Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 UBL5P2-201ENST00000583788 219 ntBASIC3.33□□□□□ -1.88
RNF38Q9H0F5 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.33□□□□□ -1.88
RNF38Q9H0F5 AL162274.2-201ENST00000614406 332 ntBASIC3.33□□□□□ -1.88
RNF38Q9H0F5 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.33□□□□□ -1.88
RNF38Q9H0F5 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.33□□□□□ -1.88
RNF38Q9H0F5 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.33□□□□□ -1.88
RNF38Q9H0F5 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.33□□□□□ -1.88
RNF38Q9H0F5 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.33□□□□□ -1.88
RNF38Q9H0F5 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
RNF38Q9H0F5 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.32□□□□□ -1.88
RNF38Q9H0F5 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF38Q9H0F5 RNU6-245P-201ENST00000384020 107 ntBASIC3.32□□□□□ -1.88
RNF38Q9H0F5 RNU6-22P-201ENST00000384355 107 ntBASIC3.32□□□□□ -1.88
RNF38Q9H0F5 SNORA40.19-201ENST00000390846 128 ntBASIC3.32□□□□□ -1.88
RNF38Q9H0F5 RNU6-763P-201ENST00000390865 106 ntBASIC3.32□□□□□ -1.88
RNF38Q9H0F5 CBX3P9-201ENST00000402326 552 ntBASIC3.32□□□□□ -1.88
RNF38Q9H0F5 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.32□□□□□ -1.88
RNF38Q9H0F5 Y_RNA.637-201ENST00000459424 114 ntBASIC3.32□□□□□ -1.88
RNF38Q9H0F5 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.32□□□□□ -1.88
RNF38Q9H0F5 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.32□□□□□ -1.88
RNF38Q9H0F5 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RNF38Q9H0F5 RNU5F-2P-201ENST00000516066 82 ntBASIC3.32□□□□□ -1.88
RNF38Q9H0F5 SCARNA17.1-201ENST00000516211 143 ntBASIC3.32□□□□□ -1.88
RNF38Q9H0F5 SCARNA17.2-201ENST00000516334 143 ntBASIC3.32□□□□□ -1.88
RNF38Q9H0F5 SNORD116-25-201ENST00000516517 92 ntBASIC3.32□□□□□ -1.88
RNF38Q9H0F5 RNA5SP380-201ENST00000517190 98 ntBASIC3.32□□□□□ -1.88
RNF38Q9H0F5 AC115990.1-201ENST00000526957 301 ntBASIC3.32□□□□□ -1.88
RNF38Q9H0F5 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.32□□□□□ -1.88
RNF38Q9H0F5 AC006380.1-201ENST00000603598 186 ntBASIC3.32□□□□□ -1.88
RNF38Q9H0F5 SCARNA17.4-201ENST00000614296 143 ntBASIC3.32□□□□□ -1.88
RNF38Q9H0F5 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
RNF38Q9H0F5 AC002543.1-201ENST00000299783 1954 ntBASIC3.32□□□□□ -1.88
RNF38Q9H0F5 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF38Q9H0F5 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RNF38Q9H0F5 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.31□□□□□ -1.88
RNF38Q9H0F5 MIR422A-201ENST00000362286 90 ntBASIC3.31□□□□□ -1.88
RNF38Q9H0F5 Y_RNA.357-201ENST00000365487 109 ntBASIC3.31□□□□□ -1.88
RNF38Q9H0F5 Y_RNA.400-201ENST00000383963 111 ntBASIC3.31□□□□□ -1.88
RNF38Q9H0F5 SNORA7.4-201ENST00000384249 137 ntBASIC3.31□□□□□ -1.88
RNF38Q9H0F5 MIR320B2-201ENST00000408479 138 ntBASIC3.31□□□□□ -1.88
RNF38Q9H0F5 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.31□□□□□ -1.88
RNF38Q9H0F5 AL162725.1-201ENST00000435405 301 ntBASIC3.31□□□□□ -1.88
RNF38Q9H0F5 AC009969.1-201ENST00000438726 172 ntBASIC3.31□□□□□ -1.88
RNF38Q9H0F5 U8.19-201ENST00000459095 133 ntBASIC3.31□□□□□ -1.88
RNF38Q9H0F5 RPL27AP5-201ENST00000469428 449 ntBASIC3.31□□□□□ -1.88
RNF38Q9H0F5 RPS27AP9-201ENST00000477681 438 ntBASIC3.31□□□□□ -1.88
RNF38Q9H0F5 RNU6-426P-201ENST00000516464 97 ntBASIC3.31□□□□□ -1.88
RNF38Q9H0F5 AC105137.2-201ENST00000569073 466 ntBASIC3.31□□□□□ -1.88
RNF38Q9H0F5 AC009127.3-201ENST00000570531 403 ntBASIC3.31□□□□□ -1.88
RNF38Q9H0F5 RPS15AP11-201ENST00000594193 385 ntBASIC3.31□□□□□ -1.88
RNF38Q9H0F5 AL034555.1-201ENST00000604816 211 ntBASIC3.31□□□□□ -1.88
RNF38Q9H0F5 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.31□□□□□ -1.88
RNF38Q9H0F5 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.31□□□□□ -1.88
RNF38Q9H0F5 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RNF38Q9H0F5 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
RNF38Q9H0F5 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RNF38Q9H0F5 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RNF38Q9H0F5 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RNF38Q9H0F5 RNU1-62P-201ENST00000362599 164 ntBASIC3.3□□□□□ -1.88
RNF38Q9H0F5 RNU6-151P-201ENST00000364158 107 ntBASIC3.3□□□□□ -1.88
RNF38Q9H0F5 Y_RNA.215-201ENST00000364204 112 ntBASIC3.3□□□□□ -1.88
RNF38Q9H0F5 SNORD87-201ENST00000364849 89 ntBASIC3.3□□□□□ -1.88
RNF38Q9H0F5 SNORD21-201ENST00000383953 95 ntBASIC3.3□□□□□ -1.88
RNF38Q9H0F5 RNU6-1083P-201ENST00000384022 107 ntBASIC3.3□□□□□ -1.88
RNF38Q9H0F5 RNU6-959P-201ENST00000384671 107 ntBASIC3.3□□□□□ -1.88
RNF38Q9H0F5 Y_RNA.568-201ENST00000384742 113 ntBASIC3.3□□□□□ -1.88
RNF38Q9H0F5 RNU6-1154P-201ENST00000391001 104 ntBASIC3.3□□□□□ -1.88
RNF38Q9H0F5 U3.40-201ENST00000408706 208 ntBASIC3.3□□□□□ -1.88
RNF38Q9H0F5 MIR1289-1-201ENST00000408836 144 ntBASIC3.3□□□□□ -1.88
RNF38Q9H0F5 RNU6-735P-201ENST00000410612 107 ntBASIC3.3□□□□□ -1.88
RNF38Q9H0F5 CST9LP2-201ENST00000437612 320 ntBASIC3.3□□□□□ -1.88
RNF38Q9H0F5 RPS20P10-201ENST00000451209 253 ntBASIC3.3□□□□□ -1.88
RNF38Q9H0F5 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.3□□□□□ -1.88
RNF38Q9H0F5 SEM1P1-201ENST00000506694 209 ntBASIC3.3□□□□□ -1.88
RNF38Q9H0F5 AC008885.1-201ENST00000514930 301 ntBASIC3.3□□□□□ -1.88
RNF38Q9H0F5 RNU6-436P-201ENST00000516171 114 ntBASIC3.3□□□□□ -1.88
RNF38Q9H0F5 RNU6-62P-201ENST00000516526 102 ntBASIC3.3□□□□□ -1.88
RNF38Q9H0F5 RNU1-117P-201ENST00000517041 158 ntBASIC3.3□□□□□ -1.88
RNF38Q9H0F5 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.3□□□□□ -1.88
RNF38Q9H0F5 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.3□□□□□ -1.88
RNF38Q9H0F5 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.3□□□□□ -1.88
RNF38Q9H0F5 MIR3923-201ENST00000579521 83 ntBASIC3.3□□□□□ -1.88
RNF38Q9H0F5 AL356575.1-201ENST00000603008 283 ntBASIC3.3□□□□□ -1.88
RNF38Q9H0F5 SNRPGP20-201ENST00000604477 205 ntBASIC3.3□□□□□ -1.88
RNF38Q9H0F5 uc_338.25-201ENST00000613756 156 ntBASIC3.3□□□□□ -1.88
RNF38Q9H0F5 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RNF38Q9H0F5 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
RNF38Q9H0F5 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.3□□□□□ -1.88
RNF38Q9H0F5 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
RNF38Q9H0F5 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RNF38Q9H0F5 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RNF38Q9H0F5 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RNF38Q9H0F5 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
RNF38Q9H0F5 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RNF38Q9H0F5 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
RNF38Q9H0F5 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RNF38Q9H0F5 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RNF38Q9H0F5 RNU1-75P-201ENST00000347264 129 ntBASIC3.29□□□□□ -1.88
RNF38Q9H0F5 Y_RNA.40-201ENST00000362645 93 ntBASIC3.29□□□□□ -1.88
RNF38Q9H0F5 RNU4-84P-201ENST00000364200 139 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms