Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AL021397.1-201ENST00000451806 248 ntBASIC4.28□□□□□ -1.72
HOXA2O43364 RPS29P21-201ENST00000496272 170 ntBASIC4.28□□□□□ -1.72
HOXA2O43364 RNU6-365P-201ENST00000517113 106 ntBASIC4.28□□□□□ -1.72
HOXA2O43364 YPEL5P3-201ENST00000547227 352 ntBASIC4.28□□□□□ -1.72
HOXA2O43364 JPX_2.1-201ENST00000614161 69 ntBASIC4.28□□□□□ -1.72
HOXA2O43364 MIR8058-201ENST00000615737 89 ntBASIC4.28□□□□□ -1.72
HOXA2O43364 AL591926.4-201ENST00000616895 298 ntBASIC4.28□□□□□ -1.72
HOXA2O43364 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXA2O43364 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HOXA2O43364 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.28□□□□□ -1.72
HOXA2O43364 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXA2O43364 AP003122.5-201ENST00000527668 3766 ntBASIC4.28□□□□□ -1.72
HOXA2O43364 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXA2O43364 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXA2O43364 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HOXA2O43364 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HOXA2O43364 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
HOXA2O43364 RNA5SP124-201ENST00000362739 110 ntBASIC4.27□□□□□ -1.73
HOXA2O43364 SNORA31.1-201ENST00000515993 133 ntBASIC4.27□□□□□ -1.73
HOXA2O43364 SNORA31.5-201ENST00000516190 133 ntBASIC4.27□□□□□ -1.73
HOXA2O43364 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXA2O43364 AC110741.2-201ENST00000605278 268 ntBASIC4.27□□□□□ -1.73
HOXA2O43364 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.27□□□□□ -1.73
HOXA2O43364 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.27□□□□□ -1.73
HOXA2O43364 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
HOXA2O43364 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXA2O43364 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HOXA2O43364 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA2O43364 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA2O43364 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXA2O43364 RNU1-22P-201ENST00000363334 158 ntBASIC4.26□□□□□ -1.73
HOXA2O43364 RNU1-105P-201ENST00000363470 161 ntBASIC4.26□□□□□ -1.73
HOXA2O43364 RNA5SP399-201ENST00000364003 117 ntBASIC4.26□□□□□ -1.73
HOXA2O43364 Y_RNA.281-201ENST00000364774 94 ntBASIC4.26□□□□□ -1.73
HOXA2O43364 RNU6-106P-201ENST00000384405 107 ntBASIC4.26□□□□□ -1.73
HOXA2O43364 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
HOXA2O43364 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXA2O43364 AC097462.1-201ENST00000514125 324 ntBASIC4.26□□□□□ -1.73
HOXA2O43364 RNU2-34P-201ENST00000516534 121 ntBASIC4.26□□□□□ -1.73
HOXA2O43364 AC026403.1-201ENST00000518938 295 ntBASIC4.26□□□□□ -1.73
HOXA2O43364 AC018630.3-201ENST00000542637 96 ntBASIC4.26□□□□□ -1.73
HOXA2O43364 AC011604.1-201ENST00000545978 196 ntBASIC4.26□□□□□ -1.73
HOXA2O43364 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
HOXA2O43364 RNU6-438P-201ENST00000365561 103 ntBASIC4.25□□□□□ -1.73
HOXA2O43364 RNU6-418P-201ENST00000384035 107 ntBASIC4.25□□□□□ -1.73
HOXA2O43364 RNU6-1274P-201ENST00000384557 107 ntBASIC4.25□□□□□ -1.73
HOXA2O43364 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXA2O43364 MIR1263-201ENST00000408324 86 ntBASIC4.25□□□□□ -1.73
HOXA2O43364 SNORA3C-201ENST00000408792 125 ntBASIC4.25□□□□□ -1.73
HOXA2O43364 AL139247.1-201ENST00000422768 325 ntBASIC4.25□□□□□ -1.73
HOXA2O43364 RNA5SP164-201ENST00000516533 110 ntBASIC4.25□□□□□ -1.73
HOXA2O43364 RNU7-172P-201ENST00000517125 64 ntBASIC4.25□□□□□ -1.73
HOXA2O43364 AC007751.1-201ENST00000529260 376 ntBASIC4.25□□□□□ -1.73
HOXA2O43364 AC087499.8-201ENST00000578406 226 ntBASIC4.25□□□□□ -1.73
HOXA2O43364 MIR4438-201ENST00000585271 93 ntBASIC4.25□□□□□ -1.73
HOXA2O43364 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA2O43364 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXA2O43364 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
HOXA2O43364 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXA2O43364 AL049781.1-201ENST00000623195 3585 ntBASIC4.24□□□□□ -1.73
HOXA2O43364 RNA5SP119-201ENST00000362715 117 ntBASIC4.24□□□□□ -1.73
HOXA2O43364 RNU6-944P-201ENST00000364023 107 ntBASIC4.24□□□□□ -1.73
HOXA2O43364 SNORD46.1-201ENST00000364139 104 ntBASIC4.24□□□□□ -1.73
HOXA2O43364 Y_RNA.486-201ENST00000384398 107 ntBASIC4.24□□□□□ -1.73
HOXA2O43364 AC016909.1-201ENST00000415916 166 ntBASIC4.24□□□□□ -1.73
HOXA2O43364 NDUFB1P1-201ENST00000435191 180 ntBASIC4.24□□□□□ -1.73
HOXA2O43364 RNU1-95P-201ENST00000516357 160 ntBASIC4.24□□□□□ -1.73
HOXA2O43364 RNU1-128P-201ENST00000516704 160 ntBASIC4.24□□□□□ -1.73
HOXA2O43364 RNU6-711P-201ENST00000517255 106 ntBASIC4.24□□□□□ -1.73
HOXA2O43364 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HOXA2O43364 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXA2O43364 AL136360.1-201ENST00000503377 1900 ntBASIC4.24□□□□□ -1.73
HOXA2O43364 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA2O43364 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
HOXA2O43364 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.23□□□□□ -1.73
HOXA2O43364 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA2O43364 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
HOXA2O43364 RNU6-486P-201ENST00000363116 107 ntBASIC4.23□□□□□ -1.73
HOXA2O43364 RNU6-1107P-201ENST00000364817 104 ntBASIC4.23□□□□□ -1.73
HOXA2O43364 RNA5SP125-201ENST00000364843 120 ntBASIC4.23□□□□□ -1.73
HOXA2O43364 SNORA70.4-201ENST00000365509 134 ntBASIC4.23□□□□□ -1.73
HOXA2O43364 Y_RNA.528-201ENST00000384575 108 ntBASIC4.23□□□□□ -1.73
HOXA2O43364 RNU6-554P-201ENST00000410466 106 ntBASIC4.23□□□□□ -1.73
HOXA2O43364 AL159169.1-201ENST00000421119 127 ntBASIC4.23□□□□□ -1.73
HOXA2O43364 RNU6-504P-201ENST00000516568 104 ntBASIC4.23□□□□□ -1.73
HOXA2O43364 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA2O43364 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA2O43364 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
HOXA2O43364 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA2O43364 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.22□□□□□ -1.73
HOXA2O43364 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
HOXA2O43364 SNORA63.1-201ENST00000362493 131 ntBASIC4.22□□□□□ -1.73
HOXA2O43364 Y_RNA.66-201ENST00000362862 102 ntBASIC4.22□□□□□ -1.73
HOXA2O43364 SNORA73.2-201ENST00000364946 201 ntBASIC4.22□□□□□ -1.73
HOXA2O43364 SNORA5A-201ENST00000384111 134 ntBASIC4.22□□□□□ -1.73
HOXA2O43364 U8.11-201ENST00000384699 133 ntBASIC4.22□□□□□ -1.73
HOXA2O43364 HDGFP1-201ENST00000405943 252 ntBASIC4.22□□□□□ -1.73
HOXA2O43364 U8.18-201ENST00000459285 133 ntBASIC4.22□□□□□ -1.73
HOXA2O43364 RN7SL585P-201ENST00000470538 280 ntBASIC4.22□□□□□ -1.73
HOXA2O43364 SNORD59.2-201ENST00000516873 68 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms