Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.96□□□□□ -1.94
PCDHGA2Q9Y5H1 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.96□□□□□ -1.94
PCDHGA2Q9Y5H1 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.96□□□□□ -1.94
PCDHGA2Q9Y5H1 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PCDHGA2Q9Y5H1 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.95□□□□□ -1.94
PCDHGA2Q9Y5H1 SNORA18.2-201ENST00000383865 132 ntBASIC2.95□□□□□ -1.94
PCDHGA2Q9Y5H1 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.95□□□□□ -1.94
PCDHGA2Q9Y5H1 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.95□□□□□ -1.94
PCDHGA2Q9Y5H1 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.95□□□□□ -1.94
PCDHGA2Q9Y5H1 IFNA11P-201ENST00000446352 526 ntBASIC2.95□□□□□ -1.94
PCDHGA2Q9Y5H1 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.95□□□□□ -1.94
PCDHGA2Q9Y5H1 RNU5F-4P-201ENST00000516581 114 ntBASIC2.95□□□□□ -1.94
PCDHGA2Q9Y5H1 AC022616.8-201ENST00000533569 253 ntBASIC2.95□□□□□ -1.94
PCDHGA2Q9Y5H1 MIR4300-201ENST00000581016 96 ntBASIC2.95□□□□□ -1.94
PCDHGA2Q9Y5H1 SNORD11B-201ENST00000607707 90 ntBASIC2.95□□□□□ -1.94
PCDHGA2Q9Y5H1 AL357075.2-201ENST00000614906 189 ntBASIC2.95□□□□□ -1.94
PCDHGA2Q9Y5H1 U4atac.1-201ENST00000618345 95 ntBASIC2.95□□□□□ -1.94
PCDHGA2Q9Y5H1 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.95□□□□□ -1.94
PCDHGA2Q9Y5H1 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.95□□□□□ -1.94
PCDHGA2Q9Y5H1 U6.104-201ENST00000637979 90 ntBASIC2.95□□□□□ -1.94
PCDHGA2Q9Y5H1 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
PCDHGA2Q9Y5H1 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PCDHGA2Q9Y5H1 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PCDHGA2Q9Y5H1 RNU6-472P-201ENST00000384299 107 ntBASIC2.94□□□□□ -1.94
PCDHGA2Q9Y5H1 MIR300-201ENST00000401138 83 ntBASIC2.94□□□□□ -1.94
PCDHGA2Q9Y5H1 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PCDHGA2Q9Y5H1 MIR1302-6-201ENST00000408466 90 ntBASIC2.94□□□□□ -1.94
PCDHGA2Q9Y5H1 AC004866.1-201ENST00000411748 78 ntBASIC2.94□□□□□ -1.94
PCDHGA2Q9Y5H1 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.94□□□□□ -1.94
PCDHGA2Q9Y5H1 ARL5AP4-201ENST00000430731 512 ntBASIC2.94□□□□□ -1.94
PCDHGA2Q9Y5H1 Y_RNA.668-201ENST00000516233 93 ntBASIC2.94□□□□□ -1.94
PCDHGA2Q9Y5H1 RNA5SP24-201ENST00000516478 95 ntBASIC2.94□□□□□ -1.94
PCDHGA2Q9Y5H1 RN7SKP40-201ENST00000517211 242 ntBASIC2.94□□□□□ -1.94
PCDHGA2Q9Y5H1 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.94□□□□□ -1.94
PCDHGA2Q9Y5H1 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.94□□□□□ -1.94
PCDHGA2Q9Y5H1 MIR376A1-201ENST00000616574 68 ntBASIC2.94□□□□□ -1.94
PCDHGA2Q9Y5H1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.94□□□□□ -1.94
PCDHGA2Q9Y5H1 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
PCDHGA2Q9Y5H1 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
PCDHGA2Q9Y5H1 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
PCDHGA2Q9Y5H1 RNU6-859P-201ENST00000362728 107 ntBASIC2.93□□□□□ -1.94
PCDHGA2Q9Y5H1 SNORD56.5-201ENST00000364281 72 ntBASIC2.93□□□□□ -1.94
PCDHGA2Q9Y5H1 SNORA9.2-201ENST00000365361 133 ntBASIC2.93□□□□□ -1.94
PCDHGA2Q9Y5H1 Y_RNA.376-201ENST00000365638 108 ntBASIC2.93□□□□□ -1.94
PCDHGA2Q9Y5H1 RNU5A-5P-201ENST00000411054 116 ntBASIC2.93□□□□□ -1.94
PCDHGA2Q9Y5H1 RNU2-32P-201ENST00000411193 191 ntBASIC2.93□□□□□ -1.94
PCDHGA2Q9Y5H1 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.93□□□□□ -1.94
PCDHGA2Q9Y5H1 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.93□□□□□ -1.94
PCDHGA2Q9Y5H1 UBBP3-201ENST00000445497 241 ntBASIC2.93□□□□□ -1.94
PCDHGA2Q9Y5H1 UQCRBP2-201ENST00000447827 297 ntBASIC2.93□□□□□ -1.94
PCDHGA2Q9Y5H1 AC074290.1-201ENST00000448883 135 ntBASIC2.93□□□□□ -1.94
PCDHGA2Q9Y5H1 AC008413.1-201ENST00000511864 177 ntBASIC2.93□□□□□ -1.94
PCDHGA2Q9Y5H1 RNU6-408P-201ENST00000515910 100 ntBASIC2.93□□□□□ -1.94
PCDHGA2Q9Y5H1 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.93□□□□□ -1.94
PCDHGA2Q9Y5H1 AK6P2-201ENST00000549020 471 ntBASIC2.93□□□□□ -1.94
PCDHGA2Q9Y5H1 RRN3P3-201ENST00000549207 578 ntBASIC2.93□□□□□ -1.94
PCDHGA2Q9Y5H1 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.93□□□□□ -1.94
PCDHGA2Q9Y5H1 MIR4423-201ENST00000580922 80 ntBASIC2.93□□□□□ -1.94
PCDHGA2Q9Y5H1 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.93□□□□□ -1.94
PCDHGA2Q9Y5H1 AC064859.1-201ENST00000624741 174 ntBASIC2.93□□□□□ -1.94
PCDHGA2Q9Y5H1 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.93□□□□□ -1.94
PCDHGA2Q9Y5H1 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PCDHGA2Q9Y5H1 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PCDHGA2Q9Y5H1 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PCDHGA2Q9Y5H1 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.92□□□□□ -1.94
PCDHGA2Q9Y5H1 AC073325.2-201ENST00000339545 159 ntBASIC2.92□□□□□ -1.94
PCDHGA2Q9Y5H1 RNU6-626P-201ENST00000363354 107 ntBASIC2.92□□□□□ -1.94
PCDHGA2Q9Y5H1 RNU6-961P-201ENST00000363893 105 ntBASIC2.92□□□□□ -1.94
PCDHGA2Q9Y5H1 RNU6-944P-201ENST00000364023 107 ntBASIC2.92□□□□□ -1.94
PCDHGA2Q9Y5H1 Y_RNA.230-201ENST00000364348 109 ntBASIC2.92□□□□□ -1.94
PCDHGA2Q9Y5H1 RNU6-234P-201ENST00000365229 104 ntBASIC2.92□□□□□ -1.94
PCDHGA2Q9Y5H1 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.92□□□□□ -1.94
PCDHGA2Q9Y5H1 Y_RNA.396-201ENST00000383949 103 ntBASIC2.92□□□□□ -1.94
PCDHGA2Q9Y5H1 Y_RNA.461-201ENST00000384263 103 ntBASIC2.92□□□□□ -1.94
PCDHGA2Q9Y5H1 RNU6-937P-201ENST00000384325 106 ntBASIC2.92□□□□□ -1.94
PCDHGA2Q9Y5H1 RNU6-1026P-201ENST00000384465 108 ntBASIC2.92□□□□□ -1.94
PCDHGA2Q9Y5H1 MIR9-1-201ENST00000385198 89 ntBASIC2.92□□□□□ -1.94
PCDHGA2Q9Y5H1 RNU2-52P-201ENST00000410680 190 ntBASIC2.92□□□□□ -1.94
PCDHGA2Q9Y5H1 ELOCP21-201ENST00000412558 336 ntBASIC2.92□□□□□ -1.94
PCDHGA2Q9Y5H1 RPL21P38-201ENST00000418090 167 ntBASIC2.92□□□□□ -1.94
PCDHGA2Q9Y5H1 AC244505.4-201ENST00000434905 287 ntBASIC2.92□□□□□ -1.94
PCDHGA2Q9Y5H1 AC005002.2-201ENST00000438228 269 ntBASIC2.92□□□□□ -1.94
PCDHGA2Q9Y5H1 SSXP5-201ENST00000443473 287 ntBASIC2.92□□□□□ -1.94
PCDHGA2Q9Y5H1 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.92□□□□□ -1.94
PCDHGA2Q9Y5H1 AC018448.1-201ENST00000552843 316 ntBASIC2.92□□□□□ -1.94
PCDHGA2Q9Y5H1 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.92□□□□□ -1.94
PCDHGA2Q9Y5H1 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.92□□□□□ -1.94
PCDHGA2Q9Y5H1 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.92□□□□□ -1.94
PCDHGA2Q9Y5H1 AC006006.1-201ENST00000603082 144 ntBASIC2.92□□□□□ -1.94
PCDHGA2Q9Y5H1 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.92□□□□□ -1.94
PCDHGA2Q9Y5H1 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.92□□□□□ -1.94
PCDHGA2Q9Y5H1 AP006437.1-201ENST00000641440 3685 ntBASIC2.92□□□□□ -1.94
PCDHGA2Q9Y5H1 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
PCDHGA2Q9Y5H1 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PCDHGA2Q9Y5H1 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
PCDHGA2Q9Y5H1 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.91□□□□□ -1.94
PCDHGA2Q9Y5H1 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
PCDHGA2Q9Y5H1 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PCDHGA2Q9Y5H1 RNU6-20P-201ENST00000384106 107 ntBASIC2.91□□□□□ -1.94
PCDHGA2Q9Y5H1 Y_RNA.518-201ENST00000384552 113 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms