Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 HMGN2P35-201ENST00000412164 270 ntBASIC3.21□□□□□ -1.9
CTDP1Q9Y5B0 RPS26P42-201ENST00000413485 326 ntBASIC3.21□□□□□ -1.9
CTDP1Q9Y5B0 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.21□□□□□ -1.9
CTDP1Q9Y5B0 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.21□□□□□ -1.9
CTDP1Q9Y5B0 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.21□□□□□ -1.9
CTDP1Q9Y5B0 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.21□□□□□ -1.9
CTDP1Q9Y5B0 AC010095.1-201ENST00000443543 144 ntBASIC3.21□□□□□ -1.9
CTDP1Q9Y5B0 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.21□□□□□ -1.9
CTDP1Q9Y5B0 AL441985.1-201ENST00000457727 251 ntBASIC3.21□□□□□ -1.9
CTDP1Q9Y5B0 MRPS36P2-201ENST00000512569 299 ntBASIC3.21□□□□□ -1.9
CTDP1Q9Y5B0 SNORA40.9-201ENST00000515895 93 ntBASIC3.21□□□□□ -1.9
CTDP1Q9Y5B0 RNU2-31P-201ENST00000516954 155 ntBASIC3.21□□□□□ -1.9
CTDP1Q9Y5B0 SNORD19.2-201ENST00000516978 73 ntBASIC3.21□□□□□ -1.9
CTDP1Q9Y5B0 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.21□□□□□ -1.9
CTDP1Q9Y5B0 MIR4423-201ENST00000580922 80 ntBASIC3.21□□□□□ -1.9
CTDP1Q9Y5B0 MIR4298-201ENST00000584380 73 ntBASIC3.21□□□□□ -1.9
CTDP1Q9Y5B0 AC091152.3-201ENST00000604227 325 ntBASIC3.21□□□□□ -1.9
CTDP1Q9Y5B0 AC010999.1-201ENST00000611856 324 ntBASIC3.21□□□□□ -1.9
CTDP1Q9Y5B0 AC127459.3-201ENST00000624328 466 ntBASIC3.21□□□□□ -1.9
CTDP1Q9Y5B0 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.21□□□□□ -1.9
CTDP1Q9Y5B0 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CTDP1Q9Y5B0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.2□□□□□ -1.9
CTDP1Q9Y5B0 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CTDP1Q9Y5B0 RNU6-961P-201ENST00000363893 105 ntBASIC3.2□□□□□ -1.9
CTDP1Q9Y5B0 RNU4-56P-201ENST00000364700 142 ntBASIC3.2□□□□□ -1.9
CTDP1Q9Y5B0 RNU6-326P-201ENST00000365480 107 ntBASIC3.2□□□□□ -1.9
CTDP1Q9Y5B0 RNU6-748P-201ENST00000384648 107 ntBASIC3.2□□□□□ -1.9
CTDP1Q9Y5B0 Y_RNA.569-201ENST00000384749 103 ntBASIC3.2□□□□□ -1.9
CTDP1Q9Y5B0 MIR1298-201ENST00000408783 112 ntBASIC3.2□□□□□ -1.9
CTDP1Q9Y5B0 Y_RNA.595-201ENST00000410403 105 ntBASIC3.2□□□□□ -1.9
CTDP1Q9Y5B0 RNU2-49P-201ENST00000410666 184 ntBASIC3.2□□□□□ -1.9
CTDP1Q9Y5B0 AL390729.2-201ENST00000416137 156 ntBASIC3.2□□□□□ -1.9
CTDP1Q9Y5B0 AC096649.2-201ENST00000416186 393 ntBASIC3.2□□□□□ -1.9
CTDP1Q9Y5B0 AC138623.1-201ENST00000418060 216 ntBASIC3.2□□□□□ -1.9
CTDP1Q9Y5B0 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.2□□□□□ -1.9
CTDP1Q9Y5B0 AC112220.1-201ENST00000434628 355 ntBASIC3.2□□□□□ -1.9
CTDP1Q9Y5B0 MTND2P29-201ENST00000438595 412 ntBASIC3.2□□□□□ -1.9
CTDP1Q9Y5B0 AL445687.1-201ENST00000439946 251 ntBASIC3.2□□□□□ -1.9
CTDP1Q9Y5B0 AL138752.1-201ENST00000452964 351 ntBASIC3.2□□□□□ -1.9
CTDP1Q9Y5B0 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.2□□□□□ -1.9
CTDP1Q9Y5B0 SNORA25.14-201ENST00000516481 132 ntBASIC3.2□□□□□ -1.9
CTDP1Q9Y5B0 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.2□□□□□ -1.9
CTDP1Q9Y5B0 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.2□□□□□ -1.9
CTDP1Q9Y5B0 SNORD98-201ENST00000636377 67 ntBASIC3.2□□□□□ -1.9
CTDP1Q9Y5B0 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.2□□□□□ -1.9
CTDP1Q9Y5B0 ZNF204P-201ENST00000416749 2397 ntBASIC3.19□□□□□ -1.9
CTDP1Q9Y5B0 AC092593.1-201ENST00000515413 1815 ntBASIC3.19□□□□□ -1.9
CTDP1Q9Y5B0 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CTDP1Q9Y5B0 Y_RNA.44-201ENST00000362676 108 ntBASIC3.19□□□□□ -1.9
CTDP1Q9Y5B0 Y_RNA.230-201ENST00000364348 109 ntBASIC3.19□□□□□ -1.9
CTDP1Q9Y5B0 RNU1-112P-201ENST00000364401 164 ntBASIC3.19□□□□□ -1.9
CTDP1Q9Y5B0 Y_RNA.570-201ENST00000384750 101 ntBASIC3.19□□□□□ -1.9
CTDP1Q9Y5B0 MIR9-1-201ENST00000385198 89 ntBASIC3.19□□□□□ -1.9
CTDP1Q9Y5B0 AL139156.1-201ENST00000412785 841 ntBASIC3.19□□□□□ -1.9
CTDP1Q9Y5B0 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.19□□□□□ -1.9
CTDP1Q9Y5B0 RPL39P40-201ENST00000445481 146 ntBASIC3.19□□□□□ -1.9
CTDP1Q9Y5B0 AC108938.1-201ENST00000451204 136 ntBASIC3.19□□□□□ -1.9
CTDP1Q9Y5B0 AIG1P1-201ENST00000503376 148 ntBASIC3.19□□□□□ -1.9
CTDP1Q9Y5B0 MIR4643-201ENST00000577473 78 ntBASIC3.19□□□□□ -1.9
CTDP1Q9Y5B0 MIR3136-201ENST00000583498 78 ntBASIC3.19□□□□□ -1.9
CTDP1Q9Y5B0 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTDP1Q9Y5B0 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTDP1Q9Y5B0 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.19□□□□□ -1.9
CTDP1Q9Y5B0 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.18□□□□□ -1.9
CTDP1Q9Y5B0 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.18□□□□□ -1.9
CTDP1Q9Y5B0 SNORA25.1-201ENST00000362326 128 ntBASIC3.18□□□□□ -1.9
CTDP1Q9Y5B0 Y_RNA.83-201ENST00000363005 113 ntBASIC3.18□□□□□ -1.9
CTDP1Q9Y5B0 RNU6-1175P-201ENST00000365200 107 ntBASIC3.18□□□□□ -1.9
CTDP1Q9Y5B0 Y_RNA.555-201ENST00000384673 110 ntBASIC3.18□□□□□ -1.9
CTDP1Q9Y5B0 MIR208B-201ENST00000401172 77 ntBASIC3.18□□□□□ -1.9
CTDP1Q9Y5B0 RNA5SP21-201ENST00000410917 96 ntBASIC3.18□□□□□ -1.9
CTDP1Q9Y5B0 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.18□□□□□ -1.9
CTDP1Q9Y5B0 NDUFB4P10-201ENST00000452541 359 ntBASIC3.18□□□□□ -1.9
CTDP1Q9Y5B0 AC096725.1-201ENST00000514266 313 ntBASIC3.18□□□□□ -1.9
CTDP1Q9Y5B0 Y_RNA.683-201ENST00000516508 93 ntBASIC3.18□□□□□ -1.9
CTDP1Q9Y5B0 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.18□□□□□ -1.9
CTDP1Q9Y5B0 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.18□□□□□ -1.9
CTDP1Q9Y5B0 CYP4A27P-201ENST00000567218 190 ntBASIC3.18□□□□□ -1.9
CTDP1Q9Y5B0 MIR4435-1-201ENST00000582552 80 ntBASIC3.18□□□□□ -1.9
CTDP1Q9Y5B0 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.18□□□□□ -1.9
CTDP1Q9Y5B0 AC005176.2-201ENST00000596933 147 ntBASIC3.18□□□□□ -1.9
CTDP1Q9Y5B0 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.18□□□□□ -1.9
CTDP1Q9Y5B0 AC004792.1-201ENST00000614523 137 ntBASIC3.18□□□□□ -1.9
CTDP1Q9Y5B0 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
CTDP1Q9Y5B0 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.17□□□□□ -1.9
CTDP1Q9Y5B0 MIR26A1-201ENST00000362205 77 ntBASIC3.17□□□□□ -1.9
CTDP1Q9Y5B0 VTRNA1-1-201ENST00000363120 99 ntBASIC3.17□□□□□ -1.9
CTDP1Q9Y5B0 Y_RNA.199-201ENST00000364014 102 ntBASIC3.17□□□□□ -1.9
CTDP1Q9Y5B0 RNU6-514P-201ENST00000384208 107 ntBASIC3.17□□□□□ -1.9
CTDP1Q9Y5B0 MIR147B-201ENST00000390185 80 ntBASIC3.17□□□□□ -1.9
CTDP1Q9Y5B0 CYCSP48-201ENST00000417124 323 ntBASIC3.17□□□□□ -1.9
CTDP1Q9Y5B0 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.17□□□□□ -1.9
CTDP1Q9Y5B0 AC090616.3-201ENST00000582184 217 ntBASIC3.17□□□□□ -1.9
CTDP1Q9Y5B0 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.17□□□□□ -1.9
CTDP1Q9Y5B0 RPS15AP11-201ENST00000594193 385 ntBASIC3.17□□□□□ -1.9
CTDP1Q9Y5B0 AC008749.1-201ENST00000597650 306 ntBASIC3.17□□□□□ -1.9
CTDP1Q9Y5B0 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.17□□□□□ -1.9
CTDP1Q9Y5B0 RNU6-91P-201ENST00000607774 107 ntBASIC3.17□□□□□ -1.9
CTDP1Q9Y5B0 AL357075.2-201ENST00000614906 189 ntBASIC3.17□□□□□ -1.9
CTDP1Q9Y5B0 FTX_2.1-201ENST00000618816 94 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 509.5 ms