Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 RNU1-72P-201ENST00000362976 153 ntBASIC2.98□□□□□ -1.93
NR2E3Q9Y5X4 RNU6-318P-201ENST00000384283 103 ntBASIC2.98□□□□□ -1.93
NR2E3Q9Y5X4 MIR181A2-201ENST00000384863 110 ntBASIC2.98□□□□□ -1.93
NR2E3Q9Y5X4 MIR218-1-201ENST00000384999 110 ntBASIC2.98□□□□□ -1.93
NR2E3Q9Y5X4 RNU1-139P-201ENST00000391307 165 ntBASIC2.98□□□□□ -1.93
NR2E3Q9Y5X4 RPL21P38-201ENST00000418090 167 ntBASIC2.98□□□□□ -1.93
NR2E3Q9Y5X4 USP9YP16-201ENST00000430287 407 ntBASIC2.98□□□□□ -1.93
NR2E3Q9Y5X4 RPS29P6-201ENST00000438196 145 ntBASIC2.98□□□□□ -1.93
NR2E3Q9Y5X4 USP9YP23-201ENST00000455085 407 ntBASIC2.98□□□□□ -1.93
NR2E3Q9Y5X4 RNU7-87P-201ENST00000459343 62 ntBASIC2.98□□□□□ -1.93
NR2E3Q9Y5X4 AP000870.1-201ENST00000472927 406 ntBASIC2.98□□□□□ -1.93
NR2E3Q9Y5X4 AC098869.1-201ENST00000481627 292 ntBASIC2.98□□□□□ -1.93
NR2E3Q9Y5X4 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.98□□□□□ -1.93
NR2E3Q9Y5X4 RNU6-1012P-201ENST00000516606 109 ntBASIC2.98□□□□□ -1.93
NR2E3Q9Y5X4 RNU6-794P-201ENST00000517261 64 ntBASIC2.98□□□□□ -1.93
NR2E3Q9Y5X4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.98□□□□□ -1.93
NR2E3Q9Y5X4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.98□□□□□ -1.93
NR2E3Q9Y5X4 AC136932.1-201ENST00000574771 208 ntBASIC2.98□□□□□ -1.93
NR2E3Q9Y5X4 AC023043.3-201ENST00000593113 385 ntBASIC2.98□□□□□ -1.93
NR2E3Q9Y5X4 RPS29P30-201ENST00000600975 111 ntBASIC2.98□□□□□ -1.93
NR2E3Q9Y5X4 PCGEM1.1-201ENST00000613431 131 ntBASIC2.98□□□□□ -1.93
NR2E3Q9Y5X4 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.98□□□□□ -1.93
NR2E3Q9Y5X4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NR2E3Q9Y5X4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
NR2E3Q9Y5X4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.98□□□□□ -1.93
NR2E3Q9Y5X4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
NR2E3Q9Y5X4 SNORD114-1-201ENST00000362705 72 ntBASIC2.97□□□□□ -1.93
NR2E3Q9Y5X4 RNU1-35P-201ENST00000362782 153 ntBASIC2.97□□□□□ -1.93
NR2E3Q9Y5X4 RNU6-379P-201ENST00000363813 104 ntBASIC2.97□□□□□ -1.93
NR2E3Q9Y5X4 Y_RNA.183-201ENST00000363882 113 ntBASIC2.97□□□□□ -1.93
NR2E3Q9Y5X4 RNU6-1318P-201ENST00000365389 103 ntBASIC2.97□□□□□ -1.93
NR2E3Q9Y5X4 Y_RNA.461-201ENST00000384263 103 ntBASIC2.97□□□□□ -1.93
NR2E3Q9Y5X4 RNU6-1093P-201ENST00000391194 107 ntBASIC2.97□□□□□ -1.93
NR2E3Q9Y5X4 AL590004.2-201ENST00000404787 371 ntBASIC2.97□□□□□ -1.93
NR2E3Q9Y5X4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.97□□□□□ -1.93
NR2E3Q9Y5X4 AC007215.1-201ENST00000464893 276 ntBASIC2.97□□□□□ -1.93
NR2E3Q9Y5X4 AC145146.1-201ENST00000496370 254 ntBASIC2.97□□□□□ -1.93
NR2E3Q9Y5X4 AC023141.11-201ENST00000508864 202 ntBASIC2.97□□□□□ -1.93
NR2E3Q9Y5X4 RNU6-1114P-201ENST00000516022 107 ntBASIC2.97□□□□□ -1.93
NR2E3Q9Y5X4 RNY3P15-201ENST00000516297 97 ntBASIC2.97□□□□□ -1.93
NR2E3Q9Y5X4 RNU6-1271P-201ENST00000517049 105 ntBASIC2.97□□□□□ -1.93
NR2E3Q9Y5X4 RNU6-58P-201ENST00000517143 103 ntBASIC2.97□□□□□ -1.93
NR2E3Q9Y5X4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.97□□□□□ -1.93
NR2E3Q9Y5X4 AL356575.1-201ENST00000603008 283 ntBASIC2.97□□□□□ -1.93
NR2E3Q9Y5X4 AC090425.1-201ENST00000610007 140 ntBASIC2.97□□□□□ -1.93
NR2E3Q9Y5X4 AC130454.1-201ENST00000622948 401 ntBASIC2.97□□□□□ -1.93
NR2E3Q9Y5X4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.97□□□□□ -1.93
NR2E3Q9Y5X4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
NR2E3Q9Y5X4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
NR2E3Q9Y5X4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.96□□□□□ -1.94
NR2E3Q9Y5X4 U3.9-201ENST00000363823 204 ntBASIC2.96□□□□□ -1.94
NR2E3Q9Y5X4 RNU6-461P-201ENST00000364195 107 ntBASIC2.96□□□□□ -1.94
NR2E3Q9Y5X4 RNU6-378P-201ENST00000384324 107 ntBASIC2.96□□□□□ -1.94
NR2E3Q9Y5X4 MIR1287-201ENST00000408492 90 ntBASIC2.96□□□□□ -1.94
NR2E3Q9Y5X4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.96□□□□□ -1.94
NR2E3Q9Y5X4 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.96□□□□□ -1.94
NR2E3Q9Y5X4 SDAD1P3-201ENST00000427380 333 ntBASIC2.96□□□□□ -1.94
NR2E3Q9Y5X4 SNORD127-201ENST00000458892 86 ntBASIC2.96□□□□□ -1.94
NR2E3Q9Y5X4 RNU6-826P-201ENST00000516827 104 ntBASIC2.96□□□□□ -1.94
NR2E3Q9Y5X4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.96□□□□□ -1.94
NR2E3Q9Y5X4 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.96□□□□□ -1.94
NR2E3Q9Y5X4 EIF4A1P12-201ENST00000551910 141 ntBASIC2.96□□□□□ -1.94
NR2E3Q9Y5X4 AL713866.2-201ENST00000603579 219 ntBASIC2.96□□□□□ -1.94
NR2E3Q9Y5X4 U4.3-201ENST00000621047 82 ntBASIC2.96□□□□□ -1.94
NR2E3Q9Y5X4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.96□□□□□ -1.94
NR2E3Q9Y5X4 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
NR2E3Q9Y5X4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
NR2E3Q9Y5X4 AL161431.1-201ENST00000618966 4205 ntBASIC2.95□□□□□ -1.94
NR2E3Q9Y5X4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.95□□□□□ -1.94
NR2E3Q9Y5X4 RNU6-1026P-201ENST00000384465 108 ntBASIC2.95□□□□□ -1.94
NR2E3Q9Y5X4 MIR10B-201ENST00000385011 110 ntBASIC2.95□□□□□ -1.94
NR2E3Q9Y5X4 SNORA46.1-201ENST00000391069 153 ntBASIC2.95□□□□□ -1.94
NR2E3Q9Y5X4 RNU6-159P-201ENST00000391080 106 ntBASIC2.95□□□□□ -1.94
NR2E3Q9Y5X4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.95□□□□□ -1.94
NR2E3Q9Y5X4 RNU6-56P-201ENST00000516986 93 ntBASIC2.95□□□□□ -1.94
NR2E3Q9Y5X4 AP003733.2-201ENST00000529409 171 ntBASIC2.95□□□□□ -1.94
NR2E3Q9Y5X4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.95□□□□□ -1.94
NR2E3Q9Y5X4 HSPE1P20-201ENST00000538133 289 ntBASIC2.95□□□□□ -1.94
NR2E3Q9Y5X4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.95□□□□□ -1.94
NR2E3Q9Y5X4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.95□□□□□ -1.94
NR2E3Q9Y5X4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.95□□□□□ -1.94
NR2E3Q9Y5X4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.95□□□□□ -1.94
NR2E3Q9Y5X4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.95□□□□□ -1.94
NR2E3Q9Y5X4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
NR2E3Q9Y5X4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
NR2E3Q9Y5X4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NR2E3Q9Y5X4 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
NR2E3Q9Y5X4 snoU2_19.2-201ENST00000363024 80 ntBASIC2.94□□□□□ -1.94
NR2E3Q9Y5X4 RNU5F-3P-201ENST00000363767 117 ntBASIC2.94□□□□□ -1.94
NR2E3Q9Y5X4 Y_RNA.447-201ENST00000384184 113 ntBASIC2.94□□□□□ -1.94
NR2E3Q9Y5X4 Y_RNA.562-201ENST00000384695 113 ntBASIC2.94□□□□□ -1.94
NR2E3Q9Y5X4 MIR215-201ENST00000384858 110 ntBASIC2.94□□□□□ -1.94
NR2E3Q9Y5X4 MIR27B-201ENST00000385129 97 ntBASIC2.94□□□□□ -1.94
NR2E3Q9Y5X4 SNORD115-46-201ENST00000390982 71 ntBASIC2.94□□□□□ -1.94
NR2E3Q9Y5X4 AL079342.1-201ENST00000401460 267 ntBASIC2.94□□□□□ -1.94
NR2E3Q9Y5X4 RPL19P1-201ENST00000411635 428 ntBASIC2.94□□□□□ -1.94
NR2E3Q9Y5X4 AC007064.1-201ENST00000412238 351 ntBASIC2.94□□□□□ -1.94
NR2E3Q9Y5X4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.94□□□□□ -1.94
NR2E3Q9Y5X4 AC096638.1-201ENST00000444678 216 ntBASIC2.94□□□□□ -1.94
NR2E3Q9Y5X4 AC022868.1-201ENST00000517767 391 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms