Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 RNU7-57P-201ENST00000459540 60 ntBASIC2.02□□□□□ -2.09
BLOC1S4Q9NUP1 FO393415.2-201ENST00000480085 343 ntBASIC2.02□□□□□ -2.09
BLOC1S4Q9NUP1 HMGN1P13-201ENST00000505795 138 ntBASIC2.02□□□□□ -2.09
BLOC1S4Q9NUP1 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.02□□□□□ -2.09
BLOC1S4Q9NUP1 AC008834.1-201ENST00000511612 175 ntBASIC2.02□□□□□ -2.09
BLOC1S4Q9NUP1 RNU6-1041P-201ENST00000516254 102 ntBASIC2.02□□□□□ -2.09
BLOC1S4Q9NUP1 AC027288.2-201ENST00000553028 243 ntBASIC2.02□□□□□ -2.09
BLOC1S4Q9NUP1 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.02□□□□□ -2.09
BLOC1S4Q9NUP1 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.02□□□□□ -2.09
BLOC1S4Q9NUP1 AC068205.3-201ENST00000636385 468 ntBASIC2.02□□□□□ -2.09
BLOC1S4Q9NUP1 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.02□□□□□ -2.09
BLOC1S4Q9NUP1 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
BLOC1S4Q9NUP1 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
BLOC1S4Q9NUP1 AC010615.1-201ENST00000594254 1764 ntBASIC2.01□□□□□ -2.09
BLOC1S4Q9NUP1 RNU6-862P-201ENST00000362804 105 ntBASIC2.01□□□□□ -2.09
BLOC1S4Q9NUP1 RNU6-159P-201ENST00000391080 106 ntBASIC2.01□□□□□ -2.09
BLOC1S4Q9NUP1 AC019129.1-201ENST00000403786 261 ntBASIC2.01□□□□□ -2.09
BLOC1S4Q9NUP1 AC007098.1-201ENST00000420122 367 ntBASIC2.01□□□□□ -2.09
BLOC1S4Q9NUP1 USP9YP30-201ENST00000430729 455 ntBASIC2.01□□□□□ -2.09
BLOC1S4Q9NUP1 MTCO3P29-201ENST00000432119 779 ntBASIC2.01□□□□□ -2.09
BLOC1S4Q9NUP1 AC107399.1-201ENST00000451226 265 ntBASIC2.01□□□□□ -2.09
BLOC1S4Q9NUP1 NDUFB4P10-201ENST00000452541 359 ntBASIC2.01□□□□□ -2.09
BLOC1S4Q9NUP1 AC027575.1-201ENST00000481064 460 ntBASIC2.01□□□□□ -2.09
BLOC1S4Q9NUP1 AC010409.1-201ENST00000487382 476 ntBASIC2.01□□□□□ -2.09
BLOC1S4Q9NUP1 RPL30P10-201ENST00000488148 337 ntBASIC2.01□□□□□ -2.09
BLOC1S4Q9NUP1 AC018710.1-201ENST00000506509 158 ntBASIC2.01□□□□□ -2.09
BLOC1S4Q9NUP1 AC025465.3-201ENST00000510570 311 ntBASIC2.01□□□□□ -2.09
BLOC1S4Q9NUP1 RNU6-1016P-201ENST00000516689 94 ntBASIC2.01□□□□□ -2.09
BLOC1S4Q9NUP1 RNA5SP481-201ENST00000516814 122 ntBASIC2.01□□□□□ -2.09
BLOC1S4Q9NUP1 Y_RNA.706-201ENST00000516933 99 ntBASIC2.01□□□□□ -2.09
BLOC1S4Q9NUP1 RNA5SP364-201ENST00000516938 78 ntBASIC2.01□□□□□ -2.09
BLOC1S4Q9NUP1 SNORA31.17-201ENST00000516953 127 ntBASIC2.01□□□□□ -2.09
BLOC1S4Q9NUP1 MTND4LP26-201ENST00000518144 282 ntBASIC2.01□□□□□ -2.09
BLOC1S4Q9NUP1 MIR4448-201ENST00000584360 86 ntBASIC2.01□□□□□ -2.09
BLOC1S4Q9NUP1 AC100812.1-201ENST00000607622 580 ntBASIC2.01□□□□□ -2.09
BLOC1S4Q9NUP1 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.01□□□□□ -2.09
BLOC1S4Q9NUP1 snoZ196.1-201ENST00000625269 89 ntBASIC2.01□□□□□ -2.09
BLOC1S4Q9NUP1 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.01□□□□□ -2.09
BLOC1S4Q9NUP1 AL356292.1-201ENST00000283110 373 ntBASIC2□□□□□ -2.09
BLOC1S4Q9NUP1 SNORD48-201ENST00000364953 64 ntBASIC2□□□□□ -2.09
BLOC1S4Q9NUP1 SNORA67.2-201ENST00000384300 149 ntBASIC2□□□□□ -2.09
BLOC1S4Q9NUP1 Y_RNA.533-201ENST00000384596 114 ntBASIC2□□□□□ -2.09
BLOC1S4Q9NUP1 SNORA40.18-201ENST00000391200 128 ntBASIC2□□□□□ -2.09
BLOC1S4Q9NUP1 SNORA11.2-201ENST00000408318 127 ntBASIC2□□□□□ -2.09
BLOC1S4Q9NUP1 AC060773.1-201ENST00000421698 310 ntBASIC2□□□□□ -2.09
BLOC1S4Q9NUP1 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2□□□□□ -2.09
BLOC1S4Q9NUP1 snoU13.15-201ENST00000459407 104 ntBASIC2□□□□□ -2.09
BLOC1S4Q9NUP1 RPL36AP21-201ENST00000490372 323 ntBASIC2□□□□□ -2.09
BLOC1S4Q9NUP1 RN7SL274P-201ENST00000492268 272 ntBASIC2□□□□□ -2.09
BLOC1S4Q9NUP1 AC082651.2-201ENST00000496833 166 ntBASIC2□□□□□ -2.09
BLOC1S4Q9NUP1 RNA5SP384-201ENST00000516615 116 ntBASIC2□□□□□ -2.09
BLOC1S4Q9NUP1 RNU1-117P-201ENST00000517041 158 ntBASIC2□□□□□ -2.09
BLOC1S4Q9NUP1 AC005668.1-201ENST00000571142 476 ntBASIC2□□□□□ -2.09
BLOC1S4Q9NUP1 MIR4419B-201ENST00000577260 68 ntBASIC2□□□□□ -2.09
BLOC1S4Q9NUP1 AC018462.2-201ENST00000605375 395 ntBASIC2□□□□□ -2.09
BLOC1S4Q9NUP1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2□□□□□ -2.09
BLOC1S4Q9NUP1 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2□□□□□ -2.09
BLOC1S4Q9NUP1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.99□□□□□ -2.09
BLOC1S4Q9NUP1 U3.8-201ENST00000363675 217 ntBASIC1.99□□□□□ -2.09
BLOC1S4Q9NUP1 RNU6-873P-201ENST00000363833 107 ntBASIC1.99□□□□□ -2.09
BLOC1S4Q9NUP1 MIR487A-201ENST00000385009 80 ntBASIC1.99□□□□□ -2.09
BLOC1S4Q9NUP1 MIR1253-201ENST00000408273 105 ntBASIC1.99□□□□□ -2.09
BLOC1S4Q9NUP1 MIR548K-201ENST00000408406 116 ntBASIC1.99□□□□□ -2.09
BLOC1S4Q9NUP1 RNU2-7P-201ENST00000410794 178 ntBASIC1.99□□□□□ -2.09
BLOC1S4Q9NUP1 RNU2-40P-201ENST00000410833 196 ntBASIC1.99□□□□□ -2.09
BLOC1S4Q9NUP1 Y_RNA.619-201ENST00000410951 90 ntBASIC1.99□□□□□ -2.09
BLOC1S4Q9NUP1 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.99□□□□□ -2.09
BLOC1S4Q9NUP1 AC099677.2-201ENST00000436385 175 ntBASIC1.99□□□□□ -2.09
BLOC1S4Q9NUP1 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.99□□□□□ -2.09
BLOC1S4Q9NUP1 AC016717.1-201ENST00000448918 286 ntBASIC1.99□□□□□ -2.09
BLOC1S4Q9NUP1 HMGB3P17-201ENST00000504195 649 ntBASIC1.99□□□□□ -2.09
BLOC1S4Q9NUP1 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.99□□□□□ -2.09
BLOC1S4Q9NUP1 MIR6845-201ENST00000613182 61 ntBASIC1.99□□□□□ -2.09
BLOC1S4Q9NUP1 MIR8074-201ENST00000615081 81 ntBASIC1.99□□□□□ -2.09
BLOC1S4Q9NUP1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
BLOC1S4Q9NUP1 snoU2-30.2-201ENST00000362805 70 ntBASIC1.98□□□□□ -2.09
BLOC1S4Q9NUP1 RNU6-414P-201ENST00000363705 104 ntBASIC1.98□□□□□ -2.09
BLOC1S4Q9NUP1 RNU6-793P-201ENST00000384233 104 ntBASIC1.98□□□□□ -2.09
BLOC1S4Q9NUP1 RNU6-296P-201ENST00000384608 107 ntBASIC1.98□□□□□ -2.09
BLOC1S4Q9NUP1 MIR934-201ENST00000401241 83 ntBASIC1.98□□□□□ -2.09
BLOC1S4Q9NUP1 AL117342.1-201ENST00000404861 406 ntBASIC1.98□□□□□ -2.09
BLOC1S4Q9NUP1 RNU6-57P-201ENST00000411348 103 ntBASIC1.98□□□□□ -2.09
BLOC1S4Q9NUP1 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.98□□□□□ -2.09
BLOC1S4Q9NUP1 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.98□□□□□ -2.09
BLOC1S4Q9NUP1 AL121579.1-201ENST00000555129 305 ntBASIC1.98□□□□□ -2.09
BLOC1S4Q9NUP1 AL158827.2-201ENST00000602494 330 ntBASIC1.98□□□□□ -2.09
BLOC1S4Q9NUP1 AL691447.3-201ENST00000635020 330 ntBASIC1.98□□□□□ -2.09
BLOC1S4Q9NUP1 MIR338-201ENST00000636369 67 ntBASIC1.98□□□□□ -2.09
BLOC1S4Q9NUP1 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
BLOC1S4Q9NUP1 Y_RNA.405-201ENST00000383979 100 ntBASIC1.97□□□□□ -2.09
BLOC1S4Q9NUP1 RNU6-767P-201ENST00000384132 107 ntBASIC1.97□□□□□ -2.09
BLOC1S4Q9NUP1 Y_RNA.451-201ENST00000384200 100 ntBASIC1.97□□□□□ -2.09
BLOC1S4Q9NUP1 Y_RNA.524-201ENST00000384564 100 ntBASIC1.97□□□□□ -2.09
BLOC1S4Q9NUP1 Y_RNA.561-201ENST00000384694 100 ntBASIC1.97□□□□□ -2.09
BLOC1S4Q9NUP1 RNU6-360P-201ENST00000390944 104 ntBASIC1.97□□□□□ -2.09
BLOC1S4Q9NUP1 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
BLOC1S4Q9NUP1 RPL30P16-201ENST00000419341 429 ntBASIC1.97□□□□□ -2.09
BLOC1S4Q9NUP1 RNU6-221P-201ENST00000459541 99 ntBASIC1.97□□□□□ -2.09
BLOC1S4Q9NUP1 AC069439.1-201ENST00000494739 167 ntBASIC1.97□□□□□ -2.09
BLOC1S4Q9NUP1 RNU6-307P-201ENST00000516743 106 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 143.7 ms