Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 AC022616.8-201ENST00000533569 253 ntBASIC2.71□□□□□ -1.98
TRIM43BA6NCK2 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.71□□□□□ -1.98
TRIM43BA6NCK2 AC008737.2-201ENST00000599446 118 ntBASIC2.71□□□□□ -1.98
TRIM43BA6NCK2 Z82195.2-201ENST00000612348 18351 ntBASIC2.71□□□□□ -1.98
TRIM43BA6NCK2 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.7□□□□□ -1.98
TRIM43BA6NCK2 RNU1-23P-201ENST00000363361 144 ntBASIC2.7□□□□□ -1.98
TRIM43BA6NCK2 RNU6-234P-201ENST00000365229 104 ntBASIC2.7□□□□□ -1.98
TRIM43BA6NCK2 SNORA63.7-201ENST00000365579 123 ntBASIC2.7□□□□□ -1.98
TRIM43BA6NCK2 RNU6-318P-201ENST00000384283 103 ntBASIC2.7□□□□□ -1.98
TRIM43BA6NCK2 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
TRIM43BA6NCK2 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.7□□□□□ -1.98
TRIM43BA6NCK2 SUMO1P4-201ENST00000429430 302 ntBASIC2.7□□□□□ -1.98
TRIM43BA6NCK2 RPS12P2-201ENST00000439728 269 ntBASIC2.7□□□□□ -1.98
TRIM43BA6NCK2 RNA5SP458-201ENST00000516188 119 ntBASIC2.7□□□□□ -1.98
TRIM43BA6NCK2 Y_RNA.715-201ENST00000517082 110 ntBASIC2.7□□□□□ -1.98
TRIM43BA6NCK2 CYCSP23-201ENST00000519781 313 ntBASIC2.7□□□□□ -1.98
TRIM43BA6NCK2 AC021269.2-201ENST00000532318 330 ntBASIC2.7□□□□□ -1.98
TRIM43BA6NCK2 AC023824.2-201ENST00000566185 400 ntBASIC2.7□□□□□ -1.98
TRIM43BA6NCK2 AC113195.1-201ENST00000579952 141 ntBASIC2.7□□□□□ -1.98
TRIM43BA6NCK2 U6.92-201ENST00000636464 89 ntBASIC2.7□□□□□ -1.98
TRIM43BA6NCK2 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
TRIM43BA6NCK2 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.7□□□□□ -1.98
TRIM43BA6NCK2 MTND5P35-201ENST00000557537 1720 ntBASIC2.7□□□□□ -1.98
TRIM43BA6NCK2 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
TRIM43BA6NCK2 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
TRIM43BA6NCK2 Y_RNA.152-201ENST00000363578 100 ntBASIC2.69□□□□□ -1.98
TRIM43BA6NCK2 Y_RNA.459-201ENST00000384251 102 ntBASIC2.69□□□□□ -1.98
TRIM43BA6NCK2 Y_RNA.471-201ENST00000384312 102 ntBASIC2.69□□□□□ -1.98
TRIM43BA6NCK2 RNU6-1026P-201ENST00000384465 108 ntBASIC2.69□□□□□ -1.98
TRIM43BA6NCK2 Y_RNA.551-201ENST00000384661 102 ntBASIC2.69□□□□□ -1.98
TRIM43BA6NCK2 MIR329-1-201ENST00000385028 80 ntBASIC2.69□□□□□ -1.98
TRIM43BA6NCK2 MIR1252-201ENST00000408861 65 ntBASIC2.69□□□□□ -1.98
TRIM43BA6NCK2 SNORD12B-201ENST00000410433 91 ntBASIC2.69□□□□□ -1.98
TRIM43BA6NCK2 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.69□□□□□ -1.98
TRIM43BA6NCK2 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.69□□□□□ -1.98
TRIM43BA6NCK2 AC091179.3-201ENST00000474761 144 ntBASIC2.69□□□□□ -1.98
TRIM43BA6NCK2 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.69□□□□□ -1.98
TRIM43BA6NCK2 RNU6-344P-201ENST00000516635 111 ntBASIC2.69□□□□□ -1.98
TRIM43BA6NCK2 RNU6-1098P-201ENST00000516772 96 ntBASIC2.69□□□□□ -1.98
TRIM43BA6NCK2 AC034114.1-201ENST00000520293 285 ntBASIC2.69□□□□□ -1.98
TRIM43BA6NCK2 AL121655.1-201ENST00000605811 308 ntBASIC2.69□□□□□ -1.98
TRIM43BA6NCK2 AC103810.6-201ENST00000606708 136 ntBASIC2.69□□□□□ -1.98
TRIM43BA6NCK2 SNORD11B-201ENST00000607707 90 ntBASIC2.69□□□□□ -1.98
TRIM43BA6NCK2 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.69□□□□□ -1.98
TRIM43BA6NCK2 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.68□□□□□ -1.98
TRIM43BA6NCK2 RNU6-727P-201ENST00000363592 107 ntBASIC2.68□□□□□ -1.98
TRIM43BA6NCK2 RNU6-926P-201ENST00000384075 107 ntBASIC2.68□□□□□ -1.98
TRIM43BA6NCK2 snosnR66.1-201ENST00000391095 99 ntBASIC2.68□□□□□ -1.98
TRIM43BA6NCK2 AL033519.2-201ENST00000403958 392 ntBASIC2.68□□□□□ -1.98
TRIM43BA6NCK2 FCF1P4-201ENST00000448326 183 ntBASIC2.68□□□□□ -1.98
TRIM43BA6NCK2 AC007395.1-201ENST00000451333 677 ntBASIC2.68□□□□□ -1.98
TRIM43BA6NCK2 MTND5P22-201ENST00000458380 195 ntBASIC2.68□□□□□ -1.98
TRIM43BA6NCK2 AL355297.3-201ENST00000604082 446 ntBASIC2.68□□□□□ -1.98
TRIM43BA6NCK2 AC005034.5-201ENST00000604219 466 ntBASIC2.68□□□□□ -1.98
TRIM43BA6NCK2 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.68□□□□□ -1.98
TRIM43BA6NCK2 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
TRIM43BA6NCK2 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.67□□□□□ -1.98
TRIM43BA6NCK2 AC080100.1-201ENST00000624239 5356 ntBASIC2.67□□□□□ -1.98
TRIM43BA6NCK2 RNU1-91P-201ENST00000364746 163 ntBASIC2.67□□□□□ -1.98
TRIM43BA6NCK2 DEFA7P-201ENST00000382676 285 ntBASIC2.67□□□□□ -1.98
TRIM43BA6NCK2 RNU6-1145P-201ENST00000384246 107 ntBASIC2.67□□□□□ -1.98
TRIM43BA6NCK2 CR769767.1-201ENST00000436337 346 ntBASIC2.67□□□□□ -1.98
TRIM43BA6NCK2 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.67□□□□□ -1.98
TRIM43BA6NCK2 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.67□□□□□ -1.98
TRIM43BA6NCK2 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.67□□□□□ -1.98
TRIM43BA6NCK2 UQCRBP2-201ENST00000447827 297 ntBASIC2.67□□□□□ -1.98
TRIM43BA6NCK2 RNU7-14P-201ENST00000459331 62 ntBASIC2.67□□□□□ -1.98
TRIM43BA6NCK2 U8.20-201ENST00000459445 131 ntBASIC2.67□□□□□ -1.98
TRIM43BA6NCK2 AC010469.2-201ENST00000496412 480 ntBASIC2.67□□□□□ -1.98
TRIM43BA6NCK2 Y_RNA.713-201ENST00000517013 96 ntBASIC2.67□□□□□ -1.98
TRIM43BA6NCK2 RNU1-117P-201ENST00000517041 158 ntBASIC2.67□□□□□ -1.98
TRIM43BA6NCK2 MIR4659A-201ENST00000580269 81 ntBASIC2.67□□□□□ -1.98
TRIM43BA6NCK2 AC136443.5-201ENST00000603741 370 ntBASIC2.67□□□□□ -1.98
TRIM43BA6NCK2 MZT1P2-201ENST00000604387 248 ntBASIC2.67□□□□□ -1.98
TRIM43BA6NCK2 Y_RNA.772-201ENST00000606692 102 ntBASIC2.67□□□□□ -1.98
TRIM43BA6NCK2 U4atac.1-201ENST00000618345 95 ntBASIC2.67□□□□□ -1.98
TRIM43BA6NCK2 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
TRIM43BA6NCK2 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
TRIM43BA6NCK2 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TRIM43BA6NCK2 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TRIM43BA6NCK2 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
TRIM43BA6NCK2 RNU6-743P-201ENST00000364151 106 ntBASIC2.66□□□□□ -1.98
TRIM43BA6NCK2 AC004866.1-201ENST00000411748 78 ntBASIC2.66□□□□□ -1.98
TRIM43BA6NCK2 AC009238.1-201ENST00000442165 424 ntBASIC2.66□□□□□ -1.98
TRIM43BA6NCK2 AC009237.6-201ENST00000446969 424 ntBASIC2.66□□□□□ -1.98
TRIM43BA6NCK2 RNU7-26P-201ENST00000458980 63 ntBASIC2.66□□□□□ -1.98
TRIM43BA6NCK2 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.66□□□□□ -1.98
TRIM43BA6NCK2 SNORA31.11-201ENST00000516528 139 ntBASIC2.66□□□□□ -1.98
TRIM43BA6NCK2 RNU6-1012P-201ENST00000516606 109 ntBASIC2.66□□□□□ -1.98
TRIM43BA6NCK2 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.66□□□□□ -1.98
TRIM43BA6NCK2 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.66□□□□□ -1.98
TRIM43BA6NCK2 AC240442.1-201ENST00000616055 283 ntBASIC2.66□□□□□ -1.98
TRIM43BA6NCK2 AC131280.1-202ENST00000624067 4211 ntBASIC2.66□□□□□ -1.98
TRIM43BA6NCK2 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.66□□□□□ -1.98
TRIM43BA6NCK2 MAPK10-266ENST00000641066 6555 ntBASIC2.65□□□□□ -1.98
TRIM43BA6NCK2 Y_RNA.4-201ENST00000362333 112 ntBASIC2.65□□□□□ -1.99
TRIM43BA6NCK2 AL357139.1-201ENST00000407792 426 ntBASIC2.65□□□□□ -1.99
TRIM43BA6NCK2 RNA5SP181-201ENST00000410246 98 ntBASIC2.65□□□□□ -1.99
TRIM43BA6NCK2 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.65□□□□□ -1.99
TRIM43BA6NCK2 RPEP5-201ENST00000441137 268 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms