Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.88□□□□□ -1.95
PCDHB1Q9Y5F3 AL449363.1-201ENST00000617815 186 ntBASIC2.88□□□□□ -1.95
PCDHB1Q9Y5F3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PCDHB1Q9Y5F3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.88□□□□□ -1.95
PCDHB1Q9Y5F3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.88□□□□□ -1.95
PCDHB1Q9Y5F3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.88□□□□□ -1.95
PCDHB1Q9Y5F3 RNU1-35P-201ENST00000362782 153 ntBASIC2.87□□□□□ -1.95
PCDHB1Q9Y5F3 SNORD27-201ENST00000363981 72 ntBASIC2.87□□□□□ -1.95
PCDHB1Q9Y5F3 RNU6-461P-201ENST00000364195 107 ntBASIC2.87□□□□□ -1.95
PCDHB1Q9Y5F3 SNORA20.1-201ENST00000364790 130 ntBASIC2.87□□□□□ -1.95
PCDHB1Q9Y5F3 Y_RNA.462-201ENST00000384268 102 ntBASIC2.87□□□□□ -1.95
PCDHB1Q9Y5F3 RNU6-102P-201ENST00000384485 104 ntBASIC2.87□□□□□ -1.95
PCDHB1Q9Y5F3 Y_RNA.518-201ENST00000384552 113 ntBASIC2.87□□□□□ -1.95
PCDHB1Q9Y5F3 SNORA12-201ENST00000391162 147 ntBASIC2.87□□□□□ -1.95
PCDHB1Q9Y5F3 FO393413.1-201ENST00000402892 195 ntBASIC2.87□□□□□ -1.95
PCDHB1Q9Y5F3 AL139095.1-201ENST00000404326 391 ntBASIC2.87□□□□□ -1.95
PCDHB1Q9Y5F3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.87□□□□□ -1.95
PCDHB1Q9Y5F3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.87□□□□□ -1.95
PCDHB1Q9Y5F3 AL109933.2-201ENST00000452651 260 ntBASIC2.87□□□□□ -1.95
PCDHB1Q9Y5F3 AC091179.3-201ENST00000474761 144 ntBASIC2.87□□□□□ -1.95
PCDHB1Q9Y5F3 SNORA40.9-201ENST00000515895 93 ntBASIC2.87□□□□□ -1.95
PCDHB1Q9Y5F3 RNA5SP385-201ENST00000515947 110 ntBASIC2.87□□□□□ -1.95
PCDHB1Q9Y5F3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.87□□□□□ -1.95
PCDHB1Q9Y5F3 DEFB108E-201ENST00000524692 240 ntBASIC2.87□□□□□ -1.95
PCDHB1Q9Y5F3 AC018630.3-201ENST00000542637 96 ntBASIC2.87□□□□□ -1.95
PCDHB1Q9Y5F3 AC233702.2-202ENST00000562547 291 ntBASIC2.87□□□□□ -1.95
PCDHB1Q9Y5F3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.87□□□□□ -1.95
PCDHB1Q9Y5F3 AL356280.1-201ENST00000603614 379 ntBASIC2.87□□□□□ -1.95
PCDHB1Q9Y5F3 MZT1P2-201ENST00000604387 248 ntBASIC2.87□□□□□ -1.95
PCDHB1Q9Y5F3 AC090115.4-201ENST00000609970 188 ntBASIC2.87□□□□□ -1.95
PCDHB1Q9Y5F3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.87□□□□□ -1.95
PCDHB1Q9Y5F3 MIR376A1-201ENST00000616574 68 ntBASIC2.87□□□□□ -1.95
PCDHB1Q9Y5F3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.87□□□□□ -1.95
PCDHB1Q9Y5F3 AC108206.1-201ENST00000570186 4159 ntBASIC2.87□□□□□ -1.95
PCDHB1Q9Y5F3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
PCDHB1Q9Y5F3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.87□□□□□ -1.95
PCDHB1Q9Y5F3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.87□□□□□ -1.95
PCDHB1Q9Y5F3 LINC02555-201ENST00000563933 1951 ntBASIC2.87□□□□□ -1.95
PCDHB1Q9Y5F3 SNORD63-201ENST00000384262 68 ntBASIC2.86□□□□□ -1.95
PCDHB1Q9Y5F3 RNU6-937P-201ENST00000384325 106 ntBASIC2.86□□□□□ -1.95
PCDHB1Q9Y5F3 Y_RNA.539-201ENST00000384635 107 ntBASIC2.86□□□□□ -1.95
PCDHB1Q9Y5F3 Y_RNA.552-201ENST00000384665 112 ntBASIC2.86□□□□□ -1.95
PCDHB1Q9Y5F3 MIR512-1-201ENST00000384913 84 ntBASIC2.86□□□□□ -1.95
PCDHB1Q9Y5F3 MIR627-201ENST00000384979 97 ntBASIC2.86□□□□□ -1.95
PCDHB1Q9Y5F3 MIR95-201ENST00000385072 81 ntBASIC2.86□□□□□ -1.95
PCDHB1Q9Y5F3 SNORD115-46-201ENST00000390982 71 ntBASIC2.86□□□□□ -1.95
PCDHB1Q9Y5F3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PCDHB1Q9Y5F3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.86□□□□□ -1.95
PCDHB1Q9Y5F3 AC090515.1-201ENST00000465295 476 ntBASIC2.86□□□□□ -1.95
PCDHB1Q9Y5F3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.86□□□□□ -1.95
PCDHB1Q9Y5F3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.86□□□□□ -1.95
PCDHB1Q9Y5F3 MIR3117-201ENST00000584034 78 ntBASIC2.86□□□□□ -1.95
PCDHB1Q9Y5F3 SNORD11B-201ENST00000607707 90 ntBASIC2.86□□□□□ -1.95
PCDHB1Q9Y5F3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
PCDHB1Q9Y5F3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
PCDHB1Q9Y5F3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.86□□□□□ -1.95
PCDHB1Q9Y5F3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.86□□□□□ -1.95
PCDHB1Q9Y5F3 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PCDHB1Q9Y5F3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PCDHB1Q9Y5F3 Y_RNA.498-201ENST00000384460 102 ntBASIC2.85□□□□□ -1.95
PCDHB1Q9Y5F3 Y_RNA.541-201ENST00000384640 113 ntBASIC2.85□□□□□ -1.95
PCDHB1Q9Y5F3 Y_RNA.602-201ENST00000410535 92 ntBASIC2.85□□□□□ -1.95
PCDHB1Q9Y5F3 RN7SKP123-201ENST00000410732 291 ntBASIC2.85□□□□□ -1.95
PCDHB1Q9Y5F3 RNU5A-5P-201ENST00000411054 116 ntBASIC2.85□□□□□ -1.95
PCDHB1Q9Y5F3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.85□□□□□ -1.95
PCDHB1Q9Y5F3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.85□□□□□ -1.95
PCDHB1Q9Y5F3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.85□□□□□ -1.95
PCDHB1Q9Y5F3 IFNA11P-201ENST00000446352 526 ntBASIC2.85□□□□□ -1.95
PCDHB1Q9Y5F3 UQCRBP2-201ENST00000447827 297 ntBASIC2.85□□□□□ -1.95
PCDHB1Q9Y5F3 RNU5F-4P-201ENST00000516581 114 ntBASIC2.85□□□□□ -1.95
PCDHB1Q9Y5F3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.85□□□□□ -1.95
PCDHB1Q9Y5F3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.85□□□□□ -1.95
PCDHB1Q9Y5F3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
PCDHB1Q9Y5F3 RNA5SP432-201ENST00000362480 116 ntBASIC2.84□□□□□ -1.95
PCDHB1Q9Y5F3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PCDHB1Q9Y5F3 AL033519.2-201ENST00000403958 392 ntBASIC2.84□□□□□ -1.95
PCDHB1Q9Y5F3 RNU2-14P-201ENST00000411053 191 ntBASIC2.84□□□□□ -1.95
PCDHB1Q9Y5F3 AL390729.2-201ENST00000416137 156 ntBASIC2.84□□□□□ -1.95
PCDHB1Q9Y5F3 Z96811.1-201ENST00000445880 108 ntBASIC2.84□□□□□ -1.95
PCDHB1Q9Y5F3 AL139109.1-201ENST00000455491 297 ntBASIC2.84□□□□□ -1.95
PCDHB1Q9Y5F3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.84□□□□□ -1.95
PCDHB1Q9Y5F3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.84□□□□□ -1.95
PCDHB1Q9Y5F3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.84□□□□□ -1.95
PCDHB1Q9Y5F3 SCARNA24.2-201ENST00000516968 130 ntBASIC2.84□□□□□ -1.95
PCDHB1Q9Y5F3 DEFB131C-201ENST00000528817 165 ntBASIC2.84□□□□□ -1.95
PCDHB1Q9Y5F3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.84□□□□□ -1.95
PCDHB1Q9Y5F3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.84□□□□□ -1.95
PCDHB1Q9Y5F3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
PCDHB1Q9Y5F3 MIR4435-1-201ENST00000582552 80 ntBASIC2.84□□□□□ -1.95
PCDHB1Q9Y5F3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
PCDHB1Q9Y5F3 AC141273.2-201ENST00000618989 130 ntBASIC2.84□□□□□ -1.95
PCDHB1Q9Y5F3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.84□□□□□ -1.96
PCDHB1Q9Y5F3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PCDHB1Q9Y5F3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PCDHB1Q9Y5F3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.83□□□□□ -1.96
PCDHB1Q9Y5F3 RNU6-626P-201ENST00000363354 107 ntBASIC2.83□□□□□ -1.96
PCDHB1Q9Y5F3 RNU6-944P-201ENST00000364023 107 ntBASIC2.83□□□□□ -1.96
PCDHB1Q9Y5F3 Y_RNA.230-201ENST00000364348 109 ntBASIC2.83□□□□□ -1.96
PCDHB1Q9Y5F3 RNU6-338P-201ENST00000383888 105 ntBASIC2.83□□□□□ -1.96
PCDHB1Q9Y5F3 RNU6-1310P-201ENST00000384153 107 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms