Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 RPL23AP75-201ENST00000491601 451 ntBASIC0.68□□□□□ -2.3
UPK2O00526 PSMC1P5-201ENST00000512850 177 ntBASIC0.68□□□□□ -2.3
UPK2O00526 FRG2DP-202ENST00000566967 323 ntBASIC0.68□□□□□ -2.3
UPK2O00526 AC087683.1-201ENST00000591187 441 ntBASIC0.68□□□□□ -2.3
UPK2O00526 FAM71BP1-201ENST00000604431 523 ntBASIC0.68□□□□□ -2.3
UPK2O00526 snoU13.31-201ENST00000607291 104 ntBASIC0.68□□□□□ -2.3
UPK2O00526 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.68□□□□□ -2.3
UPK2O00526 MIR6715A-201ENST00000615929 79 ntBASIC0.68□□□□□ -2.3
UPK2O00526 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.68□□□□□ -2.3
UPK2O00526 RNU1-36P-201ENST00000365130 165 ntBASIC0.67□□□□□ -2.3
UPK2O00526 RNU5A-6P-201ENST00000384136 116 ntBASIC0.67□□□□□ -2.3
UPK2O00526 SNORD41-201ENST00000386967 70 ntBASIC0.67□□□□□ -2.3
UPK2O00526 AL049545.1-201ENST00000401856 572 ntBASIC0.67□□□□□ -2.3
UPK2O00526 AL034345.1-201ENST00000407768 123 ntBASIC0.67□□□□□ -2.3
UPK2O00526 MIR320B2-201ENST00000408479 138 ntBASIC0.67□□□□□ -2.3
UPK2O00526 POLR2J4-204ENST00000418424 324 ntBASIC0.67□□□□□ -2.3
UPK2O00526 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.67□□□□□ -2.3
UPK2O00526 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.67□□□□□ -2.3
UPK2O00526 AC245047.7-201ENST00000440265 293 ntBASIC0.67□□□□□ -2.3
UPK2O00526 USP9YP29-201ENST00000445112 563 ntBASIC0.67□□□□□ -2.3
UPK2O00526 PDCD5P2-201ENST00000507570 312 ntBASIC0.67□□□□□ -2.3
UPK2O00526 RNU6-351P-201ENST00000516097 100 ntBASIC0.67□□□□□ -2.3
UPK2O00526 RNU6-344P-201ENST00000516635 111 ntBASIC0.67□□□□□ -2.3
UPK2O00526 MTND1P5-201ENST00000517906 940 ntBASIC0.67□□□□□ -2.3
UPK2O00526 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.67□□□□□ -2.3
UPK2O00526 CBX3P8-201ENST00000532412 525 ntBASIC0.67□□□□□ -2.3
UPK2O00526 MTATP6P24-201ENST00000576835 677 ntBASIC0.67□□□□□ -2.3
UPK2O00526 AL513534.2-201ENST00000603836 250 ntBASIC0.67□□□□□ -2.3
UPK2O00526 AC211469.2-201ENST00000605461 205 ntBASIC0.67□□□□□ -2.3
UPK2O00526 AC109347.2-201ENST00000610220 349 ntBASIC0.67□□□□□ -2.3
UPK2O00526 MIR6857-201ENST00000613267 93 ntBASIC0.67□□□□□ -2.3
UPK2O00526 AL513423.1-201ENST00000621695 132 ntBASIC0.67□□□□□ -2.3
UPK2O00526 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.67□□□□□ -2.3
UPK2O00526 OR4G1P-203ENST00000641984 1631 ntBASIC0.67□□□□□ -2.3
UPK2O00526 AP000568.1-201ENST00000282964 442 ntBASIC0.66□□□□□ -2.3
UPK2O00526 RNU6-392P-201ENST00000364926 101 ntBASIC0.66□□□□□ -2.3
UPK2O00526 RNU4-66P-201ENST00000365199 138 ntBASIC0.66□□□□□ -2.3
UPK2O00526 MIR660-201ENST00000385235 97 ntBASIC0.66□□□□□ -2.3
UPK2O00526 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
UPK2O00526 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.66□□□□□ -2.3
UPK2O00526 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.66□□□□□ -2.3
UPK2O00526 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.66□□□□□ -2.3
UPK2O00526 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.66□□□□□ -2.3
UPK2O00526 AL359672.1-201ENST00000442302 409 ntBASIC0.66□□□□□ -2.3
UPK2O00526 STAG3L5P-204ENST00000443759 179 ntBASIC0.66□□□□□ -2.3
UPK2O00526 BET1P1-201ENST00000482276 359 ntBASIC0.66□□□□□ -2.3
UPK2O00526 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.66□□□□□ -2.3
UPK2O00526 RNA5SP401-201ENST00000515920 127 ntBASIC0.66□□□□□ -2.3
UPK2O00526 SNORA19.2-201ENST00000516013 114 ntBASIC0.66□□□□□ -2.3
UPK2O00526 SNORD79.1-201ENST00000516069 84 ntBASIC0.66□□□□□ -2.3
UPK2O00526 RNA5SP458-201ENST00000516188 119 ntBASIC0.66□□□□□ -2.3
UPK2O00526 RNU6-197P-201ENST00000516680 100 ntBASIC0.66□□□□□ -2.3
UPK2O00526 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.66□□□□□ -2.3
UPK2O00526 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.66□□□□□ -2.3
UPK2O00526 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.66□□□□□ -2.3
UPK2O00526 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.66□□□□□ -2.3
UPK2O00526 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.66□□□□□ -2.3
UPK2O00526 AC104984.5-201ENST00000586878 94 ntBASIC0.66□□□□□ -2.3
UPK2O00526 AC013244.2-201ENST00000603396 103 ntBASIC0.66□□□□□ -2.3
UPK2O00526 SNORD11B-201ENST00000607707 90 ntBASIC0.66□□□□□ -2.3
UPK2O00526 AC007684.1-201ENST00000609671 477 ntBASIC0.66□□□□□ -2.3
UPK2O00526 GHRLOS.1-201ENST00000610995 70 ntBASIC0.66□□□□□ -2.3
UPK2O00526 MIR8076-201ENST00000611401 83 ntBASIC0.66□□□□□ -2.3
UPK2O00526 AC073349.3-201ENST00000617616 186 ntBASIC0.66□□□□□ -2.3
UPK2O00526 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.66□□□□□ -2.3
UPK2O00526 RNU6-727P-201ENST00000363592 107 ntBASIC0.65□□□□□ -2.31
UPK2O00526 RNU4-20P-201ENST00000365601 151 ntBASIC0.65□□□□□ -2.31
UPK2O00526 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.65□□□□□ -2.31
UPK2O00526 RNU6-38P-201ENST00000384085 107 ntBASIC0.65□□□□□ -2.31
UPK2O00526 RNU6-784P-201ENST00000384330 106 ntBASIC0.65□□□□□ -2.31
UPK2O00526 MIR605-201ENST00000385078 83 ntBASIC0.65□□□□□ -2.31
UPK2O00526 MIR100-201ENST00000385259 80 ntBASIC0.65□□□□□ -2.31
UPK2O00526 AF228730.1-201ENST00000397972 663 ntBASIC0.65□□□□□ -2.31
UPK2O00526 RNU6-1054P-201ENST00000411293 104 ntBASIC0.65□□□□□ -2.31
UPK2O00526 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.65□□□□□ -2.31
UPK2O00526 AC006461.1-201ENST00000412637 326 ntBASIC0.65□□□□□ -2.31
UPK2O00526 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.65□□□□□ -2.31
UPK2O00526 MTCO2P16-201ENST00000436962 677 ntBASIC0.65□□□□□ -2.31
UPK2O00526 RPS4XP11-201ENST00000446897 772 ntBASIC0.65□□□□□ -2.31
UPK2O00526 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.65□□□□□ -2.31
UPK2O00526 RNU6-1332P-201ENST00000516666 104 ntBASIC0.65□□□□□ -2.31
UPK2O00526 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.65□□□□□ -2.31
UPK2O00526 AL590705.4-201ENST00000532209 134 ntBASIC0.65□□□□□ -2.31
UPK2O00526 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.65□□□□□ -2.31
UPK2O00526 AK6P2-201ENST00000549020 471 ntBASIC0.65□□□□□ -2.31
UPK2O00526 MIR4698-201ENST00000577795 80 ntBASIC0.65□□□□□ -2.31
UPK2O00526 CPDP1-201ENST00000579660 283 ntBASIC0.65□□□□□ -2.31
UPK2O00526 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.65□□□□□ -2.31
UPK2O00526 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.65□□□□□ -2.31
UPK2O00526 SNORD114-24-201ENST00000365029 72 ntBASIC0.64□□□□□ -2.31
UPK2O00526 RNU6-1080P-201ENST00000383982 107 ntBASIC0.64□□□□□ -2.31
UPK2O00526 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.64□□□□□ -2.31
UPK2O00526 Z82188.1-201ENST00000436709 154 ntBASIC0.64□□□□□ -2.31
UPK2O00526 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.64□□□□□ -2.31
UPK2O00526 TPT1P7-201ENST00000458300 517 ntBASIC0.64□□□□□ -2.31
UPK2O00526 SNORA40.12-201ENST00000516329 111 ntBASIC0.64□□□□□ -2.31
UPK2O00526 AC090142.3-201ENST00000519012 385 ntBASIC0.64□□□□□ -2.31
UPK2O00526 AC027419.1-201ENST00000522976 328 ntBASIC0.64□□□□□ -2.31
UPK2O00526 AL121579.1-201ENST00000555129 305 ntBASIC0.64□□□□□ -2.31
UPK2O00526 AC004584.2-201ENST00000570407 410 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms