Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 CYCSP26-201ENST00000534107 320 ntBASIC2.32□□□□□ -2.04
CLDN16Q9Y5I7 MIR5694-201ENST00000581190 76 ntBASIC2.32□□□□□ -2.04
CLDN16Q9Y5I7 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.32□□□□□ -2.04
CLDN16Q9Y5I7 Y_RNA.812-201ENST00000610788 101 ntBASIC2.32□□□□□ -2.04
CLDN16Q9Y5I7 Y_RNA.784-201ENST00000613803 101 ntBASIC2.32□□□□□ -2.04
CLDN16Q9Y5I7 Y_RNA.787-201ENST00000616522 101 ntBASIC2.32□□□□□ -2.04
CLDN16Q9Y5I7 Y_RNA.780-201ENST00000617336 101 ntBASIC2.32□□□□□ -2.04
CLDN16Q9Y5I7 AC007742.2-201ENST00000618226 398 ntBASIC2.32□□□□□ -2.04
CLDN16Q9Y5I7 Y_RNA.801-201ENST00000619005 101 ntBASIC2.32□□□□□ -2.04
CLDN16Q9Y5I7 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.32□□□□□ -2.04
CLDN16Q9Y5I7 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CLDN16Q9Y5I7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
CLDN16Q9Y5I7 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.31□□□□□ -2.04
CLDN16Q9Y5I7 AC016717.2-201ENST00000609089 5141 ntBASIC2.31□□□□□ -2.04
CLDN16Q9Y5I7 RNU6-545P-201ENST00000362681 104 ntBASIC2.31□□□□□ -2.04
CLDN16Q9Y5I7 RNU6-1301P-201ENST00000362724 104 ntBASIC2.31□□□□□ -2.04
CLDN16Q9Y5I7 RNU6-1305P-201ENST00000364353 104 ntBASIC2.31□□□□□ -2.04
CLDN16Q9Y5I7 Y_RNA.389-201ENST00000383924 113 ntBASIC2.31□□□□□ -2.04
CLDN16Q9Y5I7 RNU6-708P-201ENST00000384217 107 ntBASIC2.31□□□□□ -2.04
CLDN16Q9Y5I7 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CLDN16Q9Y5I7 RNA5SP213-201ENST00000391031 106 ntBASIC2.31□□□□□ -2.04
CLDN16Q9Y5I7 AL359511.1-201ENST00000402970 211 ntBASIC2.31□□□□□ -2.04
CLDN16Q9Y5I7 AC004866.1-201ENST00000411748 78 ntBASIC2.31□□□□□ -2.04
CLDN16Q9Y5I7 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.31□□□□□ -2.04
CLDN16Q9Y5I7 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.31□□□□□ -2.04
CLDN16Q9Y5I7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.31□□□□□ -2.04
CLDN16Q9Y5I7 AL513328.1-201ENST00000446460 224 ntBASIC2.31□□□□□ -2.04
CLDN16Q9Y5I7 AC018868.1-201ENST00000491307 315 ntBASIC2.31□□□□□ -2.04
CLDN16Q9Y5I7 RNU6-475P-201ENST00000516073 104 ntBASIC2.31□□□□□ -2.04
CLDN16Q9Y5I7 SNORA40.14-201ENST00000516543 86 ntBASIC2.31□□□□□ -2.04
CLDN16Q9Y5I7 RNU6-107P-201ENST00000516643 102 ntBASIC2.31□□□□□ -2.04
CLDN16Q9Y5I7 AP002770.2-201ENST00000543613 532 ntBASIC2.31□□□□□ -2.04
CLDN16Q9Y5I7 RRN3P3-201ENST00000549207 578 ntBASIC2.31□□□□□ -2.04
CLDN16Q9Y5I7 AC121758.2-201ENST00000553271 193 ntBASIC2.31□□□□□ -2.04
CLDN16Q9Y5I7 MZT1P2-201ENST00000604387 248 ntBASIC2.31□□□□□ -2.04
CLDN16Q9Y5I7 SNORD11B-201ENST00000607707 90 ntBASIC2.31□□□□□ -2.04
CLDN16Q9Y5I7 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.31□□□□□ -2.04
CLDN16Q9Y5I7 MIR6895-201ENST00000613497 78 ntBASIC2.31□□□□□ -2.04
CLDN16Q9Y5I7 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.31□□□□□ -2.04
CLDN16Q9Y5I7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CLDN16Q9Y5I7 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CLDN16Q9Y5I7 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
CLDN16Q9Y5I7 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CLDN16Q9Y5I7 MIR449A-201ENST00000362113 91 ntBASIC2.3□□□□□ -2.04
CLDN16Q9Y5I7 Y_RNA.326-201ENST00000365176 113 ntBASIC2.3□□□□□ -2.04
CLDN16Q9Y5I7 Y_RNA.422-201ENST00000384054 114 ntBASIC2.3□□□□□ -2.04
CLDN16Q9Y5I7 RNU6-318P-201ENST00000384283 103 ntBASIC2.3□□□□□ -2.04
CLDN16Q9Y5I7 Y_RNA.526-201ENST00000384572 110 ntBASIC2.3□□□□□ -2.04
CLDN16Q9Y5I7 MIR329-1-201ENST00000385028 80 ntBASIC2.3□□□□□ -2.04
CLDN16Q9Y5I7 RNU6-101P-201ENST00000410323 104 ntBASIC2.3□□□□□ -2.04
CLDN16Q9Y5I7 SNORD12B-201ENST00000410433 91 ntBASIC2.3□□□□□ -2.04
CLDN16Q9Y5I7 UQCRBP2-201ENST00000447827 297 ntBASIC2.3□□□□□ -2.04
CLDN16Q9Y5I7 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.3□□□□□ -2.04
CLDN16Q9Y5I7 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.3□□□□□ -2.04
CLDN16Q9Y5I7 ATP5EP1-201ENST00000510257 156 ntBASIC2.3□□□□□ -2.04
CLDN16Q9Y5I7 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.3□□□□□ -2.04
CLDN16Q9Y5I7 RNU6-344P-201ENST00000516635 111 ntBASIC2.3□□□□□ -2.04
CLDN16Q9Y5I7 AC034114.1-201ENST00000520293 285 ntBASIC2.3□□□□□ -2.04
CLDN16Q9Y5I7 AC040926.1-201ENST00000530195 238 ntBASIC2.3□□□□□ -2.04
CLDN16Q9Y5I7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.3□□□□□ -2.04
CLDN16Q9Y5I7 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.3□□□□□ -2.04
CLDN16Q9Y5I7 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.3□□□□□ -2.04
CLDN16Q9Y5I7 MIR4753-201ENST00000585119 83 ntBASIC2.3□□□□□ -2.04
CLDN16Q9Y5I7 AC006504.6-201ENST00000590142 199 ntBASIC2.3□□□□□ -2.04
CLDN16Q9Y5I7 AC124312.5-201ENST00000604451 268 ntBASIC2.3□□□□□ -2.04
CLDN16Q9Y5I7 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.3□□□□□ -2.04
CLDN16Q9Y5I7 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.3□□□□□ -2.04
CLDN16Q9Y5I7 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
CLDN16Q9Y5I7 AC245060.5-201ENST00000610778 3293 ntBASIC2.3□□□□□ -2.04
CLDN16Q9Y5I7 RNU4-82P-201ENST00000362443 140 ntBASIC2.29□□□□□ -2.04
CLDN16Q9Y5I7 Y_RNA.27-201ENST00000362540 103 ntBASIC2.29□□□□□ -2.04
CLDN16Q9Y5I7 SNORA25.6-201ENST00000364121 118 ntBASIC2.29□□□□□ -2.04
CLDN16Q9Y5I7 SNORD31B-201ENST00000364977 69 ntBASIC2.29□□□□□ -2.04
CLDN16Q9Y5I7 RNY3P4-201ENST00000384428 101 ntBASIC2.29□□□□□ -2.04
CLDN16Q9Y5I7 Y_RNA.500-201ENST00000384466 111 ntBASIC2.29□□□□□ -2.04
CLDN16Q9Y5I7 MIR300-201ENST00000401138 83 ntBASIC2.29□□□□□ -2.04
CLDN16Q9Y5I7 RN7SKP49-201ENST00000516675 260 ntBASIC2.29□□□□□ -2.04
CLDN16Q9Y5I7 IGLV3-17-201ENST00000519099 244 ntBASIC2.29□□□□□ -2.04
CLDN16Q9Y5I7 AC007229.1-201ENST00000590455 412 ntBASIC2.29□□□□□ -2.04
CLDN16Q9Y5I7 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.29□□□□□ -2.04
CLDN16Q9Y5I7 AL078596.1-201ENST00000624856 447 ntBASIC2.29□□□□□ -2.04
CLDN16Q9Y5I7 CTSLP2-204ENST00000629029 392 ntBASIC2.29□□□□□ -2.04
CLDN16Q9Y5I7 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
CLDN16Q9Y5I7 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CLDN16Q9Y5I7 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
CLDN16Q9Y5I7 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
CLDN16Q9Y5I7 RNA5SP289-201ENST00000362332 137 ntBASIC2.28□□□□□ -2.04
CLDN16Q9Y5I7 Y_RNA.158-201ENST00000363651 101 ntBASIC2.28□□□□□ -2.04
CLDN16Q9Y5I7 RNU6-450P-201ENST00000364654 107 ntBASIC2.28□□□□□ -2.04
CLDN16Q9Y5I7 SNORD87-201ENST00000364849 89 ntBASIC2.28□□□□□ -2.04
CLDN16Q9Y5I7 Y_RNA.415-201ENST00000384012 112 ntBASIC2.28□□□□□ -2.04
CLDN16Q9Y5I7 RNU6-1145P-201ENST00000384246 107 ntBASIC2.28□□□□□ -2.04
CLDN16Q9Y5I7 SNORD78.2-201ENST00000391076 69 ntBASIC2.28□□□□□ -2.04
CLDN16Q9Y5I7 MIR1283-1-201ENST00000408494 87 ntBASIC2.28□□□□□ -2.04
CLDN16Q9Y5I7 RNU2-48P-201ENST00000410694 191 ntBASIC2.28□□□□□ -2.04
CLDN16Q9Y5I7 IPO7P1-201ENST00000442031 636 ntBASIC2.28□□□□□ -2.04
CLDN16Q9Y5I7 AC007395.1-201ENST00000451333 677 ntBASIC2.28□□□□□ -2.04
CLDN16Q9Y5I7 PCNPP5-201ENST00000452246 481 ntBASIC2.28□□□□□ -2.04
CLDN16Q9Y5I7 AL137159.1-201ENST00000452808 512 ntBASIC2.28□□□□□ -2.04
CLDN16Q9Y5I7 AC112492.4-201ENST00000456549 352 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms