Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC015911.1-201ENST00000495111 156 ntBASIC-0.41□□□□□ -2.47
SHANK2Q9UPX8 AC021451.1-201ENST00000523498 1129 ntBASIC-0.41□□□□□ -2.47
SHANK2Q9UPX8 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.41□□□□□ -2.47
SHANK2Q9UPX8 RPL17P51-201ENST00000605218 238 ntBASIC-0.41□□□□□ -2.47
SHANK2Q9UPX8 RMST_7.1-201ENST00000621935 268 ntBASIC-0.41□□□□□ -2.47
SHANK2Q9UPX8 U6.108-201ENST00000637764 58 ntBASIC-0.41□□□□□ -2.47
SHANK2Q9UPX8 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.41□□□□□ -2.47
SHANK2Q9UPX8 MIR1-1-201ENST00000362147 71 ntBASIC-0.41□□□□□ -2.48
SHANK2Q9UPX8 AC083799.1-201ENST00000366451 910 ntBASIC-0.41□□□□□ -2.48
SHANK2Q9UPX8 RNU6-378P-201ENST00000384324 107 ntBASIC-0.41□□□□□ -2.48
SHANK2Q9UPX8 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.41□□□□□ -2.48
SHANK2Q9UPX8 AL663109.1-201ENST00000411498 844 ntBASIC-0.41□□□□□ -2.48
SHANK2Q9UPX8 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.41□□□□□ -2.48
SHANK2Q9UPX8 HSFY7P-201ENST00000432672 318 ntBASIC-0.41□□□□□ -2.48
SHANK2Q9UPX8 HSFY8P-201ENST00000437934 318 ntBASIC-0.41□□□□□ -2.48
SHANK2Q9UPX8 AC093019.1-201ENST00000443135 252 ntBASIC-0.41□□□□□ -2.48
SHANK2Q9UPX8 ZNF736P5Y-201ENST00000451173 805 ntBASIC-0.41□□□□□ -2.48
SHANK2Q9UPX8 RNY4P37-201ENST00000516225 96 ntBASIC-0.41□□□□□ -2.48
SHANK2Q9UPX8 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.41□□□□□ -2.48
SHANK2Q9UPX8 RNU1-117P-201ENST00000517041 158 ntBASIC-0.41□□□□□ -2.48
SHANK2Q9UPX8 AP003716.2-201ENST00000528260 108 ntBASIC-0.41□□□□□ -2.48
SHANK2Q9UPX8 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.41□□□□□ -2.48
SHANK2Q9UPX8 LRRC6P1-201ENST00000532188 885 ntBASIC-0.41□□□□□ -2.48
SHANK2Q9UPX8 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-0.41□□□□□ -2.48
SHANK2Q9UPX8 MIR3146-201ENST00000580367 79 ntBASIC-0.41□□□□□ -2.48
SHANK2Q9UPX8 AL162424.1-201ENST00000602325 221 ntBASIC-0.41□□□□□ -2.48
SHANK2Q9UPX8 AC112187.2-201ENST00000604345 283 ntBASIC-0.41□□□□□ -2.48
SHANK2Q9UPX8 MIR8076-201ENST00000611401 83 ntBASIC-0.41□□□□□ -2.48
SHANK2Q9UPX8 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.42□□□□□ -2.48
SHANK2Q9UPX8 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-0.42□□□□□ -2.48
SHANK2Q9UPX8 RNA5SP275-201ENST00000363936 118 ntBASIC-0.42□□□□□ -2.48
SHANK2Q9UPX8 RNU6-777P-201ENST00000364265 104 ntBASIC-0.42□□□□□ -2.48
SHANK2Q9UPX8 Y_RNA.408-201ENST00000383987 102 ntBASIC-0.42□□□□□ -2.48
SHANK2Q9UPX8 CDK8P2-201ENST00000415020 547 ntBASIC-0.42□□□□□ -2.48
SHANK2Q9UPX8 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-0.42□□□□□ -2.48
SHANK2Q9UPX8 TPT1P7-201ENST00000458300 517 ntBASIC-0.42□□□□□ -2.48
SHANK2Q9UPX8 AC114811.1-201ENST00000507207 168 ntBASIC-0.42□□□□□ -2.48
SHANK2Q9UPX8 RNU6-1146P-201ENST00000516282 102 ntBASIC-0.42□□□□□ -2.48
SHANK2Q9UPX8 Y_RNA.689-201ENST00000516589 107 ntBASIC-0.42□□□□□ -2.48
SHANK2Q9UPX8 AC104072.1-201ENST00000568817 668 ntBASIC-0.42□□□□□ -2.48
SHANK2Q9UPX8 AC090517.1-201ENST00000569307 266 ntBASIC-0.42□□□□□ -2.48
SHANK2Q9UPX8 TMF1P1-201ENST00000576058 373 ntBASIC-0.42□□□□□ -2.48
SHANK2Q9UPX8 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-0.42□□□□□ -2.48
SHANK2Q9UPX8 AC138749.5-201ENST00000611461 208 ntBASIC-0.42□□□□□ -2.48
SHANK2Q9UPX8 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-0.42□□□□□ -2.48
SHANK2Q9UPX8 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.42□□□□□ -2.48
SHANK2Q9UPX8 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.42□□□□□ -2.48
SHANK2Q9UPX8 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.43□□□□□ -2.48
SHANK2Q9UPX8 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.43□□□□□ -2.48
SHANK2Q9UPX8 MIR520G-201ENST00000385064 90 ntBASIC-0.43□□□□□ -2.48
SHANK2Q9UPX8 MIR520H-201ENST00000385126 88 ntBASIC-0.43□□□□□ -2.48
SHANK2Q9UPX8 SNORA75.6-201ENST00000391318 127 ntBASIC-0.43□□□□□ -2.48
SHANK2Q9UPX8 AC096531.1-201ENST00000419107 107 ntBASIC-0.43□□□□□ -2.48
SHANK2Q9UPX8 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-0.43□□□□□ -2.48
SHANK2Q9UPX8 AC007547.1-201ENST00000462177 490 ntBASIC-0.43□□□□□ -2.48
SHANK2Q9UPX8 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-0.43□□□□□ -2.48
SHANK2Q9UPX8 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.43□□□□□ -2.48
SHANK2Q9UPX8 DEFB131E-202ENST00000602581 683 ntBASIC-0.43□□□□□ -2.48
SHANK2Q9UPX8 AL355297.3-201ENST00000604082 446 ntBASIC-0.43□□□□□ -2.48
SHANK2Q9UPX8 U6.42-201ENST00000618440 107 ntBASIC-0.43□□□□□ -2.48
SHANK2Q9UPX8 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-0.43□□□□□ -2.48
SHANK2Q9UPX8 AC026585.1-201ENST00000619582 524 ntBASIC-0.43□□□□□ -2.48
SHANK2Q9UPX8 RNU5B-1-201ENST00000363286 116 ntBASIC-0.44□□□□□ -2.48
SHANK2Q9UPX8 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-0.44□□□□□ -2.48
SHANK2Q9UPX8 MRPL42P3-201ENST00000401492 326 ntBASIC-0.44□□□□□ -2.48
SHANK2Q9UPX8 MTND4P15-201ENST00000437913 1033 ntBASIC-0.44□□□□□ -2.48
SHANK2Q9UPX8 MTCO2P7-201ENST00000446518 666 ntBASIC-0.44□□□□□ -2.48
SHANK2Q9UPX8 AC092104.1-201ENST00000497346 1441 ntBASIC-0.44□□□□□ -2.48
SHANK2Q9UPX8 RNU1-142P-201ENST00000516682 145 ntBASIC-0.44□□□□□ -2.48
SHANK2Q9UPX8 RNU2-12P-201ENST00000517216 168 ntBASIC-0.44□□□□□ -2.48
SHANK2Q9UPX8 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-0.44□□□□□ -2.48
SHANK2Q9UPX8 MIR3923-201ENST00000579521 83 ntBASIC-0.44□□□□□ -2.48
SHANK2Q9UPX8 AC008752.3-201ENST00000588113 712 ntBASIC-0.44□□□□□ -2.48
SHANK2Q9UPX8 AC174048.1-201ENST00000603389 144 ntBASIC-0.44□□□□□ -2.48
SHANK2Q9UPX8 AC104695.3-201ENST00000604052 296 ntBASIC-0.44□□□□□ -2.48
SHANK2Q9UPX8 AL445435.1-201ENST00000604232 665 ntBASIC-0.44□□□□□ -2.48
SHANK2Q9UPX8 AC090186.1-201ENST00000605991 572 ntBASIC-0.44□□□□□ -2.48
SHANK2Q9UPX8 AC104458.1-201ENST00000608243 463 ntBASIC-0.44□□□□□ -2.48
SHANK2Q9UPX8 AC007684.1-201ENST00000609671 477 ntBASIC-0.44□□□□□ -2.48
SHANK2Q9UPX8 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-0.45□□□□□ -2.48
SHANK2Q9UPX8 RNU6-756P-201ENST00000383997 107 ntBASIC-0.45□□□□□ -2.48
SHANK2Q9UPX8 RNU6-1179P-201ENST00000384667 107 ntBASIC-0.45□□□□□ -2.48
SHANK2Q9UPX8 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.45□□□□□ -2.48
SHANK2Q9UPX8 CALM2P4-201ENST00000430810 426 ntBASIC-0.45□□□□□ -2.48
SHANK2Q9UPX8 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.45□□□□□ -2.48
SHANK2Q9UPX8 AC079382.1-201ENST00000493346 557 ntBASIC-0.45□□□□□ -2.48
SHANK2Q9UPX8 RN7SKP287-201ENST00000516546 266 ntBASIC-0.45□□□□□ -2.48
SHANK2Q9UPX8 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC-0.45□□□□□ -2.48
SHANK2Q9UPX8 AP002453.2-201ENST00000533503 320 ntBASIC-0.45□□□□□ -2.48
SHANK2Q9UPX8 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-0.45□□□□□ -2.48
SHANK2Q9UPX8 MIR548AO-201ENST00000579992 96 ntBASIC-0.45□□□□□ -2.48
SHANK2Q9UPX8 PART1_2.1-201ENST00000612397 250 ntBASIC-0.45□□□□□ -2.48
SHANK2Q9UPX8 AL359075.3-201ENST00000613288 217 ntBASIC-0.45□□□□□ -2.48
SHANK2Q9UPX8 RNA5SP205-201ENST00000364653 136 ntBASIC-0.46□□□□□ -2.48
SHANK2Q9UPX8 RNU4-56P-201ENST00000364700 142 ntBASIC-0.46□□□□□ -2.48
SHANK2Q9UPX8 RNU6-190P-201ENST00000384154 102 ntBASIC-0.46□□□□□ -2.48
SHANK2Q9UPX8 U8.16-201ENST00000391279 133 ntBASIC-0.46□□□□□ -2.48
SHANK2Q9UPX8 PCNPP3-201ENST00000393579 471 ntBASIC-0.46□□□□□ -2.48
SHANK2Q9UPX8 MIR1253-201ENST00000408273 105 ntBASIC-0.46□□□□□ -2.48
SHANK2Q9UPX8 MIR1283-1-201ENST00000408494 87 ntBASIC-0.46□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms