Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 MIR1253-201ENST00000408273 105 ntBASIC4.26□□□□□ -1.73
RCCD1A6NED2 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC4.26□□□□□ -1.73
RCCD1A6NED2 SNRPGP10-201ENST00000432323 225 ntBASIC4.26□□□□□ -1.73
RCCD1A6NED2 HMGN2P18-201ENST00000450680 270 ntBASIC4.26□□□□□ -1.73
RCCD1A6NED2 RPL29P14-201ENST00000495837 428 ntBASIC4.26□□□□□ -1.73
RCCD1A6NED2 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.26□□□□□ -1.73
RCCD1A6NED2 Y_RNA.666-201ENST00000516187 112 ntBASIC4.26□□□□□ -1.73
RCCD1A6NED2 RN7SKP282-201ENST00000516824 299 ntBASIC4.26□□□□□ -1.73
RCCD1A6NED2 RNU6-158P-201ENST00000517104 100 ntBASIC4.26□□□□□ -1.73
RCCD1A6NED2 snoMBII-202.2-201ENST00000517263 86 ntBASIC4.26□□□□□ -1.73
RCCD1A6NED2 AC025627.2-201ENST00000576220 160 ntBASIC4.26□□□□□ -1.73
RCCD1A6NED2 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RCCD1A6NED2 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RCCD1A6NED2 MFSD8-236ENST00000641509 4050 ntBASIC4.26□□□□□ -1.73
RCCD1A6NED2 AC027290.2-201ENST00000623210 18662 ntBASIC4.26□□□□□ -1.73
RCCD1A6NED2 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.26□□□□□ -1.73
RCCD1A6NED2 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
RCCD1A6NED2 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RCCD1A6NED2 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RCCD1A6NED2 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RCCD1A6NED2 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.25□□□□□ -1.73
RCCD1A6NED2 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RCCD1A6NED2 RNU6-1083P-201ENST00000384022 107 ntBASIC4.25□□□□□ -1.73
RCCD1A6NED2 RNU11-5P-201ENST00000391216 129 ntBASIC4.25□□□□□ -1.73
RCCD1A6NED2 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.25□□□□□ -1.73
RCCD1A6NED2 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
RCCD1A6NED2 SNRPGP13-201ENST00000442212 177 ntBASIC4.25□□□□□ -1.73
RCCD1A6NED2 RN7SL93P-201ENST00000463035 293 ntBASIC4.25□□□□□ -1.73
RCCD1A6NED2 RN7SL385P-201ENST00000468873 276 ntBASIC4.25□□□□□ -1.73
RCCD1A6NED2 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.25□□□□□ -1.73
RCCD1A6NED2 RNU6-240P-201ENST00000516098 97 ntBASIC4.25□□□□□ -1.73
RCCD1A6NED2 RNU6-109P-201ENST00000516364 107 ntBASIC4.25□□□□□ -1.73
RCCD1A6NED2 RNU6-184P-201ENST00000516514 107 ntBASIC4.25□□□□□ -1.73
RCCD1A6NED2 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC4.25□□□□□ -1.73
RCCD1A6NED2 MIR4697-201ENST00000582977 78 ntBASIC4.25□□□□□ -1.73
RCCD1A6NED2 AC008507.4-201ENST00000585464 127 ntBASIC4.25□□□□□ -1.73
RCCD1A6NED2 LINC00901.1-201ENST00000617252 152 ntBASIC4.25□□□□□ -1.73
RCCD1A6NED2 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
RCCD1A6NED2 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RCCD1A6NED2 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RCCD1A6NED2 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.25□□□□□ -1.73
RCCD1A6NED2 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.24□□□□□ -1.73
RCCD1A6NED2 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.24□□□□□ -1.73
RCCD1A6NED2 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
RCCD1A6NED2 Y_RNA.78-201ENST00000362970 110 ntBASIC4.24□□□□□ -1.73
RCCD1A6NED2 AC083863.1-201ENST00000438811 231 ntBASIC4.24□□□□□ -1.73
RCCD1A6NED2 AC025750.2-201ENST00000442609 450 ntBASIC4.24□□□□□ -1.73
RCCD1A6NED2 AL500522.2-201ENST00000448562 343 ntBASIC4.24□□□□□ -1.73
RCCD1A6NED2 RN7SL271P-201ENST00000487601 295 ntBASIC4.24□□□□□ -1.73
RCCD1A6NED2 VWA8P1-201ENST00000510889 176 ntBASIC4.24□□□□□ -1.73
RCCD1A6NED2 MRPS36P2-201ENST00000512569 299 ntBASIC4.24□□□□□ -1.73
RCCD1A6NED2 MIR2114-201ENST00000516645 80 ntBASIC4.24□□□□□ -1.73
RCCD1A6NED2 RNU6-1231P-201ENST00000517185 103 ntBASIC4.24□□□□□ -1.73
RCCD1A6NED2 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC4.24□□□□□ -1.73
RCCD1A6NED2 AC068339.1-201ENST00000526965 141 ntBASIC4.24□□□□□ -1.73
RCCD1A6NED2 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.24□□□□□ -1.73
RCCD1A6NED2 MIR5197-201ENST00000583721 112 ntBASIC4.24□□□□□ -1.73
RCCD1A6NED2 MIR6758-201ENST00000620653 63 ntBASIC4.24□□□□□ -1.73
RCCD1A6NED2 CR392039.5-201ENST00000623201 510 ntBASIC4.24□□□□□ -1.73
RCCD1A6NED2 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
RCCD1A6NED2 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
RCCD1A6NED2 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.24□□□□□ -1.73
RCCD1A6NED2 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RCCD1A6NED2 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
RCCD1A6NED2 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.23□□□□□ -1.73
RCCD1A6NED2 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
RCCD1A6NED2 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RCCD1A6NED2 RNU6-414P-201ENST00000363705 104 ntBASIC4.23□□□□□ -1.73
RCCD1A6NED2 RNA5SP399-201ENST00000364003 117 ntBASIC4.23□□□□□ -1.73
RCCD1A6NED2 RNU6-820P-201ENST00000384273 107 ntBASIC4.23□□□□□ -1.73
RCCD1A6NED2 SNORA4.4-201ENST00000515921 135 ntBASIC4.23□□□□□ -1.73
RCCD1A6NED2 RN7SKP12-201ENST00000516275 143 ntBASIC4.23□□□□□ -1.73
RCCD1A6NED2 RNA5SP490-201ENST00000517141 136 ntBASIC4.23□□□□□ -1.73
RCCD1A6NED2 AC068657.1-201ENST00000520807 306 ntBASIC4.23□□□□□ -1.73
RCCD1A6NED2 AC087685.1-201ENST00000587507 141 ntBASIC4.23□□□□□ -1.73
RCCD1A6NED2 AC073413.2-201ENST00000604332 360 ntBASIC4.23□□□□□ -1.73
RCCD1A6NED2 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC4.23□□□□□ -1.73
RCCD1A6NED2 MIR1245B-201ENST00000636115 69 ntBASIC4.23□□□□□ -1.73
RCCD1A6NED2 LINC02471-203ENST00000641941 4752 ntBASIC4.23□□□□□ -1.73
RCCD1A6NED2 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.23□□□□□ -1.73
RCCD1A6NED2 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
RCCD1A6NED2 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RCCD1A6NED2 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RCCD1A6NED2 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.22□□□□□ -1.73
RCCD1A6NED2 Y_RNA.253-201ENST00000364562 112 ntBASIC4.22□□□□□ -1.73
RCCD1A6NED2 RNA5SP366-201ENST00000365454 123 ntBASIC4.22□□□□□ -1.73
RCCD1A6NED2 RNY1P7-201ENST00000384743 110 ntBASIC4.22□□□□□ -1.73
RCCD1A6NED2 MIR548A2-201ENST00000384956 97 ntBASIC4.22□□□□□ -1.73
RCCD1A6NED2 RN7SKP156-201ENST00000410308 342 ntBASIC4.22□□□□□ -1.73
RCCD1A6NED2 MIR6868-201ENST00000611215 58 ntBASIC4.22□□□□□ -1.73
RCCD1A6NED2 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RCCD1A6NED2 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
RCCD1A6NED2 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
RCCD1A6NED2 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
RCCD1A6NED2 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
RCCD1A6NED2 MIR1251-201ENST00000408552 70 ntBASIC4.21□□□□□ -1.74
RCCD1A6NED2 MTATP8P2-201ENST00000435212 202 ntBASIC4.21□□□□□ -1.74
RCCD1A6NED2 SNORA71B-202ENST00000439232 272 ntBASIC4.21□□□□□ -1.74
RCCD1A6NED2 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.21□□□□□ -1.74
RCCD1A6NED2 AC233266.1-201ENST00000454518 96 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms