Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.7□□□□□ -1.82
CNTNAP4Q9C0A0 MTND4LP9-201ENST00000427694 174 ntBASIC3.7□□□□□ -1.82
CNTNAP4Q9C0A0 RPS27AP9-201ENST00000477681 438 ntBASIC3.7□□□□□ -1.82
CNTNAP4Q9C0A0 AC090525.1-201ENST00000479116 478 ntBASIC3.7□□□□□ -1.82
CNTNAP4Q9C0A0 AIG1P1-201ENST00000503376 148 ntBASIC3.7□□□□□ -1.82
CNTNAP4Q9C0A0 SUMO2P18-201ENST00000518873 252 ntBASIC3.7□□□□□ -1.82
CNTNAP4Q9C0A0 AC006199.1-201ENST00000548728 219 ntBASIC3.7□□□□□ -1.82
CNTNAP4Q9C0A0 AC091544.4-201ENST00000555268 342 ntBASIC3.7□□□□□ -1.82
CNTNAP4Q9C0A0 AL078604.3-201ENST00000615580 211 ntBASIC3.7□□□□□ -1.82
CNTNAP4Q9C0A0 AC091932.3-201ENST00000624223 323 ntBASIC3.7□□□□□ -1.82
CNTNAP4Q9C0A0 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
CNTNAP4Q9C0A0 AC010332.2-201ENST00000613083 1904 ntBASIC3.7□□□□□ -1.82
CNTNAP4Q9C0A0 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CNTNAP4Q9C0A0 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CNTNAP4Q9C0A0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
CNTNAP4Q9C0A0 RNU4-84P-201ENST00000364200 139 ntBASIC3.7□□□□□ -1.82
CNTNAP4Q9C0A0 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.7□□□□□ -1.82
CNTNAP4Q9C0A0 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.7□□□□□ -1.82
CNTNAP4Q9C0A0 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.7□□□□□ -1.82
CNTNAP4Q9C0A0 AL137159.1-201ENST00000452808 512 ntBASIC3.7□□□□□ -1.82
CNTNAP4Q9C0A0 AC091179.3-201ENST00000474761 144 ntBASIC3.7□□□□□ -1.82
CNTNAP4Q9C0A0 HMGB3P3-201ENST00000510526 400 ntBASIC3.7□□□□□ -1.82
CNTNAP4Q9C0A0 SNORD19.2-201ENST00000516978 73 ntBASIC3.7□□□□□ -1.82
CNTNAP4Q9C0A0 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CNTNAP4Q9C0A0 AC105137.2-201ENST00000569073 466 ntBASIC3.7□□□□□ -1.82
CNTNAP4Q9C0A0 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.7□□□□□ -1.82
CNTNAP4Q9C0A0 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.7□□□□□ -1.82
CNTNAP4Q9C0A0 U7.8-201ENST00000619968 63 ntBASIC3.7□□□□□ -1.82
CNTNAP4Q9C0A0 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CNTNAP4Q9C0A0 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CNTNAP4Q9C0A0 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CNTNAP4Q9C0A0 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CNTNAP4Q9C0A0 AC110774.1-201ENST00000623567 2018 ntBASIC3.69□□□□□ -1.82
CNTNAP4Q9C0A0 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CNTNAP4Q9C0A0 RNU6-799P-201ENST00000363567 107 ntBASIC3.69□□□□□ -1.82
CNTNAP4Q9C0A0 RNU6-151P-201ENST00000364158 107 ntBASIC3.69□□□□□ -1.82
CNTNAP4Q9C0A0 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CNTNAP4Q9C0A0 EI24P2-201ENST00000397776 1076 ntBASIC3.69□□□□□ -1.82
CNTNAP4Q9C0A0 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.69□□□□□ -1.82
CNTNAP4Q9C0A0 SEPT7P4-201ENST00000437076 306 ntBASIC3.69□□□□□ -1.82
CNTNAP4Q9C0A0 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.69□□□□□ -1.82
CNTNAP4Q9C0A0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.69□□□□□ -1.82
CNTNAP4Q9C0A0 AL645939.1-201ENST00000453429 797 ntBASIC3.69□□□□□ -1.82
CNTNAP4Q9C0A0 HMGN1P18-201ENST00000457642 277 ntBASIC3.69□□□□□ -1.82
CNTNAP4Q9C0A0 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CNTNAP4Q9C0A0 RNU1-61P-201ENST00000516107 151 ntBASIC3.69□□□□□ -1.82
CNTNAP4Q9C0A0 Y_RNA.686-201ENST00000516548 134 ntBASIC3.69□□□□□ -1.82
CNTNAP4Q9C0A0 MIR3684-201ENST00000579779 74 ntBASIC3.69□□□□□ -1.82
CNTNAP4Q9C0A0 AL110115.1-201ENST00000614396 364 ntBASIC3.69□□□□□ -1.82
CNTNAP4Q9C0A0 Y_RNA.778-201ENST00000620203 90 ntBASIC3.69□□□□□ -1.82
CNTNAP4Q9C0A0 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.68□□□□□ -1.82
CNTNAP4Q9C0A0 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CNTNAP4Q9C0A0 PWAR6-201ENST00000552334 4618 ntBASIC3.68□□□□□ -1.82
CNTNAP4Q9C0A0 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CNTNAP4Q9C0A0 RNU4-17P-201ENST00000365598 141 ntBASIC3.68□□□□□ -1.82
CNTNAP4Q9C0A0 RNU6-1264P-201ENST00000383891 107 ntBASIC3.68□□□□□ -1.82
CNTNAP4Q9C0A0 Y_RNA.412-201ENST00000384001 104 ntBASIC3.68□□□□□ -1.82
CNTNAP4Q9C0A0 MIR9-1-201ENST00000385198 89 ntBASIC3.68□□□□□ -1.82
CNTNAP4Q9C0A0 AC096649.2-201ENST00000416186 393 ntBASIC3.68□□□□□ -1.82
CNTNAP4Q9C0A0 NDUFS5P3-201ENST00000450668 321 ntBASIC3.68□□□□□ -1.82
CNTNAP4Q9C0A0 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.68□□□□□ -1.82
CNTNAP4Q9C0A0 MIR4425-201ENST00000580572 84 ntBASIC3.68□□□□□ -1.82
CNTNAP4Q9C0A0 MIR3609-201ENST00000582661 80 ntBASIC3.68□□□□□ -1.82
CNTNAP4Q9C0A0 AL008718.3-201ENST00000610217 321 ntBASIC3.68□□□□□ -1.82
CNTNAP4Q9C0A0 AC004825.2-201ENST00000616634 455 ntBASIC3.68□□□□□ -1.82
CNTNAP4Q9C0A0 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.68□□□□□ -1.82
CNTNAP4Q9C0A0 MIR7843-201ENST00000622274 79 ntBASIC3.68□□□□□ -1.82
CNTNAP4Q9C0A0 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CNTNAP4Q9C0A0 AL133412.1-201ENST00000380194 2992 ntBASIC3.67□□□□□ -1.82
CNTNAP4Q9C0A0 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.67□□□□□ -1.82
CNTNAP4Q9C0A0 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
CNTNAP4Q9C0A0 RNU6-429P-201ENST00000384582 108 ntBASIC3.67□□□□□ -1.82
CNTNAP4Q9C0A0 SNORA40-201ENST00000388090 126 ntBASIC3.67□□□□□ -1.82
CNTNAP4Q9C0A0 RNY4P18-201ENST00000391107 89 ntBASIC3.67□□□□□ -1.82
CNTNAP4Q9C0A0 PTGES3P4-201ENST00000426243 356 ntBASIC3.67□□□□□ -1.82
CNTNAP4Q9C0A0 BTF3P11-201ENST00000426582 477 ntBASIC3.67□□□□□ -1.82
CNTNAP4Q9C0A0 AL441985.1-201ENST00000457727 251 ntBASIC3.67□□□□□ -1.82
CNTNAP4Q9C0A0 AC016925.1-201ENST00000458303 298 ntBASIC3.67□□□□□ -1.82
CNTNAP4Q9C0A0 AC010401.1-201ENST00000463867 348 ntBASIC3.67□□□□□ -1.82
CNTNAP4Q9C0A0 SNORA31.16-201ENST00000516773 139 ntBASIC3.67□□□□□ -1.82
CNTNAP4Q9C0A0 AP002001.1-203ENST00000534002 267 ntBASIC3.67□□□□□ -1.82
CNTNAP4Q9C0A0 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.67□□□□□ -1.82
CNTNAP4Q9C0A0 AC027176.1-201ENST00000560204 514 ntBASIC3.67□□□□□ -1.82
CNTNAP4Q9C0A0 AC092628.2-201ENST00000622492 339 ntBASIC3.67□□□□□ -1.82
CNTNAP4Q9C0A0 AC008873.1-201ENST00000625051 138 ntBASIC3.67□□□□□ -1.82
CNTNAP4Q9C0A0 SNORD98-201ENST00000636377 67 ntBASIC3.67□□□□□ -1.82
CNTNAP4Q9C0A0 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.66□□□□□ -1.82
CNTNAP4Q9C0A0 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CNTNAP4Q9C0A0 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CNTNAP4Q9C0A0 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CNTNAP4Q9C0A0 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CNTNAP4Q9C0A0 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CNTNAP4Q9C0A0 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CNTNAP4Q9C0A0 RNU6-859P-201ENST00000362728 107 ntBASIC3.66□□□□□ -1.82
CNTNAP4Q9C0A0 RNU6-270P-201ENST00000364131 105 ntBASIC3.66□□□□□ -1.82
CNTNAP4Q9C0A0 RNU6-748P-201ENST00000384648 107 ntBASIC3.66□□□□□ -1.82
CNTNAP4Q9C0A0 MIR208B-201ENST00000401172 77 ntBASIC3.66□□□□□ -1.82
CNTNAP4Q9C0A0 RNU6-710P-201ENST00000410424 105 ntBASIC3.66□□□□□ -1.82
CNTNAP4Q9C0A0 EBAG9P1-201ENST00000418955 543 ntBASIC3.66□□□□□ -1.82
CNTNAP4Q9C0A0 AL161651.1-201ENST00000440882 223 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms