Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.76□□□□□ -1.97
PROM1O43490 Y_RNA.117-201ENST00000363294 101 ntBASIC2.76□□□□□ -1.97
PROM1O43490 Y_RNA.200-201ENST00000364018 102 ntBASIC2.76□□□□□ -1.97
PROM1O43490 SNORA9.2-201ENST00000365361 133 ntBASIC2.76□□□□□ -1.97
PROM1O43490 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.76□□□□□ -1.97
PROM1O43490 PIGPP3-201ENST00000425307 415 ntBASIC2.76□□□□□ -1.97
PROM1O43490 RAB28P5-201ENST00000427490 651 ntBASIC2.76□□□□□ -1.97
PROM1O43490 AC083906.5-201ENST00000503722 328 ntBASIC2.76□□□□□ -1.97
PROM1O43490 SCARNA17.1-201ENST00000516211 143 ntBASIC2.76□□□□□ -1.97
PROM1O43490 SCARNA17.2-201ENST00000516334 143 ntBASIC2.76□□□□□ -1.97
PROM1O43490 RNU6-182P-201ENST00000516970 105 ntBASIC2.76□□□□□ -1.97
PROM1O43490 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.76□□□□□ -1.97
PROM1O43490 AC055872.1-201ENST00000570978 278 ntBASIC2.76□□□□□ -1.97
PROM1O43490 MIR4643-201ENST00000577473 78 ntBASIC2.76□□□□□ -1.97
PROM1O43490 MIR3945-201ENST00000581853 98 ntBASIC2.76□□□□□ -1.97
PROM1O43490 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.76□□□□□ -1.97
PROM1O43490 AL356280.1-201ENST00000603614 379 ntBASIC2.76□□□□□ -1.97
PROM1O43490 SCARNA17.4-201ENST00000614296 143 ntBASIC2.76□□□□□ -1.97
PROM1O43490 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
PROM1O43490 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
PROM1O43490 AL359854.1-201ENST00000614203 1594 ntBASIC2.75□□□□□ -1.97
PROM1O43490 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.75□□□□□ -1.97
PROM1O43490 RNU1-62P-201ENST00000362599 164 ntBASIC2.75□□□□□ -1.97
PROM1O43490 Y_RNA.274-201ENST00000364714 101 ntBASIC2.75□□□□□ -1.97
PROM1O43490 Y_RNA.383-201ENST00000383855 97 ntBASIC2.75□□□□□ -1.97
PROM1O43490 SNORA18.2-201ENST00000383865 132 ntBASIC2.75□□□□□ -1.97
PROM1O43490 Y_RNA.415-201ENST00000384012 112 ntBASIC2.75□□□□□ -1.97
PROM1O43490 MIR181B1-201ENST00000385240 110 ntBASIC2.75□□□□□ -1.97
PROM1O43490 SNORA46.1-201ENST00000391069 153 ntBASIC2.75□□□□□ -1.97
PROM1O43490 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
PROM1O43490 MIR1298-201ENST00000408783 112 ntBASIC2.75□□□□□ -1.97
PROM1O43490 AC022018.1-201ENST00000430685 241 ntBASIC2.75□□□□□ -1.97
PROM1O43490 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.75□□□□□ -1.97
PROM1O43490 AC004386.2-201ENST00000441858 148 ntBASIC2.75□□□□□ -1.97
PROM1O43490 NDUFB4P10-201ENST00000452541 359 ntBASIC2.75□□□□□ -1.97
PROM1O43490 AC005042.3-201ENST00000453230 174 ntBASIC2.75□□□□□ -1.97
PROM1O43490 RPS3P1-201ENST00000456781 192 ntBASIC2.75□□□□□ -1.97
PROM1O43490 PRELID3BP1-201ENST00000457142 540 ntBASIC2.75□□□□□ -1.97
PROM1O43490 RPS27AP9-201ENST00000477681 438 ntBASIC2.75□□□□□ -1.97
PROM1O43490 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.75□□□□□ -1.97
PROM1O43490 RNU1-117P-201ENST00000517041 158 ntBASIC2.75□□□□□ -1.97
PROM1O43490 SNORA81.3-201ENST00000517283 198 ntBASIC2.75□□□□□ -1.97
PROM1O43490 AC079598.5-201ENST00000547460 117 ntBASIC2.75□□□□□ -1.97
PROM1O43490 AC026470.2-201ENST00000561492 181 ntBASIC2.75□□□□□ -1.97
PROM1O43490 MIR5006-201ENST00000583027 110 ntBASIC2.75□□□□□ -1.97
PROM1O43490 MIR4765-201ENST00000585007 77 ntBASIC2.75□□□□□ -1.97
PROM1O43490 AC004467.1-201ENST00000615678 330 ntBASIC2.75□□□□□ -1.97
PROM1O43490 AC005562.2-201ENST00000618264 111 ntBASIC2.75□□□□□ -1.97
PROM1O43490 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
PROM1O43490 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
PROM1O43490 AC069528.2-201ENST00000624849 1991 ntBASIC2.74□□□□□ -1.97
PROM1O43490 MIR410-201ENST00000362222 80 ntBASIC2.74□□□□□ -1.97
PROM1O43490 RNU1-35P-201ENST00000362782 153 ntBASIC2.74□□□□□ -1.97
PROM1O43490 RNU6-740P-201ENST00000364734 105 ntBASIC2.74□□□□□ -1.97
PROM1O43490 Y_RNA.418-201ENST00000384029 102 ntBASIC2.74□□□□□ -1.97
PROM1O43490 Y_RNA.446-201ENST00000384178 104 ntBASIC2.74□□□□□ -1.97
PROM1O43490 RNA5SP475-201ENST00000410568 110 ntBASIC2.74□□□□□ -1.97
PROM1O43490 AC097463.2-201ENST00000421074 142 ntBASIC2.74□□□□□ -1.97
PROM1O43490 MICF-203ENST00000432679 129 ntBASIC2.74□□□□□ -1.97
PROM1O43490 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.74□□□□□ -1.97
PROM1O43490 RNA5SP356-201ENST00000515972 94 ntBASIC2.74□□□□□ -1.97
PROM1O43490 Y_RNA.679-201ENST00000516416 91 ntBASIC2.74□□□□□ -1.97
PROM1O43490 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.74□□□□□ -1.97
PROM1O43490 MIR3162-201ENST00000581818 82 ntBASIC2.74□□□□□ -1.97
PROM1O43490 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.74□□□□□ -1.97
PROM1O43490 MIR6715A-201ENST00000615929 79 ntBASIC2.74□□□□□ -1.97
PROM1O43490 AC091932.3-201ENST00000624223 323 ntBASIC2.74□□□□□ -1.97
PROM1O43490 AC090517.3-201ENST00000625170 141 ntBASIC2.74□□□□□ -1.97
PROM1O43490 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
PROM1O43490 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
PROM1O43490 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PROM1O43490 AC092593.1-201ENST00000515413 1815 ntBASIC2.73□□□□□ -1.97
PROM1O43490 Y_RNA.29-201ENST00000362570 113 ntBASIC2.73□□□□□ -1.97
PROM1O43490 Y_RNA.83-201ENST00000363005 113 ntBASIC2.73□□□□□ -1.97
PROM1O43490 Y_RNA.199-201ENST00000364014 102 ntBASIC2.73□□□□□ -1.97
PROM1O43490 RNY1-201ENST00000364228 113 ntBASIC2.73□□□□□ -1.97
PROM1O43490 SNORA12-201ENST00000391162 147 ntBASIC2.73□□□□□ -1.97
PROM1O43490 SNORD58.1-201ENST00000391313 66 ntBASIC2.73□□□□□ -1.97
PROM1O43490 AL590004.2-201ENST00000404787 371 ntBASIC2.73□□□□□ -1.97
PROM1O43490 MIR548I3-201ENST00000408378 149 ntBASIC2.73□□□□□ -1.97
PROM1O43490 MIR548I1-201ENST00000408810 149 ntBASIC2.73□□□□□ -1.97
PROM1O43490 ELOCP21-201ENST00000412558 336 ntBASIC2.73□□□□□ -1.97
PROM1O43490 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.73□□□□□ -1.97
PROM1O43490 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.73□□□□□ -1.97
PROM1O43490 RPS29P26-201ENST00000477483 171 ntBASIC2.73□□□□□ -1.97
PROM1O43490 AC091959.1-201ENST00000495857 238 ntBASIC2.73□□□□□ -1.97
PROM1O43490 SCGB1D5P-201ENST00000515134 247 ntBASIC2.73□□□□□ -1.97
PROM1O43490 RNU6-155P-201ENST00000516347 100 ntBASIC2.73□□□□□ -1.97
PROM1O43490 RNU6-826P-201ENST00000516827 104 ntBASIC2.73□□□□□ -1.97
PROM1O43490 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.73□□□□□ -1.97
PROM1O43490 RPL21P9-201ENST00000556149 474 ntBASIC2.73□□□□□ -1.97
PROM1O43490 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.73□□□□□ -1.97
PROM1O43490 AL162424.1-201ENST00000602325 221 ntBASIC2.73□□□□□ -1.97
PROM1O43490 AC022441.3-201ENST00000605737 136 ntBASIC2.73□□□□□ -1.97
PROM1O43490 SNORD11B-201ENST00000607707 90 ntBASIC2.73□□□□□ -1.97
PROM1O43490 AC098479.1-201ENST00000609225 154 ntBASIC2.73□□□□□ -1.97
PROM1O43490 AC090115.4-201ENST00000609970 188 ntBASIC2.73□□□□□ -1.97
PROM1O43490 TCL6_2.1-201ENST00000615162 119 ntBASIC2.73□□□□□ -1.97
PROM1O43490 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.73□□□□□ -1.97
PROM1O43490 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms