Protein–RNA interactions for Protein: Q9Y5H6

PCDHA8, Protocadherin alpha-8, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA8Q9Y5H6 SNORA12-201ENST00000391162 147 ntBASIC3.21□□□□□ -1.9
PCDHA8Q9Y5H6 RNU6-1328P-201ENST00000410938 106 ntBASIC3.21□□□□□ -1.9
PCDHA8Q9Y5H6 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDHA8Q9Y5H6 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHA8Q9Y5H6 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHA8Q9Y5H6 AC003982.1-202ENST00000469928 248 ntBASIC3.21□□□□□ -1.9
PCDHA8Q9Y5H6 AC140059.1-201ENST00000489238 361 ntBASIC3.21□□□□□ -1.9
PCDHA8Q9Y5H6 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHA8Q9Y5H6 RNU4-71P-201ENST00000516258 113 ntBASIC3.21□□□□□ -1.9
PCDHA8Q9Y5H6 SCARNA3-201ENST00000517097 143 ntBASIC3.21□□□□□ -1.9
PCDHA8Q9Y5H6 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.21□□□□□ -1.9
PCDHA8Q9Y5H6 ELOCP29-201ENST00000588193 334 ntBASIC3.21□□□□□ -1.9
PCDHA8Q9Y5H6 AC010620.2-201ENST00000600135 313 ntBASIC3.21□□□□□ -1.9
PCDHA8Q9Y5H6 MIR6852-201ENST00000621699 66 ntBASIC3.21□□□□□ -1.9
PCDHA8Q9Y5H6 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHA8Q9Y5H6 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.2□□□□□ -1.9
PCDHA8Q9Y5H6 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHA8Q9Y5H6 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
PCDHA8Q9Y5H6 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHA8Q9Y5H6 Y_RNA.54-201ENST00000362766 105 ntBASIC3.2□□□□□ -1.9
PCDHA8Q9Y5H6 Y_RNA.136-201ENST00000363444 102 ntBASIC3.2□□□□□ -1.9
PCDHA8Q9Y5H6 Y_RNA.277-201ENST00000364754 102 ntBASIC3.2□□□□□ -1.9
PCDHA8Q9Y5H6 RNU6-1264P-201ENST00000383891 107 ntBASIC3.2□□□□□ -1.9
PCDHA8Q9Y5H6 MIR181B1-201ENST00000385240 110 ntBASIC3.2□□□□□ -1.9
PCDHA8Q9Y5H6 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.2□□□□□ -1.9
PCDHA8Q9Y5H6 Y_RNA.597-201ENST00000410463 100 ntBASIC3.2□□□□□ -1.9
PCDHA8Q9Y5H6 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.2□□□□□ -1.9
PCDHA8Q9Y5H6 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.2□□□□□ -1.9
PCDHA8Q9Y5H6 AC105272.1-201ENST00000438604 198 ntBASIC3.2□□□□□ -1.9
PCDHA8Q9Y5H6 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDHA8Q9Y5H6 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.2□□□□□ -1.9
PCDHA8Q9Y5H6 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDHA8Q9Y5H6 AC009779.6-201ENST00000603972 165 ntBASIC3.2□□□□□ -1.9
PCDHA8Q9Y5H6 IGHVIII-44-202ENST00000636235 289 ntBASIC3.2□□□□□ -1.9
PCDHA8Q9Y5H6 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
PCDHA8Q9Y5H6 AC008264.2-201ENST00000610193 3731 ntBASIC3.19□□□□□ -1.9
PCDHA8Q9Y5H6 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
PCDHA8Q9Y5H6 AC009487.2-201ENST00000420969 6821 ntBASIC3.19□□□□□ -1.9
PCDHA8Q9Y5H6 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
PCDHA8Q9Y5H6 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PCDHA8Q9Y5H6 MAPK10-362ENST00000641864 4484 ntBASIC3.19□□□□□ -1.9
PCDHA8Q9Y5H6 Y_RNA.44-201ENST00000362676 108 ntBASIC3.19□□□□□ -1.9
PCDHA8Q9Y5H6 RNU1-72P-201ENST00000362976 153 ntBASIC3.19□□□□□ -1.9
PCDHA8Q9Y5H6 Y_RNA.101-201ENST00000363154 102 ntBASIC3.19□□□□□ -1.9
PCDHA8Q9Y5H6 Y_RNA.446-201ENST00000384178 104 ntBASIC3.19□□□□□ -1.9
PCDHA8Q9Y5H6 SNORA67.2-201ENST00000384300 149 ntBASIC3.19□□□□□ -1.9
PCDHA8Q9Y5H6 RNA5SP504-201ENST00000410676 117 ntBASIC3.19□□□□□ -1.9
PCDHA8Q9Y5H6 RPL19P1-201ENST00000411635 428 ntBASIC3.19□□□□□ -1.9
PCDHA8Q9Y5H6 AC009310.1-201ENST00000414414 451 ntBASIC3.19□□□□□ -1.9
PCDHA8Q9Y5H6 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDHA8Q9Y5H6 POLR2KP2-201ENST00000438155 177 ntBASIC3.19□□□□□ -1.9
PCDHA8Q9Y5H6 NDUFB4P10-201ENST00000452541 359 ntBASIC3.19□□□□□ -1.9
PCDHA8Q9Y5H6 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDHA8Q9Y5H6 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDHA8Q9Y5H6 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.19□□□□□ -1.9
PCDHA8Q9Y5H6 AC091932.3-201ENST00000624223 323 ntBASIC3.19□□□□□ -1.9
PCDHA8Q9Y5H6 AC090517.3-201ENST00000625170 141 ntBASIC3.19□□□□□ -1.9
PCDHA8Q9Y5H6 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDHA8Q9Y5H6 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDHA8Q9Y5H6 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.19□□□□□ -1.9
PCDHA8Q9Y5H6 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.18□□□□□ -1.9
PCDHA8Q9Y5H6 SNORA5B-201ENST00000363786 132 ntBASIC3.18□□□□□ -1.9
PCDHA8Q9Y5H6 RNU1-112P-201ENST00000364401 164 ntBASIC3.18□□□□□ -1.9
PCDHA8Q9Y5H6 RNU6-200P-201ENST00000364743 107 ntBASIC3.18□□□□□ -1.9
PCDHA8Q9Y5H6 Y_RNA.383-201ENST00000383855 97 ntBASIC3.18□□□□□ -1.9
PCDHA8Q9Y5H6 Y_RNA.510-201ENST00000384511 114 ntBASIC3.18□□□□□ -1.9
PCDHA8Q9Y5H6 MT-TR-201ENST00000387439 65 ntBASIC3.18□□□□□ -1.9
PCDHA8Q9Y5H6 MIR1294-201ENST00000408503 142 ntBASIC3.18□□□□□ -1.9
PCDHA8Q9Y5H6 RNU2-54P-201ENST00000410299 190 ntBASIC3.18□□□□□ -1.9
PCDHA8Q9Y5H6 RPL30P4-201ENST00000429309 333 ntBASIC3.18□□□□□ -1.9
PCDHA8Q9Y5H6 AC244505.4-201ENST00000434905 287 ntBASIC3.18□□□□□ -1.9
PCDHA8Q9Y5H6 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDHA8Q9Y5H6 SSXP5-201ENST00000443473 287 ntBASIC3.18□□□□□ -1.9
PCDHA8Q9Y5H6 AL139109.1-201ENST00000455491 297 ntBASIC3.18□□□□□ -1.9
PCDHA8Q9Y5H6 RNA5SP356-201ENST00000515972 94 ntBASIC3.18□□□□□ -1.9
PCDHA8Q9Y5H6 RNA5SP380-201ENST00000517190 98 ntBASIC3.18□□□□□ -1.9
PCDHA8Q9Y5H6 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.18□□□□□ -1.9
PCDHA8Q9Y5H6 AP002001.1-203ENST00000534002 267 ntBASIC3.18□□□□□ -1.9
PCDHA8Q9Y5H6 MIR4298-201ENST00000584380 73 ntBASIC3.18□□□□□ -1.9
PCDHA8Q9Y5H6 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDHA8Q9Y5H6 AL133393.1-201ENST00000603277 287 ntBASIC3.18□□□□□ -1.9
PCDHA8Q9Y5H6 AL713866.2-201ENST00000603579 219 ntBASIC3.18□□□□□ -1.9
PCDHA8Q9Y5H6 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHA8Q9Y5H6 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHA8Q9Y5H6 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHA8Q9Y5H6 SNORA25.1-201ENST00000362326 128 ntBASIC3.17□□□□□ -1.9
PCDHA8Q9Y5H6 Y_RNA.65-201ENST00000362846 100 ntBASIC3.17□□□□□ -1.9
PCDHA8Q9Y5H6 RNU2-14P-201ENST00000411053 191 ntBASIC3.17□□□□□ -1.9
PCDHA8Q9Y5H6 RNU6-1199P-201ENST00000411249 104 ntBASIC3.17□□□□□ -1.9
PCDHA8Q9Y5H6 AC009963.1-201ENST00000417265 157 ntBASIC3.17□□□□□ -1.9
PCDHA8Q9Y5H6 AC080013.2-201ENST00000460866 323 ntBASIC3.17□□□□□ -1.9
PCDHA8Q9Y5H6 UBE2DNL-203ENST00000474922 222 ntBASIC3.17□□□□□ -1.9
PCDHA8Q9Y5H6 RNU6-107P-201ENST00000516643 102 ntBASIC3.17□□□□□ -1.9
PCDHA8Q9Y5H6 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.17□□□□□ -1.9
PCDHA8Q9Y5H6 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.17□□□□□ -1.9
PCDHA8Q9Y5H6 ZNF861P-201ENST00000588126 639 ntBASIC3.17□□□□□ -1.9
PCDHA8Q9Y5H6 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.17□□□□□ -1.9
PCDHA8Q9Y5H6 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.17□□□□□ -1.9
PCDHA8Q9Y5H6 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.17□□□□□ -1.9
PCDHA8Q9Y5H6 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 170.1 ms