Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
NCKAP1Q9Y2A7 Y_RNA.594-201ENST00000410373 140 ntBASIC1.81□□□□□ -2.12
NCKAP1Q9Y2A7 RNU4-14P-201ENST00000410858 122 ntBASIC1.81□□□□□ -2.12
NCKAP1Q9Y2A7 AC139712.2-201ENST00000424302 339 ntBASIC1.81□□□□□ -2.12
NCKAP1Q9Y2A7 AC009237.7-201ENST00000447357 229 ntBASIC1.81□□□□□ -2.12
NCKAP1Q9Y2A7 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.81□□□□□ -2.12
NCKAP1Q9Y2A7 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.81□□□□□ -2.12
NCKAP1Q9Y2A7 HMGN1P12-201ENST00000499125 195 ntBASIC1.81□□□□□ -2.12
NCKAP1Q9Y2A7 AC103851.1-201ENST00000506833 274 ntBASIC1.81□□□□□ -2.12
NCKAP1Q9Y2A7 PRDX4P1-201ENST00000507189 574 ntBASIC1.81□□□□□ -2.12
NCKAP1Q9Y2A7 RNU6-58P-201ENST00000517143 103 ntBASIC1.81□□□□□ -2.12
NCKAP1Q9Y2A7 CBX3P8-201ENST00000532412 525 ntBASIC1.81□□□□□ -2.12
NCKAP1Q9Y2A7 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.81□□□□□ -2.12
NCKAP1Q9Y2A7 MIR5701-3-201ENST00000578890 82 ntBASIC1.81□□□□□ -2.12
NCKAP1Q9Y2A7 MIR3683-201ENST00000580847 82 ntBASIC1.81□□□□□ -2.12
NCKAP1Q9Y2A7 MIR5701-1-201ENST00000585138 82 ntBASIC1.81□□□□□ -2.12
NCKAP1Q9Y2A7 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.81□□□□□ -2.12
NCKAP1Q9Y2A7 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.81□□□□□ -2.12
NCKAP1Q9Y2A7 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.81□□□□□ -2.12
NCKAP1Q9Y2A7 MIR5701-2-201ENST00000615634 82 ntBASIC1.81□□□□□ -2.12
NCKAP1Q9Y2A7 ZNF299P-201ENST00000406845 1804 ntBASIC1.81□□□□□ -2.12
NCKAP1Q9Y2A7 SNORA16.1-201ENST00000364597 132 ntBASIC1.8□□□□□ -2.12
NCKAP1Q9Y2A7 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
NCKAP1Q9Y2A7 Y_RNA.482-201ENST00000384377 111 ntBASIC1.8□□□□□ -2.12
NCKAP1Q9Y2A7 MIR9-3-201ENST00000385084 90 ntBASIC1.8□□□□□ -2.12
NCKAP1Q9Y2A7 RNU6-1050P-201ENST00000410388 107 ntBASIC1.8□□□□□ -2.12
NCKAP1Q9Y2A7 RNA5SP501-201ENST00000410990 112 ntBASIC1.8□□□□□ -2.12
NCKAP1Q9Y2A7 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.8□□□□□ -2.12
NCKAP1Q9Y2A7 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.8□□□□□ -2.12
NCKAP1Q9Y2A7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.8□□□□□ -2.12
NCKAP1Q9Y2A7 RNA5SP54-201ENST00000516951 92 ntBASIC1.8□□□□□ -2.12
NCKAP1Q9Y2A7 RNU6-250P-201ENST00000516958 103 ntBASIC1.8□□□□□ -2.12
NCKAP1Q9Y2A7 AC104581.2-201ENST00000572227 430 ntBASIC1.8□□□□□ -2.12
NCKAP1Q9Y2A7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.8□□□□□ -2.12
NCKAP1Q9Y2A7 MIR4273-201ENST00000582824 84 ntBASIC1.8□□□□□ -2.12
NCKAP1Q9Y2A7 MIR5006-201ENST00000583027 110 ntBASIC1.8□□□□□ -2.12
NCKAP1Q9Y2A7 AC005014.2-201ENST00000607795 599 ntBASIC1.8□□□□□ -2.12
NCKAP1Q9Y2A7 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.8□□□□□ -2.12
NCKAP1Q9Y2A7 ZNF204P-201ENST00000416749 2397 ntBASIC1.79□□□□□ -2.12
NCKAP1Q9Y2A7 Y_RNA.48-201ENST00000362710 103 ntBASIC1.79□□□□□ -2.12
NCKAP1Q9Y2A7 RNU6-137P-201ENST00000363680 108 ntBASIC1.79□□□□□ -2.12
NCKAP1Q9Y2A7 RNU6-438P-201ENST00000365561 103 ntBASIC1.79□□□□□ -2.12
NCKAP1Q9Y2A7 Y_RNA.490-201ENST00000384413 102 ntBASIC1.79□□□□□ -2.12
NCKAP1Q9Y2A7 MIR153-2-201ENST00000385225 87 ntBASIC1.79□□□□□ -2.12
NCKAP1Q9Y2A7 AL627390.1-201ENST00000396055 340 ntBASIC1.79□□□□□ -2.12
NCKAP1Q9Y2A7 MIR1283-1-201ENST00000408494 87 ntBASIC1.79□□□□□ -2.12
NCKAP1Q9Y2A7 RNA5SP504-201ENST00000410676 117 ntBASIC1.79□□□□□ -2.12
NCKAP1Q9Y2A7 RPL37P10-201ENST00000412884 288 ntBASIC1.79□□□□□ -2.12
NCKAP1Q9Y2A7 AL158823.1-201ENST00000418441 478 ntBASIC1.79□□□□□ -2.12
NCKAP1Q9Y2A7 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.79□□□□□ -2.12
NCKAP1Q9Y2A7 AC107399.1-201ENST00000451226 265 ntBASIC1.79□□□□□ -2.12
NCKAP1Q9Y2A7 AC007395.1-201ENST00000451333 677 ntBASIC1.79□□□□□ -2.12
NCKAP1Q9Y2A7 AC116353.2-201ENST00000505332 712 ntBASIC1.79□□□□□ -2.12
NCKAP1Q9Y2A7 AP005660.1-201ENST00000522972 293 ntBASIC1.79□□□□□ -2.12
NCKAP1Q9Y2A7 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.79□□□□□ -2.12
NCKAP1Q9Y2A7 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.79□□□□□ -2.12
NCKAP1Q9Y2A7 SNRPGP20-201ENST00000604477 205 ntBASIC1.79□□□□□ -2.12
NCKAP1Q9Y2A7 MIR8081-201ENST00000611533 95 ntBASIC1.79□□□□□ -2.12
NCKAP1Q9Y2A7 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
NCKAP1Q9Y2A7 MTND4P12-201ENST00000498999 1377 ntBASIC1.78□□□□□ -2.12
NCKAP1Q9Y2A7 RNU6-23P-201ENST00000363283 107 ntBASIC1.78□□□□□ -2.12
NCKAP1Q9Y2A7 Y_RNA.319-201ENST00000365138 92 ntBASIC1.78□□□□□ -2.12
NCKAP1Q9Y2A7 Y_RNA.404-201ENST00000383978 102 ntBASIC1.78□□□□□ -2.12
NCKAP1Q9Y2A7 Y_RNA.474-201ENST00000384341 102 ntBASIC1.78□□□□□ -2.12
NCKAP1Q9Y2A7 SNORA8-201ENST00000384574 139 ntBASIC1.78□□□□□ -2.12
NCKAP1Q9Y2A7 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
NCKAP1Q9Y2A7 MIR300-201ENST00000401138 83 ntBASIC1.78□□□□□ -2.12
NCKAP1Q9Y2A7 RNA5SP489-201ENST00000410986 109 ntBASIC1.78□□□□□ -2.12
NCKAP1Q9Y2A7 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.78□□□□□ -2.12
NCKAP1Q9Y2A7 RPL31P63-201ENST00000422565 375 ntBASIC1.78□□□□□ -2.12
NCKAP1Q9Y2A7 MTCO3P29-201ENST00000432119 779 ntBASIC1.78□□□□□ -2.12
NCKAP1Q9Y2A7 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.78□□□□□ -2.12
NCKAP1Q9Y2A7 RN7SKP210-201ENST00000459176 261 ntBASIC1.78□□□□□ -2.12
NCKAP1Q9Y2A7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
NCKAP1Q9Y2A7 RNVU1-2-201ENST00000516326 135 ntBASIC1.78□□□□□ -2.12
NCKAP1Q9Y2A7 RNA5SP384-201ENST00000516615 116 ntBASIC1.78□□□□□ -2.12
NCKAP1Q9Y2A7 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.78□□□□□ -2.12
NCKAP1Q9Y2A7 AL590705.4-201ENST00000532209 134 ntBASIC1.78□□□□□ -2.12
NCKAP1Q9Y2A7 RRN3P3-201ENST00000549207 578 ntBASIC1.78□□□□□ -2.12
NCKAP1Q9Y2A7 uc_338.5-201ENST00000611839 155 ntBASIC1.78□□□□□ -2.12
NCKAP1Q9Y2A7 AL355073.2-201ENST00000612106 557 ntBASIC1.78□□□□□ -2.12
NCKAP1Q9Y2A7 AL773524.1-201ENST00000614065 229 ntBASIC1.78□□□□□ -2.12
NCKAP1Q9Y2A7 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.78□□□□□ -2.12
NCKAP1Q9Y2A7 AC130454.1-201ENST00000622948 401 ntBASIC1.78□□□□□ -2.12
NCKAP1Q9Y2A7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
NCKAP1Q9Y2A7 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
NCKAP1Q9Y2A7 Y_RNA.303-201ENST00000364998 94 ntBASIC1.77□□□□□ -2.13
NCKAP1Q9Y2A7 Y_RNA.405-201ENST00000383979 100 ntBASIC1.77□□□□□ -2.13
NCKAP1Q9Y2A7 RNU6-245P-201ENST00000384020 107 ntBASIC1.77□□□□□ -2.13
NCKAP1Q9Y2A7 Y_RNA.451-201ENST00000384200 100 ntBASIC1.77□□□□□ -2.13
NCKAP1Q9Y2A7 RNU6-601P-201ENST00000384540 107 ntBASIC1.77□□□□□ -2.13
NCKAP1Q9Y2A7 Y_RNA.524-201ENST00000384564 100 ntBASIC1.77□□□□□ -2.13
NCKAP1Q9Y2A7 Y_RNA.561-201ENST00000384694 100 ntBASIC1.77□□□□□ -2.13
NCKAP1Q9Y2A7 SNORA48.1-201ENST00000390879 135 ntBASIC1.77□□□□□ -2.13
NCKAP1Q9Y2A7 RNU6-159P-201ENST00000391080 106 ntBASIC1.77□□□□□ -2.13
NCKAP1Q9Y2A7 AC244636.1-201ENST00000421152 228 ntBASIC1.77□□□□□ -2.13
NCKAP1Q9Y2A7 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.77□□□□□ -2.13
NCKAP1Q9Y2A7 AL357134.1-201ENST00000445848 426 ntBASIC1.77□□□□□ -2.13
NCKAP1Q9Y2A7 MTND3P10-201ENST00000450967 341 ntBASIC1.77□□□□□ -2.13
NCKAP1Q9Y2A7 SNORD13-201ENST00000459299 104 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms