Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
FOXD4L1Q9NU39 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
FOXD4L1Q9NU39 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
FOXD4L1Q9NU39 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.73□□□□□ -1.49
FOXD4L1Q9NU39 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
FOXD4L1Q9NU39 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC5.72□□□□□ -1.49
FOXD4L1Q9NU39 RNA5SP183-201ENST00000362452 119 ntBASIC5.72□□□□□ -1.49
FOXD4L1Q9NU39 RNA5SP387-201ENST00000364226 106 ntBASIC5.72□□□□□ -1.49
FOXD4L1Q9NU39 MIR95-201ENST00000385072 81 ntBASIC5.72□□□□□ -1.49
FOXD4L1Q9NU39 SNORD77B-201ENST00000391112 67 ntBASIC5.72□□□□□ -1.49
FOXD4L1Q9NU39 ATP5J2P3-201ENST00000451550 258 ntBASIC5.72□□□□□ -1.49
FOXD4L1Q9NU39 CYCSP35-201ENST00000451978 304 ntBASIC5.72□□□□□ -1.49
FOXD4L1Q9NU39 RN7SL517P-201ENST00000462240 305 ntBASIC5.72□□□□□ -1.49
FOXD4L1Q9NU39 RPS21P4-201ENST00000487122 248 ntBASIC5.72□□□□□ -1.49
FOXD4L1Q9NU39 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.72□□□□□ -1.49
FOXD4L1Q9NU39 RNU6-998P-201ENST00000515894 101 ntBASIC5.72□□□□□ -1.49
FOXD4L1Q9NU39 RNU6-1018P-201ENST00000516577 106 ntBASIC5.72□□□□□ -1.49
FOXD4L1Q9NU39 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
FOXD4L1Q9NU39 AL161912.2-201ENST00000565707 3007 ntBASIC5.72□□□□□ -1.49
FOXD4L1Q9NU39 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
FOXD4L1Q9NU39 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
FOXD4L1Q9NU39 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
FOXD4L1Q9NU39 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
FOXD4L1Q9NU39 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.71□□□□□ -1.5
FOXD4L1Q9NU39 RNA5SP132-201ENST00000364725 118 ntBASIC5.71□□□□□ -1.5
FOXD4L1Q9NU39 Y_RNA.620-201ENST00000411009 88 ntBASIC5.71□□□□□ -1.5
FOXD4L1Q9NU39 AL162591.2-201ENST00000449634 317 ntBASIC5.71□□□□□ -1.5
FOXD4L1Q9NU39 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.71□□□□□ -1.5
FOXD4L1Q9NU39 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.71□□□□□ -1.5
FOXD4L1Q9NU39 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC5.71□□□□□ -1.5
FOXD4L1Q9NU39 AL356218.2-201ENST00000605264 187 ntBASIC5.71□□□□□ -1.5
FOXD4L1Q9NU39 AC008079.2-201ENST00000623543 20396 ntBASIC5.71□□□□□ -1.5
FOXD4L1Q9NU39 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
FOXD4L1Q9NU39 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
FOXD4L1Q9NU39 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
FOXD4L1Q9NU39 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
FOXD4L1Q9NU39 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
FOXD4L1Q9NU39 AC139713.2-215ENST00000641428 5037 ntBASIC5.7□□□□□ -1.5
FOXD4L1Q9NU39 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
FOXD4L1Q9NU39 RNA5SP295-201ENST00000362655 121 ntBASIC5.7□□□□□ -1.5
FOXD4L1Q9NU39 RNU6-776P-201ENST00000364403 104 ntBASIC5.7□□□□□ -1.5
FOXD4L1Q9NU39 RNU6-1022P-201ENST00000365049 104 ntBASIC5.7□□□□□ -1.5
FOXD4L1Q9NU39 Y_RNA.467-201ENST00000384297 102 ntBASIC5.7□□□□□ -1.5
FOXD4L1Q9NU39 AL353813.1-201ENST00000440700 253 ntBASIC5.7□□□□□ -1.5
FOXD4L1Q9NU39 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.7□□□□□ -1.5
FOXD4L1Q9NU39 IGLV2-28-201ENST00000520681 304 ntBASIC5.7□□□□□ -1.5
FOXD4L1Q9NU39 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
FOXD4L1Q9NU39 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC5.7□□□□□ -1.5
FOXD4L1Q9NU39 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC5.7□□□□□ -1.5
FOXD4L1Q9NU39 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
FOXD4L1Q9NU39 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
FOXD4L1Q9NU39 SNORD116-10-201ENST00000363791 102 ntBASIC5.69□□□□□ -1.5
FOXD4L1Q9NU39 RN7SKP103-201ENST00000363848 320 ntBASIC5.69□□□□□ -1.5
FOXD4L1Q9NU39 RNU6-1201P-201ENST00000384227 107 ntBASIC5.69□□□□□ -1.5
FOXD4L1Q9NU39 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC5.69□□□□□ -1.5
FOXD4L1Q9NU39 RNU7-113P-201ENST00000459273 62 ntBASIC5.69□□□□□ -1.5
FOXD4L1Q9NU39 RN7SL812P-201ENST00000493791 279 ntBASIC5.69□□□□□ -1.5
FOXD4L1Q9NU39 AL163195.1-201ENST00000496941 348 ntBASIC5.69□□□□□ -1.5
FOXD4L1Q9NU39 SNORA74C-1-201ENST00000580726 201 ntBASIC5.69□□□□□ -1.5
FOXD4L1Q9NU39 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.69□□□□□ -1.5
FOXD4L1Q9NU39 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
FOXD4L1Q9NU39 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
FOXD4L1Q9NU39 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
FOXD4L1Q9NU39 AC092435.4-201ENST00000623012 4159 ntBASIC5.69□□□□□ -1.5
FOXD4L1Q9NU39 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC5.69□□□□□ -1.5
FOXD4L1Q9NU39 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
FOXD4L1Q9NU39 RNU6-1328P-201ENST00000410938 106 ntBASIC5.68□□□□□ -1.5
FOXD4L1Q9NU39 RN7SL636P-201ENST00000497504 294 ntBASIC5.68□□□□□ -1.5
FOXD4L1Q9NU39 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC5.68□□□□□ -1.5
FOXD4L1Q9NU39 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.68□□□□□ -1.5
FOXD4L1Q9NU39 ZNF861P-201ENST00000588126 639 ntBASIC5.68□□□□□ -1.5
FOXD4L1Q9NU39 AL356280.1-201ENST00000603614 379 ntBASIC5.68□□□□□ -1.5
FOXD4L1Q9NU39 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
FOXD4L1Q9NU39 MIR6837-201ENST00000620884 64 ntBASIC5.68□□□□□ -1.5
FOXD4L1Q9NU39 MIR7515-201ENST00000637837 67 ntBASIC5.68□□□□□ -1.5
FOXD4L1Q9NU39 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
FOXD4L1Q9NU39 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC5.68□□□□□ -1.5
FOXD4L1Q9NU39 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
FOXD4L1Q9NU39 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.68□□□□□ -1.5
FOXD4L1Q9NU39 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
FOXD4L1Q9NU39 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
FOXD4L1Q9NU39 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
FOXD4L1Q9NU39 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
FOXD4L1Q9NU39 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
FOXD4L1Q9NU39 Y_RNA.611-201ENST00000410682 108 ntBASIC5.67□□□□□ -1.5
FOXD4L1Q9NU39 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC5.67□□□□□ -1.5
FOXD4L1Q9NU39 RPS26P2-201ENST00000440331 348 ntBASIC5.67□□□□□ -1.5
FOXD4L1Q9NU39 RN7SL558P-201ENST00000497468 299 ntBASIC5.67□□□□□ -1.5
FOXD4L1Q9NU39 RNU7-28P-201ENST00000516759 62 ntBASIC5.67□□□□□ -1.5
FOXD4L1Q9NU39 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.67□□□□□ -1.5
FOXD4L1Q9NU39 AC007225.2-201ENST00000562529 256 ntBASIC5.67□□□□□ -1.5
FOXD4L1Q9NU39 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.67□□□□□ -1.5
FOXD4L1Q9NU39 MIR4691-201ENST00000583764 85 ntBASIC5.67□□□□□ -1.5
FOXD4L1Q9NU39 uc_338.18-201ENST00000615451 175 ntBASIC5.67□□□□□ -1.5
FOXD4L1Q9NU39 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC5.67□□□□□ -1.5
FOXD4L1Q9NU39 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
FOXD4L1Q9NU39 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
FOXD4L1Q9NU39 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
FOXD4L1Q9NU39 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
FOXD4L1Q9NU39 RNA5SP428-201ENST00000365129 132 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 175.6 ms