Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.16□□□□□ -2.06
SLC6A13Q9NSD5 AC068205.3-201ENST00000636385 468 ntBASIC2.16□□□□□ -2.06
SLC6A13Q9NSD5 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
SLC6A13Q9NSD5 AC006026.1-201ENST00000444025 1803 ntBASIC2.16□□□□□ -2.06
SLC6A13Q9NSD5 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.16□□□□□ -2.06
SLC6A13Q9NSD5 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SLC6A13Q9NSD5 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SLC6A13Q9NSD5 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
SLC6A13Q9NSD5 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.15□□□□□ -2.07
SLC6A13Q9NSD5 SNORD115-3-201ENST00000363100 82 ntBASIC2.15□□□□□ -2.07
SLC6A13Q9NSD5 Y_RNA.179-201ENST00000363844 90 ntBASIC2.15□□□□□ -2.07
SLC6A13Q9NSD5 RNU6-1164P-201ENST00000364428 107 ntBASIC2.15□□□□□ -2.07
SLC6A13Q9NSD5 Y_RNA.252-201ENST00000364556 101 ntBASIC2.15□□□□□ -2.07
SLC6A13Q9NSD5 Y_RNA.592-201ENST00000410274 109 ntBASIC2.15□□□□□ -2.07
SLC6A13Q9NSD5 RNA5SP504-201ENST00000410676 117 ntBASIC2.15□□□□□ -2.07
SLC6A13Q9NSD5 RNU6-1001P-201ENST00000411265 100 ntBASIC2.15□□□□□ -2.07
SLC6A13Q9NSD5 AC114482.1-201ENST00000418010 247 ntBASIC2.15□□□□□ -2.07
SLC6A13Q9NSD5 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.15□□□□□ -2.07
SLC6A13Q9NSD5 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.15□□□□□ -2.07
SLC6A13Q9NSD5 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.15□□□□□ -2.07
SLC6A13Q9NSD5 U8.22-201ENST00000459141 133 ntBASIC2.15□□□□□ -2.07
SLC6A13Q9NSD5 AC104435.1-201ENST00000483483 166 ntBASIC2.15□□□□□ -2.07
SLC6A13Q9NSD5 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.15□□□□□ -2.07
SLC6A13Q9NSD5 Y_RNA.683-201ENST00000516508 93 ntBASIC2.15□□□□□ -2.07
SLC6A13Q9NSD5 RNU1-117P-201ENST00000517041 158 ntBASIC2.15□□□□□ -2.07
SLC6A13Q9NSD5 SNORD116.3-201ENST00000517176 78 ntBASIC2.15□□□□□ -2.07
SLC6A13Q9NSD5 MIR3945-201ENST00000581853 98 ntBASIC2.15□□□□□ -2.07
SLC6A13Q9NSD5 MIR3124-201ENST00000582636 67 ntBASIC2.15□□□□□ -2.07
SLC6A13Q9NSD5 MIR5007-201ENST00000583098 95 ntBASIC2.15□□□□□ -2.07
SLC6A13Q9NSD5 AC091925.1-201ENST00000623204 462 ntBASIC2.15□□□□□ -2.07
SLC6A13Q9NSD5 AC012640.5-201ENST00000623897 319 ntBASIC2.15□□□□□ -2.07
SLC6A13Q9NSD5 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.15□□□□□ -2.07
SLC6A13Q9NSD5 LINC02555-201ENST00000563933 1951 ntBASIC2.14□□□□□ -2.07
SLC6A13Q9NSD5 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SLC6A13Q9NSD5 AL596028.1-201ENST00000326971 197 ntBASIC2.14□□□□□ -2.07
SLC6A13Q9NSD5 RNU6-1305P-201ENST00000364353 104 ntBASIC2.14□□□□□ -2.07
SLC6A13Q9NSD5 RNU4-42P-201ENST00000364738 142 ntBASIC2.14□□□□□ -2.07
SLC6A13Q9NSD5 SNORD42.2-201ENST00000365570 69 ntBASIC2.14□□□□□ -2.07
SLC6A13Q9NSD5 MIR518A2-201ENST00000384966 87 ntBASIC2.14□□□□□ -2.07
SLC6A13Q9NSD5 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
SLC6A13Q9NSD5 AL033519.2-201ENST00000403958 392 ntBASIC2.14□□□□□ -2.07
SLC6A13Q9NSD5 SNORD23.1-201ENST00000408212 104 ntBASIC2.14□□□□□ -2.07
SLC6A13Q9NSD5 OOSP1P1-201ENST00000423265 274 ntBASIC2.14□□□□□ -2.07
SLC6A13Q9NSD5 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.14□□□□□ -2.07
SLC6A13Q9NSD5 AC139712.2-201ENST00000424302 339 ntBASIC2.14□□□□□ -2.07
SLC6A13Q9NSD5 AC074290.1-201ENST00000448883 135 ntBASIC2.14□□□□□ -2.07
SLC6A13Q9NSD5 Y_RNA.639-201ENST00000458981 102 ntBASIC2.14□□□□□ -2.07
SLC6A13Q9NSD5 AC010531.2-201ENST00000465012 153 ntBASIC2.14□□□□□ -2.07
SLC6A13Q9NSD5 AC022868.1-201ENST00000517767 391 ntBASIC2.14□□□□□ -2.07
SLC6A13Q9NSD5 MIR4529-201ENST00000578110 78 ntBASIC2.14□□□□□ -2.07
SLC6A13Q9NSD5 AC090971.5-201ENST00000621102 293 ntBASIC2.14□□□□□ -2.07
SLC6A13Q9NSD5 AL078596.1-201ENST00000624856 447 ntBASIC2.14□□□□□ -2.07
SLC6A13Q9NSD5 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.14□□□□□ -2.07
SLC6A13Q9NSD5 AP006437.1-201ENST00000641440 3685 ntBASIC2.13□□□□□ -2.07
SLC6A13Q9NSD5 MIR340-201ENST00000362125 95 ntBASIC2.13□□□□□ -2.07
SLC6A13Q9NSD5 Y_RNA.5-201ENST00000362334 102 ntBASIC2.13□□□□□ -2.07
SLC6A13Q9NSD5 RNU6-879P-201ENST00000364328 108 ntBASIC2.13□□□□□ -2.07
SLC6A13Q9NSD5 Y_RNA.395-201ENST00000383945 109 ntBASIC2.13□□□□□ -2.07
SLC6A13Q9NSD5 Y_RNA.496-201ENST00000384444 101 ntBASIC2.13□□□□□ -2.07
SLC6A13Q9NSD5 AL355497.1-201ENST00000406262 551 ntBASIC2.13□□□□□ -2.07
SLC6A13Q9NSD5 Y_RNA.605-201ENST00000410577 105 ntBASIC2.13□□□□□ -2.07
SLC6A13Q9NSD5 AC018865.2-201ENST00000423631 129 ntBASIC2.13□□□□□ -2.07
SLC6A13Q9NSD5 MTCO1P44-201ENST00000441935 243 ntBASIC2.13□□□□□ -2.07
SLC6A13Q9NSD5 IPO7P1-201ENST00000442031 636 ntBASIC2.13□□□□□ -2.07
SLC6A13Q9NSD5 AC010095.1-201ENST00000443543 144 ntBASIC2.13□□□□□ -2.07
SLC6A13Q9NSD5 AL357134.1-201ENST00000445848 426 ntBASIC2.13□□□□□ -2.07
SLC6A13Q9NSD5 RNU1-131P-201ENST00000458943 161 ntBASIC2.13□□□□□ -2.07
SLC6A13Q9NSD5 TRBV12-1-201ENST00000479785 344 ntBASIC2.13□□□□□ -2.07
SLC6A13Q9NSD5 RNU6-911P-201ENST00000516523 104 ntBASIC2.13□□□□□ -2.07
SLC6A13Q9NSD5 RNU2-34P-201ENST00000516534 121 ntBASIC2.13□□□□□ -2.07
SLC6A13Q9NSD5 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.13□□□□□ -2.07
SLC6A13Q9NSD5 AC091544.4-201ENST00000555268 342 ntBASIC2.13□□□□□ -2.07
SLC6A13Q9NSD5 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.13□□□□□ -2.07
SLC6A13Q9NSD5 MZT1P2-201ENST00000604387 248 ntBASIC2.13□□□□□ -2.07
SLC6A13Q9NSD5 AC130454.1-201ENST00000622948 401 ntBASIC2.13□□□□□ -2.07
SLC6A13Q9NSD5 MTND5P35-201ENST00000557537 1720 ntBASIC2.13□□□□□ -2.07
SLC6A13Q9NSD5 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.12□□□□□ -2.07
SLC6A13Q9NSD5 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
SLC6A13Q9NSD5 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.12□□□□□ -2.07
SLC6A13Q9NSD5 RNU1-58P-201ENST00000362413 163 ntBASIC2.12□□□□□ -2.07
SLC6A13Q9NSD5 RNA5SP361-201ENST00000362686 118 ntBASIC2.12□□□□□ -2.07
SLC6A13Q9NSD5 RNU6-1301P-201ENST00000362724 104 ntBASIC2.12□□□□□ -2.07
SLC6A13Q9NSD5 Y_RNA.112-201ENST00000363250 102 ntBASIC2.12□□□□□ -2.07
SLC6A13Q9NSD5 RNU6-727P-201ENST00000363592 107 ntBASIC2.12□□□□□ -2.07
SLC6A13Q9NSD5 RNU1-115P-201ENST00000365329 160 ntBASIC2.12□□□□□ -2.07
SLC6A13Q9NSD5 Y_RNA.415-201ENST00000384012 112 ntBASIC2.12□□□□□ -2.07
SLC6A13Q9NSD5 RNU6-975P-201ENST00000384296 105 ntBASIC2.12□□□□□ -2.07
SLC6A13Q9NSD5 MIR329-1-201ENST00000385028 80 ntBASIC2.12□□□□□ -2.07
SLC6A13Q9NSD5 RNA5SP465-201ENST00000391195 109 ntBASIC2.12□□□□□ -2.07
SLC6A13Q9NSD5 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.12□□□□□ -2.07
SLC6A13Q9NSD5 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.12□□□□□ -2.07
SLC6A13Q9NSD5 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.12□□□□□ -2.07
SLC6A13Q9NSD5 NDUFB4P10-201ENST00000452541 359 ntBASIC2.12□□□□□ -2.07
SLC6A13Q9NSD5 RNU7-169P-201ENST00000459456 61 ntBASIC2.12□□□□□ -2.07
SLC6A13Q9NSD5 RN7SL636P-201ENST00000497504 294 ntBASIC2.12□□□□□ -2.07
SLC6A13Q9NSD5 AC008413.1-201ENST00000511864 177 ntBASIC2.12□□□□□ -2.07
SLC6A13Q9NSD5 AC067942.3-201ENST00000512025 362 ntBASIC2.12□□□□□ -2.07
SLC6A13Q9NSD5 Y_RNA.661-201ENST00000516003 99 ntBASIC2.12□□□□□ -2.07
SLC6A13Q9NSD5 RN7SKP49-201ENST00000516675 260 ntBASIC2.12□□□□□ -2.07
SLC6A13Q9NSD5 CYCSP23-201ENST00000519781 313 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms