Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 RNU6-275P-201ENST00000364910 107 ntBASIC3.12□□□□□ -1.91
SF3B6Q9Y3B4 U8.7-201ENST00000364940 136 ntBASIC3.12□□□□□ -1.91
SF3B6Q9Y3B4 RNU6-407P-201ENST00000365280 104 ntBASIC3.12□□□□□ -1.91
SF3B6Q9Y3B4 Y_RNA.357-201ENST00000365487 109 ntBASIC3.12□□□□□ -1.91
SF3B6Q9Y3B4 SNORD116-13-201ENST00000384408 92 ntBASIC3.12□□□□□ -1.91
SF3B6Q9Y3B4 CYCSP19-201ENST00000411715 316 ntBASIC3.12□□□□□ -1.91
SF3B6Q9Y3B4 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.12□□□□□ -1.91
SF3B6Q9Y3B4 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.12□□□□□ -1.91
SF3B6Q9Y3B4 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.12□□□□□ -1.91
SF3B6Q9Y3B4 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.12□□□□□ -1.91
SF3B6Q9Y3B4 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.12□□□□□ -1.91
SF3B6Q9Y3B4 HMGN1P18-201ENST00000457642 277 ntBASIC3.12□□□□□ -1.91
SF3B6Q9Y3B4 SCARNA8-201ENST00000515924 131 ntBASIC3.12□□□□□ -1.91
SF3B6Q9Y3B4 SNORA70.19-201ENST00000516717 90 ntBASIC3.12□□□□□ -1.91
SF3B6Q9Y3B4 RNU6-453P-201ENST00000516819 85 ntBASIC3.12□□□□□ -1.91
SF3B6Q9Y3B4 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.12□□□□□ -1.91
SF3B6Q9Y3B4 AC023632.4-201ENST00000517783 191 ntBASIC3.12□□□□□ -1.91
SF3B6Q9Y3B4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.12□□□□□ -1.91
SF3B6Q9Y3B4 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.12□□□□□ -1.91
SF3B6Q9Y3B4 MIR4744-201ENST00000581563 82 ntBASIC3.12□□□□□ -1.91
SF3B6Q9Y3B4 AC013412.1-201ENST00000610687 192 ntBASIC3.12□□□□□ -1.91
SF3B6Q9Y3B4 AC068647.2-201ENST00000637380 353 ntBASIC3.12□□□□□ -1.91
SF3B6Q9Y3B4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.12□□□□□ -1.91
SF3B6Q9Y3B4 AC080128.1-201ENST00000474389 1917 ntBASIC3.12□□□□□ -1.91
SF3B6Q9Y3B4 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.12□□□□□ -1.91
SF3B6Q9Y3B4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
SF3B6Q9Y3B4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SF3B6Q9Y3B4 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SF3B6Q9Y3B4 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.11□□□□□ -1.91
SF3B6Q9Y3B4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SF3B6Q9Y3B4 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SF3B6Q9Y3B4 RNU6-743P-201ENST00000364151 106 ntBASIC3.11□□□□□ -1.91
SF3B6Q9Y3B4 RNU4-84P-201ENST00000364200 139 ntBASIC3.11□□□□□ -1.91
SF3B6Q9Y3B4 SNORA68.1-201ENST00000364537 132 ntBASIC3.11□□□□□ -1.91
SF3B6Q9Y3B4 RNU6-438P-201ENST00000365561 103 ntBASIC3.11□□□□□ -1.91
SF3B6Q9Y3B4 RNU6-449P-201ENST00000383914 107 ntBASIC3.11□□□□□ -1.91
SF3B6Q9Y3B4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SF3B6Q9Y3B4 RNU6-578P-201ENST00000390980 103 ntBASIC3.11□□□□□ -1.91
SF3B6Q9Y3B4 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.11□□□□□ -1.91
SF3B6Q9Y3B4 RNU2-32P-201ENST00000411193 191 ntBASIC3.11□□□□□ -1.91
SF3B6Q9Y3B4 HMGN2P18-201ENST00000450680 270 ntBASIC3.11□□□□□ -1.91
SF3B6Q9Y3B4 AC245047.8-201ENST00000456455 284 ntBASIC3.11□□□□□ -1.91
SF3B6Q9Y3B4 AC016925.1-201ENST00000458303 298 ntBASIC3.11□□□□□ -1.91
SF3B6Q9Y3B4 AC008155.2-201ENST00000464337 397 ntBASIC3.11□□□□□ -1.91
SF3B6Q9Y3B4 AC117454.1-201ENST00000491120 168 ntBASIC3.11□□□□□ -1.91
SF3B6Q9Y3B4 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.11□□□□□ -1.91
SF3B6Q9Y3B4 SNORA64.4-201ENST00000516632 81 ntBASIC3.11□□□□□ -1.91
SF3B6Q9Y3B4 AC068657.1-201ENST00000520807 306 ntBASIC3.11□□□□□ -1.91
SF3B6Q9Y3B4 MIR5047-201ENST00000579212 100 ntBASIC3.11□□□□□ -1.91
SF3B6Q9Y3B4 AC006130.2-201ENST00000586202 326 ntBASIC3.11□□□□□ -1.91
SF3B6Q9Y3B4 AL161912.2-201ENST00000565707 3007 ntBASIC3.11□□□□□ -1.91
SF3B6Q9Y3B4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SF3B6Q9Y3B4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SF3B6Q9Y3B4 SNORD56.3-201ENST00000363507 71 ntBASIC3.1□□□□□ -1.91
SF3B6Q9Y3B4 SNORA62.3-201ENST00000365110 153 ntBASIC3.1□□□□□ -1.91
SF3B6Q9Y3B4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SF3B6Q9Y3B4 FO393413.1-201ENST00000402892 195 ntBASIC3.1□□□□□ -1.91
SF3B6Q9Y3B4 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.1□□□□□ -1.91
SF3B6Q9Y3B4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.1□□□□□ -1.91
SF3B6Q9Y3B4 AC010598.1-201ENST00000510378 103 ntBASIC3.1□□□□□ -1.91
SF3B6Q9Y3B4 PHBP14-201ENST00000512887 367 ntBASIC3.1□□□□□ -1.91
SF3B6Q9Y3B4 RNU6-1007P-201ENST00000516586 107 ntBASIC3.1□□□□□ -1.91
SF3B6Q9Y3B4 RNU1-45P-201ENST00000517191 141 ntBASIC3.1□□□□□ -1.91
SF3B6Q9Y3B4 AC096577.2-201ENST00000611455 153 ntBASIC3.1□□□□□ -1.91
SF3B6Q9Y3B4 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.1□□□□□ -1.91
SF3B6Q9Y3B4 MTND1P7-201ENST00000632801 297 ntBASIC3.1□□□□□ -1.91
SF3B6Q9Y3B4 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.1□□□□□ -1.91
SF3B6Q9Y3B4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.1□□□□□ -1.91
SF3B6Q9Y3B4 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
SF3B6Q9Y3B4 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SF3B6Q9Y3B4 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.09□□□□□ -1.91
SF3B6Q9Y3B4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SF3B6Q9Y3B4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
SF3B6Q9Y3B4 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SF3B6Q9Y3B4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SF3B6Q9Y3B4 AL356292.1-201ENST00000283110 373 ntBASIC3.09□□□□□ -1.91
SF3B6Q9Y3B4 MIR148B-201ENST00000362252 99 ntBASIC3.09□□□□□ -1.91
SF3B6Q9Y3B4 SNORD114-7-201ENST00000362520 77 ntBASIC3.09□□□□□ -1.91
SF3B6Q9Y3B4 RNA5SP383-201ENST00000362934 120 ntBASIC3.09□□□□□ -1.91
SF3B6Q9Y3B4 RNU6-103P-201ENST00000363686 107 ntBASIC3.09□□□□□ -1.91
SF3B6Q9Y3B4 RNU6-818P-201ENST00000364837 108 ntBASIC3.09□□□□□ -1.91
SF3B6Q9Y3B4 RNU6-546P-201ENST00000383991 107 ntBASIC3.09□□□□□ -1.91
SF3B6Q9Y3B4 MIR518C-201ENST00000384822 101 ntBASIC3.09□□□□□ -1.91
SF3B6Q9Y3B4 MIR200C-201ENST00000384980 68 ntBASIC3.09□□□□□ -1.91
SF3B6Q9Y3B4 MIR134-201ENST00000385258 73 ntBASIC3.09□□□□□ -1.91
SF3B6Q9Y3B4 RNU6-383P-201ENST00000410864 94 ntBASIC3.09□□□□□ -1.91
SF3B6Q9Y3B4 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.09□□□□□ -1.91
SF3B6Q9Y3B4 RPS26P55-201ENST00000471178 356 ntBASIC3.09□□□□□ -1.91
SF3B6Q9Y3B4 AC010409.1-201ENST00000487382 476 ntBASIC3.09□□□□□ -1.91
SF3B6Q9Y3B4 AC023141.11-201ENST00000508864 202 ntBASIC3.09□□□□□ -1.91
SF3B6Q9Y3B4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.09□□□□□ -1.91
SF3B6Q9Y3B4 RNU6-948P-201ENST00000516374 107 ntBASIC3.09□□□□□ -1.91
SF3B6Q9Y3B4 RNU6-63P-201ENST00000516690 95 ntBASIC3.09□□□□□ -1.91
SF3B6Q9Y3B4 PRELID2P1-201ENST00000552837 301 ntBASIC3.09□□□□□ -1.91
SF3B6Q9Y3B4 AC034105.4-201ENST00000568304 277 ntBASIC3.09□□□□□ -1.91
SF3B6Q9Y3B4 AC090616.3-201ENST00000582184 217 ntBASIC3.09□□□□□ -1.91
SF3B6Q9Y3B4 MIR5187-201ENST00000583479 76 ntBASIC3.09□□□□□ -1.91
SF3B6Q9Y3B4 MIR548AY-201ENST00000617669 107 ntBASIC3.09□□□□□ -1.91
SF3B6Q9Y3B4 MIR5739-201ENST00000619803 80 ntBASIC3.09□□□□□ -1.91
SF3B6Q9Y3B4 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.09□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms