Protein–RNA interactions for Protein: Q9H741

C12orf49, UPF0454 protein C12orf49, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49Q9H741 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
C12orf49Q9H741 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.4□□□□□ -1.87
C12orf49Q9H741 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
C12orf49Q9H741 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
C12orf49Q9H741 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.39□□□□□ -1.87
C12orf49Q9H741 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.39□□□□□ -1.87
C12orf49Q9H741 AL356292.1-201ENST00000283110 373 ntBASIC3.39□□□□□ -1.87
C12orf49Q9H741 RNA5SP124-201ENST00000362739 110 ntBASIC3.39□□□□□ -1.87
C12orf49Q9H741 MIR613-201ENST00000385248 95 ntBASIC3.39□□□□□ -1.87
C12orf49Q9H741 RNU6-578P-201ENST00000390980 103 ntBASIC3.39□□□□□ -1.87
C12orf49Q9H741 U3.39-201ENST00000408569 239 ntBASIC3.39□□□□□ -1.87
C12orf49Q9H741 EBAG9P1-201ENST00000418955 543 ntBASIC3.39□□□□□ -1.87
C12orf49Q9H741 AL357134.1-201ENST00000445848 426 ntBASIC3.39□□□□□ -1.87
C12orf49Q9H741 RPL36AP21-201ENST00000490372 323 ntBASIC3.39□□□□□ -1.87
C12orf49Q9H741 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.39□□□□□ -1.87
C12orf49Q9H741 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.39□□□□□ -1.87
C12orf49Q9H741 SNORA4.4-201ENST00000515921 135 ntBASIC3.39□□□□□ -1.87
C12orf49Q9H741 RNU6-991P-201ENST00000516168 107 ntBASIC3.39□□□□□ -1.87
C12orf49Q9H741 RNU6-1007P-201ENST00000516586 107 ntBASIC3.39□□□□□ -1.87
C12orf49Q9H741 RNU7-116P-201ENST00000516940 62 ntBASIC3.39□□□□□ -1.87
C12orf49Q9H741 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.39□□□□□ -1.87
C12orf49Q9H741 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.39□□□□□ -1.87
C12orf49Q9H741 MIR4444-1-201ENST00000581696 74 ntBASIC3.39□□□□□ -1.87
C12orf49Q9H741 MIR3117-201ENST00000584034 78 ntBASIC3.39□□□□□ -1.87
C12orf49Q9H741 MIR4444-2-201ENST00000584390 74 ntBASIC3.39□□□□□ -1.87
C12orf49Q9H741 AC005972.2-201ENST00000604690 348 ntBASIC3.39□□□□□ -1.87
C12orf49Q9H741 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
C12orf49Q9H741 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
C12orf49Q9H741 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
C12orf49Q9H741 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
C12orf49Q9H741 RNU4-84P-201ENST00000364200 139 ntBASIC3.38□□□□□ -1.87
C12orf49Q9H741 RNU6-449P-201ENST00000383914 107 ntBASIC3.38□□□□□ -1.87
C12orf49Q9H741 Y_RNA.572-201ENST00000384757 98 ntBASIC3.38□□□□□ -1.87
C12orf49Q9H741 MIR561-201ENST00000385216 97 ntBASIC3.38□□□□□ -1.87
C12orf49Q9H741 RNU6-220P-201ENST00000390919 107 ntBASIC3.38□□□□□ -1.87
C12orf49Q9H741 Y_RNA.580-201ENST00000391004 95 ntBASIC3.38□□□□□ -1.87
C12orf49Q9H741 Z98941.1-201ENST00000407764 100 ntBASIC3.38□□□□□ -1.87
C12orf49Q9H741 SNORA36B-201ENST00000410438 131 ntBASIC3.38□□□□□ -1.87
C12orf49Q9H741 AC123900.1-201ENST00000420390 96 ntBASIC3.38□□□□□ -1.87
C12orf49Q9H741 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
C12orf49Q9H741 AL139247.1-201ENST00000422768 325 ntBASIC3.38□□□□□ -1.87
C12orf49Q9H741 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.38□□□□□ -1.87
C12orf49Q9H741 AL500522.2-201ENST00000448562 343 ntBASIC3.38□□□□□ -1.87
C12orf49Q9H741 RPS27P22-201ENST00000478056 241 ntBASIC3.38□□□□□ -1.87
C12orf49Q9H741 AC093259.1-201ENST00000509755 300 ntBASIC3.38□□□□□ -1.87
C12orf49Q9H741 MIR2114-201ENST00000516645 80 ntBASIC3.38□□□□□ -1.87
C12orf49Q9H741 SCARNA14-201ENST00000516903 136 ntBASIC3.38□□□□□ -1.87
C12orf49Q9H741 AL121772.2-201ENST00000614331 297 ntBASIC3.38□□□□□ -1.87
C12orf49Q9H741 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.38□□□□□ -1.87
C12orf49Q9H741 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.38□□□□□ -1.87
C12orf49Q9H741 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.38□□□□□ -1.87
C12orf49Q9H741 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.38□□□□□ -1.87
C12orf49Q9H741 TNPO1P3-201ENST00000436471 2662 ntBASIC3.38□□□□□ -1.87
C12orf49Q9H741 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.38□□□□□ -1.87
C12orf49Q9H741 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
C12orf49Q9H741 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.38□□□□□ -1.87
C12orf49Q9H741 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
C12orf49Q9H741 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
C12orf49Q9H741 RNU6-1180P-201ENST00000364935 107 ntBASIC3.37□□□□□ -1.87
C12orf49Q9H741 RNU6-1323P-201ENST00000384025 107 ntBASIC3.37□□□□□ -1.87
C12orf49Q9H741 MIR181A2-201ENST00000384863 110 ntBASIC3.37□□□□□ -1.87
C12orf49Q9H741 MIR199A2-201ENST00000385289 110 ntBASIC3.37□□□□□ -1.87
C12orf49Q9H741 MIR616-201ENST00000385293 97 ntBASIC3.37□□□□□ -1.87
C12orf49Q9H741 PTMAP2-201ENST00000397627 327 ntBASIC3.37□□□□□ -1.87
C12orf49Q9H741 RNA5SP306-201ENST00000411087 107 ntBASIC3.37□□□□□ -1.87
C12orf49Q9H741 AC016909.1-201ENST00000415916 166 ntBASIC3.37□□□□□ -1.87
C12orf49Q9H741 CR769767.1-201ENST00000436337 346 ntBASIC3.37□□□□□ -1.87
C12orf49Q9H741 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.37□□□□□ -1.87
C12orf49Q9H741 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.37□□□□□ -1.87
C12orf49Q9H741 POLR3GP1-201ENST00000594073 261 ntBASIC3.37□□□□□ -1.87
C12orf49Q9H741 AP003357.1-201ENST00000604497 148 ntBASIC3.37□□□□□ -1.87
C12orf49Q9H741 AC004832.5-201ENST00000608677 401 ntBASIC3.37□□□□□ -1.87
C12orf49Q9H741 AL391903.3-201ENST00000612158 163 ntBASIC3.37□□□□□ -1.87
C12orf49Q9H741 AC132825.6-201ENST00000638861 357 ntBASIC3.37□□□□□ -1.87
C12orf49Q9H741 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
C12orf49Q9H741 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
C12orf49Q9H741 CEP170P1-201ENST00000502249 4587 ntBASIC3.37□□□□□ -1.87
C12orf49Q9H741 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
C12orf49Q9H741 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.36□□□□□ -1.87
C12orf49Q9H741 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
C12orf49Q9H741 CENPCP1-201ENST00000533085 2578 ntBASIC3.36□□□□□ -1.87
C12orf49Q9H741 RNU4-13P-201ENST00000364019 141 ntBASIC3.36□□□□□ -1.87
C12orf49Q9H741 Y_RNA.332-201ENST00000365271 113 ntBASIC3.36□□□□□ -1.87
C12orf49Q9H741 RNU6-1130P-201ENST00000365434 107 ntBASIC3.36□□□□□ -1.87
C12orf49Q9H741 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
C12orf49Q9H741 AL135786.1-201ENST00000415892 214 ntBASIC3.36□□□□□ -1.87
C12orf49Q9H741 AL353705.1-201ENST00000433468 480 ntBASIC3.36□□□□□ -1.87
C12orf49Q9H741 AL445687.1-201ENST00000439946 251 ntBASIC3.36□□□□□ -1.87
C12orf49Q9H741 MTCO1P44-201ENST00000441935 243 ntBASIC3.36□□□□□ -1.87
C12orf49Q9H741 AC245047.8-201ENST00000456455 284 ntBASIC3.36□□□□□ -1.87
C12orf49Q9H741 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.36□□□□□ -1.87
C12orf49Q9H741 RNA5SP208-201ENST00000516156 78 ntBASIC3.36□□□□□ -1.87
C12orf49Q9H741 RNA5SP164-201ENST00000516533 110 ntBASIC3.36□□□□□ -1.87
C12orf49Q9H741 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.36□□□□□ -1.87
C12orf49Q9H741 AC127455.1-201ENST00000565496 145 ntBASIC3.36□□□□□ -1.87
C12orf49Q9H741 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.36□□□□□ -1.87
C12orf49Q9H741 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
C12orf49Q9H741 IPO8P1-201ENST00000455509 3109 ntBASIC3.36□□□□□ -1.87
C12orf49Q9H741 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
C12orf49Q9H741 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 1308 ms