Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 RNA5SP454-201ENST00000517231 127 ntBASIC0.82□□□□□ -2.28
XRCC2O43543 AC007684.1-201ENST00000609671 477 ntBASIC0.82□□□□□ -2.28
XRCC2O43543 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.82□□□□□ -2.28
XRCC2O43543 SNORD3E-202ENST00000627253 216 ntBASIC0.82□□□□□ -2.28
XRCC2O43543 RNU1-36P-201ENST00000365130 165 ntBASIC0.81□□□□□ -2.28
XRCC2O43543 RNU4-66P-201ENST00000365199 138 ntBASIC0.81□□□□□ -2.28
XRCC2O43543 RNU6-784P-201ENST00000384330 106 ntBASIC0.81□□□□□ -2.28
XRCC2O43543 SNORA12.1-201ENST00000390873 148 ntBASIC0.81□□□□□ -2.28
XRCC2O43543 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
XRCC2O43543 MRPL42P3-201ENST00000401492 326 ntBASIC0.81□□□□□ -2.28
XRCC2O43543 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.81□□□□□ -2.28
XRCC2O43543 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.81□□□□□ -2.28
XRCC2O43543 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.81□□□□□ -2.28
XRCC2O43543 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.81□□□□□ -2.28
XRCC2O43543 AC048334.1-201ENST00000477975 159 ntBASIC0.81□□□□□ -2.28
XRCC2O43543 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.81□□□□□ -2.28
XRCC2O43543 HMGB1P29-201ENST00000505659 499 ntBASIC0.81□□□□□ -2.28
XRCC2O43543 RNA5SP401-201ENST00000515920 127 ntBASIC0.81□□□□□ -2.28
XRCC2O43543 SCARNA16.2-201ENST00000516520 172 ntBASIC0.81□□□□□ -2.28
XRCC2O43543 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.81□□□□□ -2.28
XRCC2O43543 CPDP1-201ENST00000579660 283 ntBASIC0.81□□□□□ -2.28
XRCC2O43543 AC073648.5-201ENST00000603502 305 ntBASIC0.81□□□□□ -2.28
XRCC2O43543 AL513534.2-201ENST00000603836 250 ntBASIC0.81□□□□□ -2.28
XRCC2O43543 AC080078.3-201ENST00000605407 463 ntBASIC0.81□□□□□ -2.28
XRCC2O43543 SNORD11B-201ENST00000607707 90 ntBASIC0.81□□□□□ -2.28
XRCC2O43543 AC073114.1-201ENST00000612027 490 ntBASIC0.81□□□□□ -2.28
XRCC2O43543 Y_RNA.1-201ENST00000352915 104 ntBASIC0.8□□□□□ -2.28
XRCC2O43543 RNU6-38P-201ENST00000384085 107 ntBASIC0.8□□□□□ -2.28
XRCC2O43543 RNU6-214P-201ENST00000384130 107 ntBASIC0.8□□□□□ -2.28
XRCC2O43543 AL034345.1-201ENST00000407768 123 ntBASIC0.8□□□□□ -2.28
XRCC2O43543 MTCO2P16-201ENST00000436962 677 ntBASIC0.8□□□□□ -2.28
XRCC2O43543 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.8□□□□□ -2.28
XRCC2O43543 MTCO1P29-201ENST00000496868 288 ntBASIC0.8□□□□□ -2.28
XRCC2O43543 TRMT112P2-201ENST00000512910 132 ntBASIC0.8□□□□□ -2.28
XRCC2O43543 SNORA31.4-201ENST00000516049 129 ntBASIC0.8□□□□□ -2.28
XRCC2O43543 ACA64.5-201ENST00000516207 127 ntBASIC0.8□□□□□ -2.28
XRCC2O43543 SNORA40.12-201ENST00000516329 111 ntBASIC0.8□□□□□ -2.28
XRCC2O43543 RN7SKP49-201ENST00000516675 260 ntBASIC0.8□□□□□ -2.28
XRCC2O43543 RNU7-128P-201ENST00000517247 62 ntBASIC0.8□□□□□ -2.28
XRCC2O43543 MTND1P5-201ENST00000517906 940 ntBASIC0.8□□□□□ -2.28
XRCC2O43543 LRRC34P1-201ENST00000542742 915 ntBASIC0.8□□□□□ -2.28
XRCC2O43543 MIR4498-201ENST00000577599 66 ntBASIC0.8□□□□□ -2.28
XRCC2O43543 MIR3124-201ENST00000582636 67 ntBASIC0.8□□□□□ -2.28
XRCC2O43543 MIR4760-201ENST00000585040 80 ntBASIC0.8□□□□□ -2.28
XRCC2O43543 AC016727.1-205ENST00000605437 569 ntBASIC0.8□□□□□ -2.28
XRCC2O43543 AC087752.4-201ENST00000605911 462 ntBASIC0.8□□□□□ -2.28
XRCC2O43543 AL513423.1-201ENST00000621695 132 ntBASIC0.8□□□□□ -2.28
XRCC2O43543 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
XRCC2O43543 OR4G1P-203ENST00000641984 1631 ntBASIC0.79□□□□□ -2.28
XRCC2O43543 RNU4-79P-201ENST00000362764 141 ntBASIC0.79□□□□□ -2.28
XRCC2O43543 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.79□□□□□ -2.28
XRCC2O43543 RNU6-933P-201ENST00000384424 107 ntBASIC0.79□□□□□ -2.28
XRCC2O43543 MIR532-201ENST00000385025 91 ntBASIC0.79□□□□□ -2.28
XRCC2O43543 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.79□□□□□ -2.28
XRCC2O43543 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.79□□□□□ -2.28
XRCC2O43543 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.79□□□□□ -2.28
XRCC2O43543 SNORD124-201ENST00000459577 104 ntBASIC0.79□□□□□ -2.28
XRCC2O43543 RPS3AP17-201ENST00000472594 777 ntBASIC0.79□□□□□ -2.28
XRCC2O43543 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.79□□□□□ -2.28
XRCC2O43543 Y_RNA.654-201ENST00000497848 106 ntBASIC0.79□□□□□ -2.28
XRCC2O43543 AC105758.1-201ENST00000506038 399 ntBASIC0.79□□□□□ -2.28
XRCC2O43543 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.79□□□□□ -2.28
XRCC2O43543 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.79□□□□□ -2.28
XRCC2O43543 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.79□□□□□ -2.28
XRCC2O43543 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
XRCC2O43543 RNU4-76P-201ENST00000364509 141 ntBASIC0.78□□□□□ -2.28
XRCC2O43543 SNORD87-201ENST00000364849 89 ntBASIC0.78□□□□□ -2.28
XRCC2O43543 Y_RNA.296-201ENST00000364930 108 ntBASIC0.78□□□□□ -2.28
XRCC2O43543 RNU4-20P-201ENST00000365601 151 ntBASIC0.78□□□□□ -2.28
XRCC2O43543 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
XRCC2O43543 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.78□□□□□ -2.28
XRCC2O43543 AC063976.4-201ENST00000421971 163 ntBASIC0.78□□□□□ -2.28
XRCC2O43543 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.78□□□□□ -2.28
XRCC2O43543 BET1P1-201ENST00000482276 359 ntBASIC0.78□□□□□ -2.28
XRCC2O43543 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.78□□□□□ -2.28
XRCC2O43543 RNU6-1053P-201ENST00000515930 101 ntBASIC0.78□□□□□ -2.28
XRCC2O43543 RNU6-1332P-201ENST00000516666 104 ntBASIC0.78□□□□□ -2.28
XRCC2O43543 Y_RNA.695-201ENST00000516715 107 ntBASIC0.78□□□□□ -2.28
XRCC2O43543 RNA5SP54-201ENST00000516951 92 ntBASIC0.78□□□□□ -2.28
XRCC2O43543 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.78□□□□□ -2.28
XRCC2O43543 AL137100.2-201ENST00000555786 315 ntBASIC0.78□□□□□ -2.28
XRCC2O43543 AC145350.1-201ENST00000567426 208 ntBASIC0.78□□□□□ -2.28
XRCC2O43543 AC004584.2-201ENST00000570407 410 ntBASIC0.78□□□□□ -2.28
XRCC2O43543 MIR4778-201ENST00000577635 80 ntBASIC0.78□□□□□ -2.28
XRCC2O43543 AC211469.2-201ENST00000605461 205 ntBASIC0.78□□□□□ -2.28
XRCC2O43543 AC092807.2-201ENST00000609367 243 ntBASIC0.78□□□□□ -2.28
XRCC2O43543 GHRLOS.1-201ENST00000610995 70 ntBASIC0.78□□□□□ -2.28
XRCC2O43543 MIR6857-201ENST00000613267 93 ntBASIC0.78□□□□□ -2.28
XRCC2O43543 AC073349.3-201ENST00000617616 186 ntBASIC0.78□□□□□ -2.28
XRCC2O43543 U6.73-201ENST00000619194 103 ntBASIC0.78□□□□□ -2.28
XRCC2O43543 RNU6-245P-201ENST00000384020 107 ntBASIC0.77□□□□□ -2.29
XRCC2O43543 SNORA75-201ENST00000384158 137 ntBASIC0.77□□□□□ -2.29
XRCC2O43543 MIR660-201ENST00000385235 97 ntBASIC0.77□□□□□ -2.29
XRCC2O43543 RNU6-1054P-201ENST00000411293 104 ntBASIC0.77□□□□□ -2.29
XRCC2O43543 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.77□□□□□ -2.29
XRCC2O43543 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.77□□□□□ -2.29
XRCC2O43543 AC002429.1-201ENST00000437672 148 ntBASIC0.77□□□□□ -2.29
XRCC2O43543 AC005840.1-201ENST00000498412 377 ntBASIC0.77□□□□□ -2.29
XRCC2O43543 RNA5SP168-201ENST00000516642 112 ntBASIC0.77□□□□□ -2.29
XRCC2O43543 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 151.8 ms