Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.01□□□□□ -2.25
COMMD3-BMI1R4GMX3 AC007834.2-201ENST00000536310 343 ntBASIC1.01□□□□□ -2.25
COMMD3-BMI1R4GMX3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.01□□□□□ -2.25
COMMD3-BMI1R4GMX3 AL157687.1-201ENST00000554853 619 ntBASIC1.01□□□□□ -2.25
COMMD3-BMI1R4GMX3 AC136932.1-201ENST00000574771 208 ntBASIC1.01□□□□□ -2.25
COMMD3-BMI1R4GMX3 CPDP1-201ENST00000579660 283 ntBASIC1.01□□□□□ -2.25
COMMD3-BMI1R4GMX3 AC092747.3-201ENST00000603769 301 ntBASIC1.01□□□□□ -2.25
COMMD3-BMI1R4GMX3 AP000907.4-201ENST00000604143 237 ntBASIC1.01□□□□□ -2.25
COMMD3-BMI1R4GMX3 MIR6078-201ENST00000611069 100 ntBASIC1.01□□□□□ -2.25
COMMD3-BMI1R4GMX3 AC040896.1-201ENST00000613819 479 ntBASIC1.01□□□□□ -2.25
COMMD3-BMI1R4GMX3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1□□□□□ -2.25
COMMD3-BMI1R4GMX3 RNU6-1187P-201ENST00000364771 110 ntBASIC1□□□□□ -2.25
COMMD3-BMI1R4GMX3 RNU6-392P-201ENST00000364926 101 ntBASIC1□□□□□ -2.25
COMMD3-BMI1R4GMX3 RNU6-38P-201ENST00000384085 107 ntBASIC1□□□□□ -2.25
COMMD3-BMI1R4GMX3 RNY3P9-201ENST00000384727 106 ntBASIC1□□□□□ -2.25
COMMD3-BMI1R4GMX3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1□□□□□ -2.25
COMMD3-BMI1R4GMX3 SNORD37.1-201ENST00000390968 65 ntBASIC1□□□□□ -2.25
COMMD3-BMI1R4GMX3 RNU4-55P-201ENST00000410731 137 ntBASIC1□□□□□ -2.25
COMMD3-BMI1R4GMX3 RNA5SP247-201ENST00000411181 105 ntBASIC1□□□□□ -2.25
COMMD3-BMI1R4GMX3 AC008134.1-201ENST00000420943 193 ntBASIC1□□□□□ -2.25
COMMD3-BMI1R4GMX3 AL353193.1-201ENST00000421444 268 ntBASIC1□□□□□ -2.25
COMMD3-BMI1R4GMX3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1□□□□□ -2.25
COMMD3-BMI1R4GMX3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1□□□□□ -2.25
COMMD3-BMI1R4GMX3 RNA5SP401-201ENST00000515920 127 ntBASIC1□□□□□ -2.25
COMMD3-BMI1R4GMX3 SNORA19.2-201ENST00000516013 114 ntBASIC1□□□□□ -2.25
COMMD3-BMI1R4GMX3 RNU6-1198P-201ENST00000516904 67 ntBASIC1□□□□□ -2.25
COMMD3-BMI1R4GMX3 AC104383.1-201ENST00000530297 370 ntBASIC1□□□□□ -2.25
COMMD3-BMI1R4GMX3 OSBPL9P5-201ENST00000542581 171 ntBASIC1□□□□□ -2.25
COMMD3-BMI1R4GMX3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1□□□□□ -2.25
COMMD3-BMI1R4GMX3 AC016727.2-201ENST00000603988 621 ntBASIC1□□□□□ -2.25
COMMD3-BMI1R4GMX3 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1□□□□□ -2.25
COMMD3-BMI1R4GMX3 AL022345.2-201ENST00000606307 135 ntBASIC1□□□□□ -2.25
COMMD3-BMI1R4GMX3 AL357078.3-201ENST00000607528 618 ntBASIC1□□□□□ -2.25
COMMD3-BMI1R4GMX3 AC064836.2-201ENST00000609491 462 ntBASIC1□□□□□ -2.25
COMMD3-BMI1R4GMX3 AC008873.1-201ENST00000625051 138 ntBASIC1□□□□□ -2.25
COMMD3-BMI1R4GMX3 FER-210ENST00000628534 558 ntTSL 5 BASIC1□□□□□ -2.25
COMMD3-BMI1R4GMX3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
COMMD3-BMI1R4GMX3 RNU6-1123P-201ENST00000362347 106 ntBASIC0.99□□□□□ -2.25
COMMD3-BMI1R4GMX3 RNU6-245P-201ENST00000384020 107 ntBASIC0.99□□□□□ -2.25
COMMD3-BMI1R4GMX3 RNU6-1042P-201ENST00000384204 107 ntBASIC0.99□□□□□ -2.25
COMMD3-BMI1R4GMX3 Y_RNA.553-201ENST00000384670 102 ntBASIC0.99□□□□□ -2.25
COMMD3-BMI1R4GMX3 TIMM9P3-201ENST00000428659 274 ntBASIC0.99□□□□□ -2.25
COMMD3-BMI1R4GMX3 USP9YP14-201ENST00000430663 563 ntBASIC0.99□□□□□ -2.25
COMMD3-BMI1R4GMX3 snoU13.6-201ENST00000458785 104 ntBASIC0.99□□□□□ -2.25
COMMD3-BMI1R4GMX3 RNU6-1208P-201ENST00000459588 107 ntBASIC0.99□□□□□ -2.25
COMMD3-BMI1R4GMX3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.99□□□□□ -2.25
COMMD3-BMI1R4GMX3 CYCSP23-201ENST00000519781 313 ntBASIC0.99□□□□□ -2.25
COMMD3-BMI1R4GMX3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.99□□□□□ -2.25
COMMD3-BMI1R4GMX3 MRPS36P4-201ENST00000534436 298 ntBASIC0.99□□□□□ -2.25
COMMD3-BMI1R4GMX3 MIR3664-201ENST00000579074 99 ntBASIC0.99□□□□□ -2.25
COMMD3-BMI1R4GMX3 MIR5692C1-201ENST00000585309 91 ntBASIC0.99□□□□□ -2.25
COMMD3-BMI1R4GMX3 AC139792.3-201ENST00000623525 224 ntBASIC0.99□□□□□ -2.25
COMMD3-BMI1R4GMX3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.99□□□□□ -2.25
COMMD3-BMI1R4GMX3 Y_RNA.123-201ENST00000363338 102 ntBASIC0.98□□□□□ -2.25
COMMD3-BMI1R4GMX3 SNORD115-8-201ENST00000363856 82 ntBASIC0.98□□□□□ -2.25
COMMD3-BMI1R4GMX3 RNU6-1317P-201ENST00000364582 104 ntBASIC0.98□□□□□ -2.25
COMMD3-BMI1R4GMX3 SNORD115-38-201ENST00000365037 82 ntBASIC0.98□□□□□ -2.25
COMMD3-BMI1R4GMX3 SNORA25.9-201ENST00000365087 128 ntBASIC0.98□□□□□ -2.25
COMMD3-BMI1R4GMX3 RNU4-66P-201ENST00000365199 138 ntBASIC0.98□□□□□ -2.25
COMMD3-BMI1R4GMX3 SNORA4.2-201ENST00000365313 147 ntBASIC0.98□□□□□ -2.25
COMMD3-BMI1R4GMX3 RNA5SP259-201ENST00000365541 109 ntBASIC0.98□□□□□ -2.25
COMMD3-BMI1R4GMX3 RNU6-933P-201ENST00000384424 107 ntBASIC0.98□□□□□ -2.25
COMMD3-BMI1R4GMX3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
COMMD3-BMI1R4GMX3 AL663109.1-201ENST00000411498 844 ntBASIC0.98□□□□□ -2.25
COMMD3-BMI1R4GMX3 MTCO1P20-201ENST00000425366 358 ntBASIC0.98□□□□□ -2.25
COMMD3-BMI1R4GMX3 MTND3P9-201ENST00000429526 346 ntBASIC0.98□□□□□ -2.25
COMMD3-BMI1R4GMX3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.98□□□□□ -2.25
COMMD3-BMI1R4GMX3 AC025423.5-201ENST00000550230 219 ntBASIC0.98□□□□□ -2.25
COMMD3-BMI1R4GMX3 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.98□□□□□ -2.25
COMMD3-BMI1R4GMX3 MIR3974-201ENST00000637126 96 ntBASIC0.98□□□□□ -2.25
COMMD3-BMI1R4GMX3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
COMMD3-BMI1R4GMX3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.97□□□□□ -2.25
COMMD3-BMI1R4GMX3 ELL2P3-201ENST00000457883 1602 ntBASIC0.97□□□□□ -2.25
COMMD3-BMI1R4GMX3 RNU6-137P-201ENST00000363680 108 ntBASIC0.97□□□□□ -2.25
COMMD3-BMI1R4GMX3 RNU5F-3P-201ENST00000363767 117 ntBASIC0.97□□□□□ -2.25
COMMD3-BMI1R4GMX3 RNU6-128P-201ENST00000383976 107 ntBASIC0.97□□□□□ -2.25
COMMD3-BMI1R4GMX3 CALM2P3-201ENST00000400429 449 ntBASIC0.97□□□□□ -2.25
COMMD3-BMI1R4GMX3 MIR1253-201ENST00000408273 105 ntBASIC0.97□□□□□ -2.25
COMMD3-BMI1R4GMX3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.97□□□□□ -2.25
COMMD3-BMI1R4GMX3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.97□□□□□ -2.25
COMMD3-BMI1R4GMX3 NDUFB4P10-201ENST00000452541 359 ntBASIC0.97□□□□□ -2.25
COMMD3-BMI1R4GMX3 AC093852.1-201ENST00000503587 266 ntBASIC0.97□□□□□ -2.25
COMMD3-BMI1R4GMX3 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.97□□□□□ -2.25
COMMD3-BMI1R4GMX3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.97□□□□□ -2.25
COMMD3-BMI1R4GMX3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.97□□□□□ -2.25
COMMD3-BMI1R4GMX3 AC009509.4-201ENST00000619202 509 ntBASIC0.97□□□□□ -2.25
COMMD3-BMI1R4GMX3 OR5AK4P-201ENST00000635912 903 ntBASIC0.97□□□□□ -2.25
COMMD3-BMI1R4GMX3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
COMMD3-BMI1R4GMX3 MIR222-201ENST00000384992 110 ntBASIC0.96□□□□□ -2.26
COMMD3-BMI1R4GMX3 MIR514A2-201ENST00000385131 88 ntBASIC0.96□□□□□ -2.26
COMMD3-BMI1R4GMX3 MIR514A3-201ENST00000385132 88 ntBASIC0.96□□□□□ -2.26
COMMD3-BMI1R4GMX3 HMGN2P34-201ENST00000437647 269 ntBASIC0.96□□□□□ -2.26
COMMD3-BMI1R4GMX3 AC016717.1-201ENST00000448918 286 ntBASIC0.96□□□□□ -2.26
COMMD3-BMI1R4GMX3 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.96□□□□□ -2.26
COMMD3-BMI1R4GMX3 MTCO3P8-201ENST00000453691 755 ntBASIC0.96□□□□□ -2.26
COMMD3-BMI1R4GMX3 RNU7-57P-201ENST00000459540 60 ntBASIC0.96□□□□□ -2.26
COMMD3-BMI1R4GMX3 RPL39P28-201ENST00000465655 155 ntBASIC0.96□□□□□ -2.26
COMMD3-BMI1R4GMX3 HMGN1P12-201ENST00000499125 195 ntBASIC0.96□□□□□ -2.26
COMMD3-BMI1R4GMX3 RPL39P5-202ENST00000512505 151 ntBASIC0.96□□□□□ -2.26
COMMD3-BMI1R4GMX3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms