-201ENST00000512569 299 ntBASIC4.32□□□□□ -1.72
ACTN4O43707 MIR2114-201ENST00000516645 80 ntBASIC4.32□□□□□ -1.72
ACTN4O43707 AL137849.1-201ENST00000604767 169 ntBASIC4.32□□□□□ -1.72
ACTN4O43707 AC013412.1-201ENST00000610687 192 ntBASIC4.32□□□□□ -1.72
ACTN4O43707 MIR6830-201ENST00000636015 70 ntBASIC4.32□□□□□ -1.72
ACTN4O43707 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
ACTN4O43707 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.32□□□□□ -1.72
ACTN4O43707 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.31□□□□□ -1.72
ACTN4O43707 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.31□□□□□ -1.72
ACTN4O43707 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
ACTN4O43707 RNU1-22P-201ENST00000363334 158 ntBASIC4.31□□□□□ -1.72
ACTN4O43707 RNU6-1240P-201ENST00000365155 104 ntBASIC4.31□□□□□ -1.72
ACTN4O43707 AL138878.1-201ENST00000405131 347 ntBASIC4.31□□□□□ -1.72
ACTN4O43707 AL031121.1-201ENST00000406553 254 ntBASIC4.31□□□□□ -1.72
ACTN4O43707 RNA5SP239-201ENST00000410218 129 ntBASIC4.31□□□□□ -1.72
ACTN4O43707 SNORA71B-202ENST00000439232 272 ntBASIC4.31□□□□□ -1.72
ACTN4O43707 MRPS17P9-201ENST00000511924 393 ntBASIC4.31□□□□□ -1.72
ACTN4O43707 AC090517.3-201ENST00000625170 141 ntBASIC4.31□□□□□ -1.72
ACTN4O43707 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ACTN4O43707 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.31□□□□□ -1.72
ACTN4O43707 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ACTN4O43707 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ACTN4O43707 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
ACTN4O43707 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ACTN4O43707 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
ACTN4O43707 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ACTN4O43707 MIR302B-201ENST00000362188 73 ntBASIC4.3□□□□□ -1.72
ACTN4O43707 SNORA62-201ENST00000365493 153 ntBASIC4.3□□□□□ -1.72
ACTN4O43707 RNU6-904P-201ENST00000516206 101 ntBASIC4.3□□□□□ -1.72
ACTN4O43707 SCARNA15-202ENST00000516881 127 ntBASIC4.3□□□□□ -1.72
ACTN4O43707 RNU7-172P-201ENST00000517125 64 ntBASIC4.3□□□□□ -1.72
ACTN4O43707 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC4.3□□□□□ -1.72
ACTN4O43707 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ACTN4O43707 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ACTN4O43707 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ACTN4O43707 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms