Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 AC127459.3-201ENST00000624328 466 ntBASIC3.35□□□□□ -1.87
R3HCC1Q9Y3T6 AC008873.1-201ENST00000625051 138 ntBASIC3.35□□□□□ -1.87
R3HCC1Q9Y3T6 MIR3674-201ENST00000636576 68 ntBASIC3.35□□□□□ -1.87
R3HCC1Q9Y3T6 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
R3HCC1Q9Y3T6 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
R3HCC1Q9Y3T6 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
R3HCC1Q9Y3T6 AL391987.6-201ENST00000305671 199 ntBASIC3.34□□□□□ -1.87
R3HCC1Q9Y3T6 RNU4-90P-201ENST00000362773 141 ntBASIC3.34□□□□□ -1.87
R3HCC1Q9Y3T6 RNU6-379P-201ENST00000363813 104 ntBASIC3.34□□□□□ -1.87
R3HCC1Q9Y3T6 RNU6-290P-201ENST00000365212 101 ntBASIC3.34□□□□□ -1.87
R3HCC1Q9Y3T6 Y_RNA.477-201ENST00000384352 108 ntBASIC3.34□□□□□ -1.87
R3HCC1Q9Y3T6 RNU6-21P-201ENST00000384710 107 ntBASIC3.34□□□□□ -1.87
R3HCC1Q9Y3T6 MIR548B-201ENST00000385247 97 ntBASIC3.34□□□□□ -1.87
R3HCC1Q9Y3T6 RNU2-32P-201ENST00000411193 191 ntBASIC3.34□□□□□ -1.87
R3HCC1Q9Y3T6 RPL19P1-201ENST00000411635 428 ntBASIC3.34□□□□□ -1.87
R3HCC1Q9Y3T6 CKS1BP2-201ENST00000497342 240 ntBASIC3.34□□□□□ -1.87
R3HCC1Q9Y3T6 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.34□□□□□ -1.87
R3HCC1Q9Y3T6 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.34□□□□□ -1.87
R3HCC1Q9Y3T6 AC109329.2-201ENST00000519658 482 ntBASIC3.34□□□□□ -1.87
R3HCC1Q9Y3T6 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.34□□□□□ -1.87
R3HCC1Q9Y3T6 AC107016.2-201ENST00000547968 190 ntBASIC3.34□□□□□ -1.87
R3HCC1Q9Y3T6 AL161756.2-201ENST00000604597 246 ntBASIC3.34□□□□□ -1.87
R3HCC1Q9Y3T6 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
R3HCC1Q9Y3T6 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
R3HCC1Q9Y3T6 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
R3HCC1Q9Y3T6 AL365361.1-201ENST00000566942 3481 ntBASIC3.34□□□□□ -1.88
R3HCC1Q9Y3T6 MIR22-201ENST00000362190 85 ntBASIC3.33□□□□□ -1.88
R3HCC1Q9Y3T6 MIR410-201ENST00000362222 80 ntBASIC3.33□□□□□ -1.88
R3HCC1Q9Y3T6 RNA5SP374-201ENST00000362939 125 ntBASIC3.33□□□□□ -1.88
R3HCC1Q9Y3T6 RNU6-454P-201ENST00000364292 107 ntBASIC3.33□□□□□ -1.88
R3HCC1Q9Y3T6 RNU6-1305P-201ENST00000364353 104 ntBASIC3.33□□□□□ -1.88
R3HCC1Q9Y3T6 RNA5SP125-201ENST00000364843 120 ntBASIC3.33□□□□□ -1.88
R3HCC1Q9Y3T6 SNORA72.2-201ENST00000365028 127 ntBASIC3.33□□□□□ -1.88
R3HCC1Q9Y3T6 Y_RNA.331-201ENST00000365267 102 ntBASIC3.33□□□□□ -1.88
R3HCC1Q9Y3T6 RNU6-1264P-201ENST00000383891 107 ntBASIC3.33□□□□□ -1.88
R3HCC1Q9Y3T6 MIR181A2-201ENST00000384863 110 ntBASIC3.33□□□□□ -1.88
R3HCC1Q9Y3T6 MIR483-201ENST00000385070 76 ntBASIC3.33□□□□□ -1.88
R3HCC1Q9Y3T6 RNU6-1199P-201ENST00000411249 104 ntBASIC3.33□□□□□ -1.88
R3HCC1Q9Y3T6 AC003685.2-201ENST00000422795 395 ntBASIC3.33□□□□□ -1.88
R3HCC1Q9Y3T6 AC139712.2-201ENST00000424302 339 ntBASIC3.33□□□□□ -1.88
R3HCC1Q9Y3T6 RPL39P38-201ENST00000467018 153 ntBASIC3.33□□□□□ -1.88
R3HCC1Q9Y3T6 RPS29P2-201ENST00000479278 136 ntBASIC3.33□□□□□ -1.88
R3HCC1Q9Y3T6 SCARNA24.2-201ENST00000516968 130 ntBASIC3.33□□□□□ -1.88
R3HCC1Q9Y3T6 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.33□□□□□ -1.88
R3HCC1Q9Y3T6 AC010900.2-201ENST00000604508 210 ntBASIC3.33□□□□□ -1.88
R3HCC1Q9Y3T6 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.33□□□□□ -1.88
R3HCC1Q9Y3T6 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
R3HCC1Q9Y3T6 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
R3HCC1Q9Y3T6 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
R3HCC1Q9Y3T6 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
R3HCC1Q9Y3T6 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
R3HCC1Q9Y3T6 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.32□□□□□ -1.88
R3HCC1Q9Y3T6 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.32□□□□□ -1.88
R3HCC1Q9Y3T6 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
R3HCC1Q9Y3T6 MIR335-201ENST00000362173 94 ntBASIC3.32□□□□□ -1.88
R3HCC1Q9Y3T6 RNU6-546P-201ENST00000383991 107 ntBASIC3.32□□□□□ -1.88
R3HCC1Q9Y3T6 Y_RNA.446-201ENST00000384178 104 ntBASIC3.32□□□□□ -1.88
R3HCC1Q9Y3T6 MIR627-201ENST00000384979 97 ntBASIC3.32□□□□□ -1.88
R3HCC1Q9Y3T6 RNA5SP475-201ENST00000410568 110 ntBASIC3.32□□□□□ -1.88
R3HCC1Q9Y3T6 Z96811.1-201ENST00000445880 108 ntBASIC3.32□□□□□ -1.88
R3HCC1Q9Y3T6 EEF1B2P7-201ENST00000451177 676 ntBASIC3.32□□□□□ -1.88
R3HCC1Q9Y3T6 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.32□□□□□ -1.88
R3HCC1Q9Y3T6 CYP2C59P-201ENST00000457790 269 ntBASIC3.32□□□□□ -1.88
R3HCC1Q9Y3T6 HMGN2P9-201ENST00000476875 229 ntBASIC3.32□□□□□ -1.88
R3HCC1Q9Y3T6 AC004486.1-201ENST00000546846 233 ntBASIC3.32□□□□□ -1.88
R3HCC1Q9Y3T6 AC008749.1-201ENST00000597650 306 ntBASIC3.32□□□□□ -1.88
R3HCC1Q9Y3T6 AC090425.1-201ENST00000610007 140 ntBASIC3.32□□□□□ -1.88
R3HCC1Q9Y3T6 IGHVIII-44-202ENST00000636235 289 ntBASIC3.32□□□□□ -1.88
R3HCC1Q9Y3T6 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
R3HCC1Q9Y3T6 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.31□□□□□ -1.88
R3HCC1Q9Y3T6 Z82209.1-201ENST00000422141 2135 ntBASIC3.31□□□□□ -1.88
R3HCC1Q9Y3T6 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.31□□□□□ -1.88
R3HCC1Q9Y3T6 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
R3HCC1Q9Y3T6 Y_RNA.60-201ENST00000362831 98 ntBASIC3.31□□□□□ -1.88
R3HCC1Q9Y3T6 Y_RNA.476-201ENST00000384347 108 ntBASIC3.31□□□□□ -1.88
R3HCC1Q9Y3T6 MIR586-201ENST00000385035 97 ntBASIC3.31□□□□□ -1.88
R3HCC1Q9Y3T6 SNORD67-201ENST00000390833 111 ntBASIC3.31□□□□□ -1.88
R3HCC1Q9Y3T6 RN7SKP220-201ENST00000410611 288 ntBASIC3.31□□□□□ -1.88
R3HCC1Q9Y3T6 RNU2-48P-201ENST00000410694 191 ntBASIC3.31□□□□□ -1.88
R3HCC1Q9Y3T6 AL390729.2-201ENST00000416137 156 ntBASIC3.31□□□□□ -1.88
R3HCC1Q9Y3T6 AL445687.1-201ENST00000439946 251 ntBASIC3.31□□□□□ -1.88
R3HCC1Q9Y3T6 RNA5SP341-201ENST00000516261 117 ntBASIC3.31□□□□□ -1.88
R3HCC1Q9Y3T6 SNORA48.11-201ENST00000517015 89 ntBASIC3.31□□□□□ -1.88
R3HCC1Q9Y3T6 AC022616.8-201ENST00000533569 253 ntBASIC3.31□□□□□ -1.88
R3HCC1Q9Y3T6 MIR3616-201ENST00000584070 92 ntBASIC3.31□□□□□ -1.88
R3HCC1Q9Y3T6 AL355297.2-201ENST00000604792 129 ntBASIC3.31□□□□□ -1.88
R3HCC1Q9Y3T6 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.31□□□□□ -1.88
R3HCC1Q9Y3T6 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
R3HCC1Q9Y3T6 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.3□□□□□ -1.88
R3HCC1Q9Y3T6 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
R3HCC1Q9Y3T6 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
R3HCC1Q9Y3T6 U3.8-201ENST00000363675 217 ntBASIC3.3□□□□□ -1.88
R3HCC1Q9Y3T6 RNA5SP240-201ENST00000365355 128 ntBASIC3.3□□□□□ -1.88
R3HCC1Q9Y3T6 RNU6-1310P-201ENST00000384153 107 ntBASIC3.3□□□□□ -1.88
R3HCC1Q9Y3T6 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
R3HCC1Q9Y3T6 MIR1283-1-201ENST00000408494 87 ntBASIC3.3□□□□□ -1.88
R3HCC1Q9Y3T6 AC104332.2-201ENST00000429959 156 ntBASIC3.3□□□□□ -1.88
R3HCC1Q9Y3T6 MTND4LP30-201ENST00000454092 297 ntBASIC3.3□□□□□ -1.88
R3HCC1Q9Y3T6 RPS29P26-201ENST00000477483 171 ntBASIC3.3□□□□□ -1.88
R3HCC1Q9Y3T6 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms