Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 TIMM9P3-201ENST00000428659 274 ntBASIC0.76□□□□□ -2.29
RHBDD3Q9Y3P4 MTND3P9-201ENST00000429526 346 ntBASIC0.76□□□□□ -2.29
RHBDD3Q9Y3P4 AL606517.2-201ENST00000442855 241 ntBASIC0.76□□□□□ -2.29
RHBDD3Q9Y3P4 RNU7-63P-201ENST00000459054 62 ntBASIC0.76□□□□□ -2.29
RHBDD3Q9Y3P4 SNORD79.1-201ENST00000516069 84 ntBASIC0.76□□□□□ -2.29
RHBDD3Q9Y3P4 RNA5SP168-201ENST00000516642 112 ntBASIC0.76□□□□□ -2.29
RHBDD3Q9Y3P4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.76□□□□□ -2.29
RHBDD3Q9Y3P4 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.76□□□□□ -2.29
RHBDD3Q9Y3P4 MRPS36P4-201ENST00000534436 298 ntBASIC0.76□□□□□ -2.29
RHBDD3Q9Y3P4 AC007834.2-201ENST00000536310 343 ntBASIC0.76□□□□□ -2.29
RHBDD3Q9Y3P4 AL137100.2-201ENST00000555786 315 ntBASIC0.76□□□□□ -2.29
RHBDD3Q9Y3P4 MIR5695-201ENST00000579717 85 ntBASIC0.76□□□□□ -2.29
RHBDD3Q9Y3P4 AC008088.1-201ENST00000580993 280 ntBASIC0.76□□□□□ -2.29
RHBDD3Q9Y3P4 AL357312.1-201ENST00000603879 298 ntBASIC0.76□□□□□ -2.29
RHBDD3Q9Y3P4 FAM71BP1-201ENST00000604431 523 ntBASIC0.76□□□□□ -2.29
RHBDD3Q9Y3P4 AC016727.1-205ENST00000605437 569 ntBASIC0.76□□□□□ -2.29
RHBDD3Q9Y3P4 AC139792.3-201ENST00000623525 224 ntBASIC0.76□□□□□ -2.29
RHBDD3Q9Y3P4 SCARNA4-201ENST00000629045 128 ntBASIC0.76□□□□□ -2.29
RHBDD3Q9Y3P4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
RHBDD3Q9Y3P4 RNU6-82P-201ENST00000363970 107 ntBASIC0.75□□□□□ -2.29
RHBDD3Q9Y3P4 RNU6-1080P-201ENST00000383982 107 ntBASIC0.75□□□□□ -2.29
RHBDD3Q9Y3P4 RNU6-245P-201ENST00000384020 107 ntBASIC0.75□□□□□ -2.29
RHBDD3Q9Y3P4 SNORA80D-201ENST00000384488 135 ntBASIC0.75□□□□□ -2.29
RHBDD3Q9Y3P4 MIR608-201ENST00000384820 100 ntBASIC0.75□□□□□ -2.29
RHBDD3Q9Y3P4 MIR532-201ENST00000385025 91 ntBASIC0.75□□□□□ -2.29
RHBDD3Q9Y3P4 MIR653-201ENST00000385279 96 ntBASIC0.75□□□□□ -2.29
RHBDD3Q9Y3P4 AC004866.1-201ENST00000411748 78 ntBASIC0.75□□□□□ -2.29
RHBDD3Q9Y3P4 AC002429.1-201ENST00000437672 148 ntBASIC0.75□□□□□ -2.29
RHBDD3Q9Y3P4 NDUFB4P10-201ENST00000452541 359 ntBASIC0.75□□□□□ -2.29
RHBDD3Q9Y3P4 SNRPGP9-201ENST00000456025 225 ntBASIC0.75□□□□□ -2.29
RHBDD3Q9Y3P4 RPL39P5-202ENST00000512505 151 ntBASIC0.75□□□□□ -2.29
RHBDD3Q9Y3P4 ACA64.5-201ENST00000516207 127 ntBASIC0.75□□□□□ -2.29
RHBDD3Q9Y3P4 RNA5SP54-201ENST00000516951 92 ntBASIC0.75□□□□□ -2.29
RHBDD3Q9Y3P4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.75□□□□□ -2.29
RHBDD3Q9Y3P4 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.75□□□□□ -2.29
RHBDD3Q9Y3P4 MTATP6P3-201ENST00000581686 676 ntBASIC0.75□□□□□ -2.29
RHBDD3Q9Y3P4 AC022432.1-201ENST00000595739 310 ntBASIC0.75□□□□□ -2.29
RHBDD3Q9Y3P4 AC068790.6-201ENST00000602558 258 ntBASIC0.75□□□□□ -2.29
RHBDD3Q9Y3P4 AC013244.2-201ENST00000603396 103 ntBASIC0.75□□□□□ -2.29
RHBDD3Q9Y3P4 HULC.1-201ENST00000612720 240 ntBASIC0.75□□□□□ -2.29
RHBDD3Q9Y3P4 OR4G1P-203ENST00000641984 1631 ntBASIC0.75□□□□□ -2.29
RHBDD3Q9Y3P4 Y_RNA.201-201ENST00000364052 96 ntBASIC0.74□□□□□ -2.29
RHBDD3Q9Y3P4 RNU6-996P-201ENST00000365438 107 ntBASIC0.74□□□□□ -2.29
RHBDD3Q9Y3P4 RNA5SP219-201ENST00000390940 113 ntBASIC0.74□□□□□ -2.29
RHBDD3Q9Y3P4 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.74□□□□□ -2.29
RHBDD3Q9Y3P4 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.74□□□□□ -2.29
RHBDD3Q9Y3P4 MTCO2P11-201ENST00000431069 680 ntBASIC0.74□□□□□ -2.29
RHBDD3Q9Y3P4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.74□□□□□ -2.29
RHBDD3Q9Y3P4 AC048334.1-201ENST00000477975 159 ntBASIC0.74□□□□□ -2.29
RHBDD3Q9Y3P4 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.74□□□□□ -2.29
RHBDD3Q9Y3P4 AC103851.1-201ENST00000506833 274 ntBASIC0.74□□□□□ -2.29
RHBDD3Q9Y3P4 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC0.74□□□□□ -2.29
RHBDD3Q9Y3P4 PSMC1P5-201ENST00000512850 177 ntBASIC0.74□□□□□ -2.29
RHBDD3Q9Y3P4 RNU6-1053P-201ENST00000515930 101 ntBASIC0.74□□□□□ -2.29
RHBDD3Q9Y3P4 RNU6-322P-201ENST00000516010 103 ntBASIC0.74□□□□□ -2.29
RHBDD3Q9Y3P4 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.74□□□□□ -2.29
RHBDD3Q9Y3P4 RNU6-759P-201ENST00000516740 103 ntBASIC0.74□□□□□ -2.29
RHBDD3Q9Y3P4 RNU6-922P-201ENST00000516753 99 ntBASIC0.74□□□□□ -2.29
RHBDD3Q9Y3P4 AC136628.3-201ENST00000521868 290 ntBASIC0.74□□□□□ -2.29
RHBDD3Q9Y3P4 AL121579.1-201ENST00000555129 305 ntBASIC0.74□□□□□ -2.29
RHBDD3Q9Y3P4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.74□□□□□ -2.29
RHBDD3Q9Y3P4 MIR3915-201ENST00000578518 97 ntBASIC0.74□□□□□ -2.29
RHBDD3Q9Y3P4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.74□□□□□ -2.29
RHBDD3Q9Y3P4 BNIP3P10-201ENST00000605360 577 ntBASIC0.74□□□□□ -2.29
RHBDD3Q9Y3P4 SNORA28-201ENST00000606769 126 ntBASIC0.74□□□□□ -2.29
RHBDD3Q9Y3P4 SNORD11B-201ENST00000607707 90 ntBASIC0.74□□□□□ -2.29
RHBDD3Q9Y3P4 AL360219.1-201ENST00000610230 366 ntBASIC0.74□□□□□ -2.29
RHBDD3Q9Y3P4 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.74□□□□□ -2.29
RHBDD3Q9Y3P4 Y_RNA.123-201ENST00000363338 102 ntBASIC0.73□□□□□ -2.29
RHBDD3Q9Y3P4 MIR146A-201ENST00000385201 99 ntBASIC0.73□□□□□ -2.29
RHBDD3Q9Y3P4 RNU11-5P-201ENST00000391216 129 ntBASIC0.73□□□□□ -2.29
RHBDD3Q9Y3P4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.73□□□□□ -2.29
RHBDD3Q9Y3P4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.73□□□□□ -2.29
RHBDD3Q9Y3P4 MTCO2P18-201ENST00000457151 658 ntBASIC0.73□□□□□ -2.29
RHBDD3Q9Y3P4 RNU6-351P-201ENST00000516097 100 ntBASIC0.73□□□□□ -2.29
RHBDD3Q9Y3P4 RNU6-189P-201ENST00000516120 101 ntBASIC0.73□□□□□ -2.29
RHBDD3Q9Y3P4 RNU7-99P-201ENST00000516271 62 ntBASIC0.73□□□□□ -2.29
RHBDD3Q9Y3P4 RNU6-197P-201ENST00000516680 100 ntBASIC0.73□□□□□ -2.29
RHBDD3Q9Y3P4 AC090142.3-201ENST00000519012 385 ntBASIC0.73□□□□□ -2.29
RHBDD3Q9Y3P4 AL590705.4-201ENST00000532209 134 ntBASIC0.73□□□□□ -2.29
RHBDD3Q9Y3P4 MIR4698-201ENST00000577795 80 ntBASIC0.73□□□□□ -2.29
RHBDD3Q9Y3P4 MIR5583-1-201ENST00000580941 59 ntBASIC0.73□□□□□ -2.29
RHBDD3Q9Y3P4 AC004223.2-201ENST00000590309 544 ntBASIC0.73□□□□□ -2.29
RHBDD3Q9Y3P4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.73□□□□□ -2.29
RHBDD3Q9Y3P4 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
RHBDD3Q9Y3P4 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
RHBDD3Q9Y3P4 RNU6-199P-201ENST00000362954 107 ntBASIC0.72□□□□□ -2.29
RHBDD3Q9Y3P4 SNORD114-2-201ENST00000363953 78 ntBASIC0.72□□□□□ -2.29
RHBDD3Q9Y3P4 RNU6-1329P-201ENST00000365664 107 ntBASIC0.72□□□□□ -2.29
RHBDD3Q9Y3P4 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.72□□□□□ -2.29
RHBDD3Q9Y3P4 RNU5A-6P-201ENST00000384136 116 ntBASIC0.72□□□□□ -2.29
RHBDD3Q9Y3P4 MT-TH-201ENST00000387441 69 ntBASIC0.72□□□□□ -2.29
RHBDD3Q9Y3P4 AL049545.1-201ENST00000401856 572 ntBASIC0.72□□□□□ -2.29
RHBDD3Q9Y3P4 AC006461.1-201ENST00000412637 326 ntBASIC0.72□□□□□ -2.29
RHBDD3Q9Y3P4 AC114482.1-201ENST00000418010 247 ntBASIC0.72□□□□□ -2.29
RHBDD3Q9Y3P4 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.72□□□□□ -2.29
RHBDD3Q9Y3P4 AC073415.1-201ENST00000449240 153 ntBASIC0.72□□□□□ -2.29
RHBDD3Q9Y3P4 MTND1P27-201ENST00000451117 902 ntBASIC0.72□□□□□ -2.29
RHBDD3Q9Y3P4 RPL39P39-201ENST00000455840 151 ntBASIC0.72□□□□□ -2.29
RHBDD3Q9Y3P4 SNORD124-201ENST00000459577 104 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 185.3 ms