Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 HMGN2P18-201ENST00000450680 270 ntBASIC2.33□□□□□ -2.04
TCRBV7S3A2A0A539 AC016925.1-201ENST00000458303 298 ntBASIC2.33□□□□□ -2.04
TCRBV7S3A2A0A539 MRPS35P2-201ENST00000508242 191 ntBASIC2.33□□□□□ -2.04
TCRBV7S3A2A0A539 AC107222.1-201ENST00000510899 637 ntBASIC2.33□□□□□ -2.04
TCRBV7S3A2A0A539 SNORA31.11-201ENST00000516528 139 ntBASIC2.33□□□□□ -2.04
TCRBV7S3A2A0A539 RPPH1-2P-201ENST00000516688 293 ntBASIC2.33□□□□□ -2.04
TCRBV7S3A2A0A539 RNU6-897P-201ENST00000517135 105 ntBASIC2.33□□□□□ -2.04
TCRBV7S3A2A0A539 AC018448.1-201ENST00000552843 316 ntBASIC2.33□□□□□ -2.04
TCRBV7S3A2A0A539 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.33□□□□□ -2.04
TCRBV7S3A2A0A539 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.33□□□□□ -2.04
TCRBV7S3A2A0A539 MIR6766-201ENST00000622641 72 ntBASIC2.33□□□□□ -2.04
TCRBV7S3A2A0A539 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
TCRBV7S3A2A0A539 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
TCRBV7S3A2A0A539 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.32□□□□□ -2.04
TCRBV7S3A2A0A539 RNU6-727P-201ENST00000363592 107 ntBASIC2.32□□□□□ -2.04
TCRBV7S3A2A0A539 SNORA5B-201ENST00000363786 132 ntBASIC2.32□□□□□ -2.04
TCRBV7S3A2A0A539 RNU6-926P-201ENST00000384075 107 ntBASIC2.32□□□□□ -2.04
TCRBV7S3A2A0A539 RNU6-1109P-201ENST00000391187 107 ntBASIC2.32□□□□□ -2.04
TCRBV7S3A2A0A539 AL079342.1-201ENST00000401460 267 ntBASIC2.32□□□□□ -2.04
TCRBV7S3A2A0A539 AL357139.1-201ENST00000407792 426 ntBASIC2.32□□□□□ -2.04
TCRBV7S3A2A0A539 MIR1283-1-201ENST00000408494 87 ntBASIC2.32□□□□□ -2.04
TCRBV7S3A2A0A539 Z92545.1-201ENST00000411782 234 ntBASIC2.32□□□□□ -2.04
TCRBV7S3A2A0A539 ELOCP20-201ENST00000422460 345 ntBASIC2.32□□□□□ -2.04
TCRBV7S3A2A0A539 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.32□□□□□ -2.04
TCRBV7S3A2A0A539 AC009238.1-201ENST00000442165 424 ntBASIC2.32□□□□□ -2.04
TCRBV7S3A2A0A539 AC009237.6-201ENST00000446969 424 ntBASIC2.32□□□□□ -2.04
TCRBV7S3A2A0A539 UQCRBP2-201ENST00000447827 297 ntBASIC2.32□□□□□ -2.04
TCRBV7S3A2A0A539 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.32□□□□□ -2.04
TCRBV7S3A2A0A539 RNU6-1143P-201ENST00000516125 104 ntBASIC2.32□□□□□ -2.04
TCRBV7S3A2A0A539 SNORA31.15-201ENST00000516771 132 ntBASIC2.32□□□□□ -2.04
TCRBV7S3A2A0A539 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.32□□□□□ -2.04
TCRBV7S3A2A0A539 MIR5007-201ENST00000583098 95 ntBASIC2.32□□□□□ -2.04
TCRBV7S3A2A0A539 AC011476.5-201ENST00000615594 130 ntBASIC2.32□□□□□ -2.04
TCRBV7S3A2A0A539 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
TCRBV7S3A2A0A539 RNU6-545P-201ENST00000362681 104 ntBASIC2.31□□□□□ -2.04
TCRBV7S3A2A0A539 U3.8-201ENST00000363675 217 ntBASIC2.31□□□□□ -2.04
TCRBV7S3A2A0A539 Y_RNA.210-201ENST00000364161 110 ntBASIC2.31□□□□□ -2.04
TCRBV7S3A2A0A539 Y_RNA.332-201ENST00000365271 113 ntBASIC2.31□□□□□ -2.04
TCRBV7S3A2A0A539 SNORD63-201ENST00000384262 68 ntBASIC2.31□□□□□ -2.04
TCRBV7S3A2A0A539 Y_RNA.462-201ENST00000384268 102 ntBASIC2.31□□□□□ -2.04
TCRBV7S3A2A0A539 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.31□□□□□ -2.04
TCRBV7S3A2A0A539 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.31□□□□□ -2.04
TCRBV7S3A2A0A539 MTATP8P1-201ENST00000467115 207 ntBASIC2.31□□□□□ -2.04
TCRBV7S3A2A0A539 HMGN2P9-201ENST00000476875 229 ntBASIC2.31□□□□□ -2.04
TCRBV7S3A2A0A539 AC104435.1-201ENST00000483483 166 ntBASIC2.31□□□□□ -2.04
TCRBV7S3A2A0A539 RN7SL636P-201ENST00000497504 294 ntBASIC2.31□□□□□ -2.04
TCRBV7S3A2A0A539 AC093259.1-201ENST00000509755 300 ntBASIC2.31□□□□□ -2.04
TCRBV7S3A2A0A539 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.31□□□□□ -2.04
TCRBV7S3A2A0A539 RNU6-667P-201ENST00000517186 102 ntBASIC2.31□□□□□ -2.04
TCRBV7S3A2A0A539 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.31□□□□□ -2.04
TCRBV7S3A2A0A539 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.31□□□□□ -2.04
TCRBV7S3A2A0A539 MIR4423-201ENST00000580922 80 ntBASIC2.31□□□□□ -2.04
TCRBV7S3A2A0A539 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
TCRBV7S3A2A0A539 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
TCRBV7S3A2A0A539 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.31□□□□□ -2.04
TCRBV7S3A2A0A539 AC009487.4-201ENST00000624969 3585 ntBASIC2.3□□□□□ -2.04
TCRBV7S3A2A0A539 RNA5SP289-201ENST00000362332 137 ntBASIC2.3□□□□□ -2.04
TCRBV7S3A2A0A539 RNU6-961P-201ENST00000363893 105 ntBASIC2.3□□□□□ -2.04
TCRBV7S3A2A0A539 RNU6-770P-201ENST00000363929 105 ntBASIC2.3□□□□□ -2.04
TCRBV7S3A2A0A539 Y_RNA.230-201ENST00000364348 109 ntBASIC2.3□□□□□ -2.04
TCRBV7S3A2A0A539 SNORD87-201ENST00000364849 89 ntBASIC2.3□□□□□ -2.04
TCRBV7S3A2A0A539 RNU6-1264P-201ENST00000383891 107 ntBASIC2.3□□□□□ -2.04
TCRBV7S3A2A0A539 Y_RNA.498-201ENST00000384460 102 ntBASIC2.3□□□□□ -2.04
TCRBV7S3A2A0A539 RNU6-1026P-201ENST00000384465 108 ntBASIC2.3□□□□□ -2.04
TCRBV7S3A2A0A539 RPL23AP83-201ENST00000434984 473 ntBASIC2.3□□□□□ -2.04
TCRBV7S3A2A0A539 MTND3P2-201ENST00000438452 342 ntBASIC2.3□□□□□ -2.04
TCRBV7S3A2A0A539 RNU7-26P-201ENST00000458980 63 ntBASIC2.3□□□□□ -2.04
TCRBV7S3A2A0A539 HMGN1P10-201ENST00000474557 553 ntBASIC2.3□□□□□ -2.04
TCRBV7S3A2A0A539 AC025465.3-201ENST00000510570 311 ntBASIC2.3□□□□□ -2.04
TCRBV7S3A2A0A539 MTCO2P24-201ENST00000515611 426 ntBASIC2.3□□□□□ -2.04
TCRBV7S3A2A0A539 RNU6-408P-201ENST00000515910 100 ntBASIC2.3□□□□□ -2.04
TCRBV7S3A2A0A539 RNA5SP490-201ENST00000517141 136 ntBASIC2.3□□□□□ -2.04
TCRBV7S3A2A0A539 PRELID2P1-201ENST00000552837 301 ntBASIC2.3□□□□□ -2.04
TCRBV7S3A2A0A539 AC006023.1-201ENST00000603944 259 ntBASIC2.3□□□□□ -2.04
TCRBV7S3A2A0A539 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.3□□□□□ -2.04
TCRBV7S3A2A0A539 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.3□□□□□ -2.04
TCRBV7S3A2A0A539 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
TCRBV7S3A2A0A539 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
TCRBV7S3A2A0A539 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
TCRBV7S3A2A0A539 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
TCRBV7S3A2A0A539 RNU6-1309P-201ENST00000363305 108 ntBASIC2.29□□□□□ -2.04
TCRBV7S3A2A0A539 RNU6-626P-201ENST00000363354 107 ntBASIC2.29□□□□□ -2.04
TCRBV7S3A2A0A539 RNU6-1305P-201ENST00000364353 104 ntBASIC2.29□□□□□ -2.04
TCRBV7S3A2A0A539 SNORA80E-201ENST00000384744 137 ntBASIC2.29□□□□□ -2.04
TCRBV7S3A2A0A539 SRIP3-201ENST00000413200 219 ntBASIC2.29□□□□□ -2.04
TCRBV7S3A2A0A539 RAB28P5-201ENST00000427490 651 ntBASIC2.29□□□□□ -2.04
TCRBV7S3A2A0A539 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.29□□□□□ -2.04
TCRBV7S3A2A0A539 AL731563.1-201ENST00000442202 214 ntBASIC2.29□□□□□ -2.04
TCRBV7S3A2A0A539 AL137159.1-201ENST00000452808 512 ntBASIC2.29□□□□□ -2.04
TCRBV7S3A2A0A539 RNU6-625P-201ENST00000459412 107 ntBASIC2.29□□□□□ -2.04
TCRBV7S3A2A0A539 RNU6-397P-201ENST00000516226 104 ntBASIC2.29□□□□□ -2.04
TCRBV7S3A2A0A539 RNU1-117P-201ENST00000517041 158 ntBASIC2.29□□□□□ -2.04
TCRBV7S3A2A0A539 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.29□□□□□ -2.04
TCRBV7S3A2A0A539 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.29□□□□□ -2.04
TCRBV7S3A2A0A539 CYCSP26-201ENST00000534107 320 ntBASIC2.29□□□□□ -2.04
TCRBV7S3A2A0A539 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.29□□□□□ -2.04
TCRBV7S3A2A0A539 MIR4753-201ENST00000585119 83 ntBASIC2.29□□□□□ -2.04
TCRBV7S3A2A0A539 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.29□□□□□ -2.04
TCRBV7S3A2A0A539 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.29□□□□□ -2.04
TCRBV7S3A2A0A539 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 147.3 ms