Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 SNORA28-201ENST00000606769 126 ntBASIC0□□□□□ -2.41
TRAV5A0A0B4J249 AL158211.2-201ENST00000607282 395 ntBASIC0□□□□□ -2.41
TRAV5A0A0B4J249 SEPT14P17-201ENST00000617978 177 ntBASIC0□□□□□ -2.41
TRAV5A0A0B4J249 RNA5SP62-201ENST00000363457 110 ntBASIC-0.01□□□□□ -2.41
TRAV5A0A0B4J249 RNU6-424P-201ENST00000384367 105 ntBASIC-0.01□□□□□ -2.41
TRAV5A0A0B4J249 SNORD105-201ENST00000386910 85 ntBASIC-0.01□□□□□ -2.41
TRAV5A0A0B4J249 RNA5SP219-201ENST00000390940 113 ntBASIC-0.01□□□□□ -2.41
TRAV5A0A0B4J249 MRPL42P2-201ENST00000403169 426 ntBASIC-0.01□□□□□ -2.41
TRAV5A0A0B4J249 MIR1197-201ENST00000408818 88 ntBASIC-0.01□□□□□ -2.41
TRAV5A0A0B4J249 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-0.01□□□□□ -2.41
TRAV5A0A0B4J249 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-0.01□□□□□ -2.41
TRAV5A0A0B4J249 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.01□□□□□ -2.41
TRAV5A0A0B4J249 AC009237.7-201ENST00000447357 229 ntBASIC-0.01□□□□□ -2.41
TRAV5A0A0B4J249 MTCO3P8-201ENST00000453691 755 ntBASIC-0.01□□□□□ -2.41
TRAV5A0A0B4J249 AC116562.3-201ENST00000506136 177 ntBASIC-0.01□□□□□ -2.41
TRAV5A0A0B4J249 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.01□□□□□ -2.41
TRAV5A0A0B4J249 RNU7-12P-201ENST00000516030 62 ntBASIC-0.01□□□□□ -2.41
TRAV5A0A0B4J249 AC068587.5-201ENST00000528506 175 ntBASIC-0.01□□□□□ -2.41
TRAV5A0A0B4J249 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.01□□□□□ -2.41
TRAV5A0A0B4J249 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
TRAV5A0A0B4J249 AP000907.4-201ENST00000604143 237 ntBASIC-0.01□□□□□ -2.41
TRAV5A0A0B4J249 SNRPGP20-201ENST00000604477 205 ntBASIC-0.01□□□□□ -2.41
TRAV5A0A0B4J249 LARP7P1-201ENST00000605576 316 ntBASIC-0.01□□□□□ -2.41
TRAV5A0A0B4J249 AL078595.3-201ENST00000623815 1166 ntBASIC-0.01□□□□□ -2.41
TRAV5A0A0B4J249 snoZ196.1-201ENST00000625269 89 ntBASIC-0.01□□□□□ -2.41
TRAV5A0A0B4J249 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.01□□□□□ -2.41
TRAV5A0A0B4J249 Y_RNA.302-201ENST00000364997 102 ntBASIC-0.02□□□□□ -2.41
TRAV5A0A0B4J249 SNORD115-7-201ENST00000365306 82 ntBASIC-0.02□□□□□ -2.41
TRAV5A0A0B4J249 MIR586-201ENST00000385035 97 ntBASIC-0.02□□□□□ -2.41
TRAV5A0A0B4J249 AC004866.1-201ENST00000411748 78 ntBASIC-0.02□□□□□ -2.41
TRAV5A0A0B4J249 MTATP6P16-201ENST00000434543 526 ntBASIC-0.02□□□□□ -2.41
TRAV5A0A0B4J249 RNU7-128P-201ENST00000517247 62 ntBASIC-0.02□□□□□ -2.41
TRAV5A0A0B4J249 AP003716.2-201ENST00000528260 108 ntBASIC-0.02□□□□□ -2.41
TRAV5A0A0B4J249 AC010620.1-201ENST00000601088 1102 ntBASIC-0.02□□□□□ -2.41
TRAV5A0A0B4J249 AC073544.1-201ENST00000600110 1595 ntBASIC-0.02□□□□□ -2.41
TRAV5A0A0B4J249 MIR411-201ENST00000362239 96 ntBASIC-0.03□□□□□ -2.41
TRAV5A0A0B4J249 SNORD114-16-201ENST00000363044 70 ntBASIC-0.03□□□□□ -2.41
TRAV5A0A0B4J249 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.03□□□□□ -2.41
TRAV5A0A0B4J249 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.03□□□□□ -2.41
TRAV5A0A0B4J249 RNU6-533P-201ENST00000384144 107 ntBASIC-0.03□□□□□ -2.41
TRAV5A0A0B4J249 RNU6-550P-201ENST00000391057 101 ntBASIC-0.03□□□□□ -2.41
TRAV5A0A0B4J249 MTND1P20-201ENST00000430341 950 ntBASIC-0.03□□□□□ -2.41
TRAV5A0A0B4J249 SNRPGP12-201ENST00000449481 213 ntBASIC-0.03□□□□□ -2.41
TRAV5A0A0B4J249 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-0.03□□□□□ -2.41
TRAV5A0A0B4J249 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.03□□□□□ -2.41
TRAV5A0A0B4J249 EIF1P4-201ENST00000572664 335 ntBASIC-0.03□□□□□ -2.41
TRAV5A0A0B4J249 MIR4300-201ENST00000581016 96 ntBASIC-0.03□□□□□ -2.41
TRAV5A0A0B4J249 MIR6718-201ENST00000616153 80 ntBASIC-0.03□□□□□ -2.41
TRAV5A0A0B4J249 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.03□□□□□ -2.41
TRAV5A0A0B4J249 AL078596.1-201ENST00000624856 447 ntBASIC-0.03□□□□□ -2.41
TRAV5A0A0B4J249 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-0.03□□□□□ -2.41
TRAV5A0A0B4J249 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
TRAV5A0A0B4J249 RNU6-1287P-201ENST00000362914 107 ntBASIC-0.04□□□□□ -2.42
TRAV5A0A0B4J249 SNORA25.3-201ENST00000363205 127 ntBASIC-0.04□□□□□ -2.42
TRAV5A0A0B4J249 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.04□□□□□ -2.42
TRAV5A0A0B4J249 RNU6-1060P-201ENST00000384664 107 ntBASIC-0.04□□□□□ -2.42
TRAV5A0A0B4J249 RNU2-72P-201ENST00000411175 163 ntBASIC-0.04□□□□□ -2.42
TRAV5A0A0B4J249 RPS27AP14-201ENST00000422868 454 ntBASIC-0.04□□□□□ -2.42
TRAV5A0A0B4J249 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.04□□□□□ -2.42
TRAV5A0A0B4J249 MTCO2P23-201ENST00000425216 680 ntBASIC-0.04□□□□□ -2.42
TRAV5A0A0B4J249 MTCO2P18-201ENST00000457151 658 ntBASIC-0.04□□□□□ -2.42
TRAV5A0A0B4J249 RNU7-94P-201ENST00000459576 63 ntBASIC-0.04□□□□□ -2.42
TRAV5A0A0B4J249 RNU7-99P-201ENST00000516271 62 ntBASIC-0.04□□□□□ -2.42
TRAV5A0A0B4J249 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-0.04□□□□□ -2.42
TRAV5A0A0B4J249 AL117336.2-201ENST00000602435 335 ntBASIC-0.04□□□□□ -2.42
TRAV5A0A0B4J249 AC122133.1-201ENST00000613964 233 ntBASIC-0.04□□□□□ -2.42
TRAV5A0A0B4J249 U6.114-201ENST00000636407 96 ntBASIC-0.04□□□□□ -2.42
TRAV5A0A0B4J249 AL390237.1-201ENST00000404226 1415 ntBASIC-0.04□□□□□ -2.42
TRAV5A0A0B4J249 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.05□□□□□ -2.42
TRAV5A0A0B4J249 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-0.05□□□□□ -2.42
TRAV5A0A0B4J249 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-0.05□□□□□ -2.42
TRAV5A0A0B4J249 RNU4-77P-201ENST00000516692 156 ntBASIC-0.05□□□□□ -2.42
TRAV5A0A0B4J249 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.05□□□□□ -2.42
TRAV5A0A0B4J249 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.05□□□□□ -2.42
TRAV5A0A0B4J249 AL162730.1-201ENST00000605734 292 ntBASIC-0.05□□□□□ -2.42
TRAV5A0A0B4J249 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
TRAV5A0A0B4J249 uc_338.34-201ENST00000617467 174 ntBASIC-0.05□□□□□ -2.42
TRAV5A0A0B4J249 AL109933.3-201ENST00000619095 188 ntBASIC-0.05□□□□□ -2.42
TRAV5A0A0B4J249 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.05□□□□□ -2.42
TRAV5A0A0B4J249 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.06□□□□□ -2.42
TRAV5A0A0B4J249 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.06□□□□□ -2.42
TRAV5A0A0B4J249 SNORD115.1-201ENST00000391109 76 ntBASIC-0.06□□□□□ -2.42
TRAV5A0A0B4J249 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.06□□□□□ -2.42
TRAV5A0A0B4J249 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.06□□□□□ -2.42
TRAV5A0A0B4J249 AC004854.1-201ENST00000440356 349 ntBASIC-0.06□□□□□ -2.42
TRAV5A0A0B4J249 AC093019.1-201ENST00000443135 252 ntBASIC-0.06□□□□□ -2.42
TRAV5A0A0B4J249 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-0.06□□□□□ -2.42
TRAV5A0A0B4J249 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.06□□□□□ -2.42
TRAV5A0A0B4J249 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.06□□□□□ -2.42
TRAV5A0A0B4J249 RNU6-221P-201ENST00000459541 99 ntBASIC-0.06□□□□□ -2.42
TRAV5A0A0B4J249 HMGN1P10-201ENST00000474557 553 ntBASIC-0.06□□□□□ -2.42
TRAV5A0A0B4J249 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.06□□□□□ -2.42
TRAV5A0A0B4J249 RNU1-117P-201ENST00000517041 158 ntBASIC-0.06□□□□□ -2.42
TRAV5A0A0B4J249 RNU6-1220P-201ENST00000517126 108 ntBASIC-0.06□□□□□ -2.42
TRAV5A0A0B4J249 AF235103.2-201ENST00000525753 346 ntBASIC-0.06□□□□□ -2.42
TRAV5A0A0B4J249 MIR5190-201ENST00000581537 80 ntBASIC-0.06□□□□□ -2.42
TRAV5A0A0B4J249 U6.73-201ENST00000619194 103 ntBASIC-0.06□□□□□ -2.42
TRAV5A0A0B4J249 MIR6079-201ENST00000635807 62 ntBASIC-0.06□□□□□ -2.42
TRAV5A0A0B4J249 MIR4315-1-201ENST00000636800 73 ntBASIC-0.06□□□□□ -2.42
TRAV5A0A0B4J249 MIR4315-2-201ENST00000640925 73 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms