Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 MIR186-201ENST00000384988 86 ntBASIC3.42□□□□□ -1.86
FOXP3Q9BZS1 SNORA48.2-201ENST00000390926 124 ntBASIC3.42□□□□□ -1.86
FOXP3Q9BZS1 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.42□□□□□ -1.86
FOXP3Q9BZS1 AC005326.1-201ENST00000429197 123 ntBASIC3.42□□□□□ -1.86
FOXP3Q9BZS1 AL353705.1-201ENST00000433468 480 ntBASIC3.42□□□□□ -1.86
FOXP3Q9BZS1 CST9LP2-201ENST00000437612 320 ntBASIC3.42□□□□□ -1.86
FOXP3Q9BZS1 AL135790.2-201ENST00000437701 267 ntBASIC3.42□□□□□ -1.86
FOXP3Q9BZS1 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.42□□□□□ -1.86
FOXP3Q9BZS1 AC115115.1-201ENST00000449927 248 ntBASIC3.42□□□□□ -1.86
FOXP3Q9BZS1 RBMY2UP-201ENST00000453474 324 ntBASIC3.42□□□□□ -1.86
FOXP3Q9BZS1 AC145146.1-201ENST00000496370 254 ntBASIC3.42□□□□□ -1.86
FOXP3Q9BZS1 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.42□□□□□ -1.86
FOXP3Q9BZS1 AC136628.3-201ENST00000521868 290 ntBASIC3.42□□□□□ -1.86
FOXP3Q9BZS1 uc_338.1-201ENST00000612113 180 ntBASIC3.42□□□□□ -1.86
FOXP3Q9BZS1 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
FOXP3Q9BZS1 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
FOXP3Q9BZS1 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
FOXP3Q9BZS1 RNU6-1210P-201ENST00000363775 107 ntBASIC3.41□□□□□ -1.86
FOXP3Q9BZS1 Y_RNA.182-201ENST00000363880 111 ntBASIC3.41□□□□□ -1.86
FOXP3Q9BZS1 Y_RNA.400-201ENST00000383963 111 ntBASIC3.41□□□□□ -1.86
FOXP3Q9BZS1 RNU6-1117P-201ENST00000384525 104 ntBASIC3.41□□□□□ -1.86
FOXP3Q9BZS1 MIR128-1-201ENST00000384921 82 ntBASIC3.41□□□□□ -1.86
FOXP3Q9BZS1 AL031003.1-201ENST00000404229 172 ntBASIC3.41□□□□□ -1.86
FOXP3Q9BZS1 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.41□□□□□ -1.86
FOXP3Q9BZS1 RNA5SP38-201ENST00000410750 119 ntBASIC3.41□□□□□ -1.86
FOXP3Q9BZS1 U8.19-201ENST00000459095 133 ntBASIC3.41□□□□□ -1.86
FOXP3Q9BZS1 FCF1P8-201ENST00000510322 597 ntBASIC3.41□□□□□ -1.86
FOXP3Q9BZS1 MIR5006-201ENST00000583027 110 ntBASIC3.41□□□□□ -1.86
FOXP3Q9BZS1 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
FOXP3Q9BZS1 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
FOXP3Q9BZS1 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.41□□□□□ -1.86
FOXP3Q9BZS1 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.4□□□□□ -1.86
FOXP3Q9BZS1 Y_RNA.243-201ENST00000364481 109 ntBASIC3.4□□□□□ -1.87
FOXP3Q9BZS1 Y_RNA.343-201ENST00000365354 112 ntBASIC3.4□□□□□ -1.87
FOXP3Q9BZS1 SNORA18.2-201ENST00000383865 132 ntBASIC3.4□□□□□ -1.87
FOXP3Q9BZS1 SNORD17-201ENST00000390930 237 ntBASIC3.4□□□□□ -1.87
FOXP3Q9BZS1 RNU6-381P-201ENST00000391259 108 ntBASIC3.4□□□□□ -1.87
FOXP3Q9BZS1 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.4□□□□□ -1.87
FOXP3Q9BZS1 TOMM22P2-201ENST00000430735 237 ntBASIC3.4□□□□□ -1.87
FOXP3Q9BZS1 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.4□□□□□ -1.87
FOXP3Q9BZS1 SNORD59.2-201ENST00000516873 68 ntBASIC3.4□□□□□ -1.87
FOXP3Q9BZS1 RNA5SP380-201ENST00000517190 98 ntBASIC3.4□□□□□ -1.87
FOXP3Q9BZS1 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.4□□□□□ -1.87
FOXP3Q9BZS1 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.4□□□□□ -1.87
FOXP3Q9BZS1 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.4□□□□□ -1.87
FOXP3Q9BZS1 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.4□□□□□ -1.87
FOXP3Q9BZS1 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.4□□□□□ -1.87
FOXP3Q9BZS1 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
FOXP3Q9BZS1 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
FOXP3Q9BZS1 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
FOXP3Q9BZS1 AL049781.1-201ENST00000623195 3585 ntBASIC3.39□□□□□ -1.87
FOXP3Q9BZS1 RNU6-655P-201ENST00000362858 107 ntBASIC3.39□□□□□ -1.87
FOXP3Q9BZS1 SNORA38.1-201ENST00000364172 131 ntBASIC3.39□□□□□ -1.87
FOXP3Q9BZS1 Y_RNA.357-201ENST00000365487 109 ntBASIC3.39□□□□□ -1.87
FOXP3Q9BZS1 SNORA67.2-201ENST00000384300 149 ntBASIC3.39□□□□□ -1.87
FOXP3Q9BZS1 Y_RNA.568-201ENST00000384742 113 ntBASIC3.39□□□□□ -1.87
FOXP3Q9BZS1 RNU1-101P-201ENST00000391171 127 ntBASIC3.39□□□□□ -1.87
FOXP3Q9BZS1 SNORA26.5-201ENST00000391215 123 ntBASIC3.39□□□□□ -1.87
FOXP3Q9BZS1 SEPT7P4-201ENST00000437076 306 ntBASIC3.39□□□□□ -1.87
FOXP3Q9BZS1 RPS29P2-201ENST00000479278 136 ntBASIC3.39□□□□□ -1.87
FOXP3Q9BZS1 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.39□□□□□ -1.87
FOXP3Q9BZS1 RNU2-44P-201ENST00000516795 194 ntBASIC3.39□□□□□ -1.87
FOXP3Q9BZS1 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.39□□□□□ -1.87
FOXP3Q9BZS1 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.39□□□□□ -1.87
FOXP3Q9BZS1 AC004832.5-201ENST00000608677 401 ntBASIC3.39□□□□□ -1.87
FOXP3Q9BZS1 AC013791.1-201ENST00000616619 62 ntBASIC3.39□□□□□ -1.87
FOXP3Q9BZS1 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.39□□□□□ -1.87
FOXP3Q9BZS1 RNU6-275P-201ENST00000364910 107 ntBASIC3.38□□□□□ -1.87
FOXP3Q9BZS1 Y_RNA.488-201ENST00000384403 102 ntBASIC3.38□□□□□ -1.87
FOXP3Q9BZS1 Y_RNA.497-201ENST00000384447 98 ntBASIC3.38□□□□□ -1.87
FOXP3Q9BZS1 RNU1-57P-201ENST00000384491 166 ntBASIC3.38□□□□□ -1.87
FOXP3Q9BZS1 RNU6-131P-201ENST00000391144 107 ntBASIC3.38□□□□□ -1.87
FOXP3Q9BZS1 RNU6-710P-201ENST00000410424 105 ntBASIC3.38□□□□□ -1.87
FOXP3Q9BZS1 AL162725.1-201ENST00000435405 301 ntBASIC3.38□□□□□ -1.87
FOXP3Q9BZS1 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.38□□□□□ -1.87
FOXP3Q9BZS1 AC146507.2-201ENST00000460608 476 ntBASIC3.38□□□□□ -1.87
FOXP3Q9BZS1 RN7SL807P-201ENST00000470923 297 ntBASIC3.38□□□□□ -1.87
FOXP3Q9BZS1 RNU1-117P-201ENST00000517041 158 ntBASIC3.38□□□□□ -1.87
FOXP3Q9BZS1 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.38□□□□□ -1.87
FOXP3Q9BZS1 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.38□□□□□ -1.87
FOXP3Q9BZS1 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.38□□□□□ -1.87
FOXP3Q9BZS1 AC025281.1-201ENST00000567026 265 ntBASIC3.38□□□□□ -1.87
FOXP3Q9BZS1 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
FOXP3Q9BZS1 AC026241.1-201ENST00000517873 2142 ntBASIC3.38□□□□□ -1.87
FOXP3Q9BZS1 AC010329.5-201ENST00000623497 2174 ntBASIC3.38□□□□□ -1.87
FOXP3Q9BZS1 AC069528.2-201ENST00000624849 1991 ntBASIC3.38□□□□□ -1.87
FOXP3Q9BZS1 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
FOXP3Q9BZS1 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
FOXP3Q9BZS1 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
FOXP3Q9BZS1 Y_RNA.361-201ENST00000365515 120 ntBASIC3.37□□□□□ -1.87
FOXP3Q9BZS1 RNU6-959P-201ENST00000384671 107 ntBASIC3.37□□□□□ -1.87
FOXP3Q9BZS1 RPL21P3-201ENST00000395517 478 ntBASIC3.37□□□□□ -1.87
FOXP3Q9BZS1 RNA5SP229-201ENST00000410809 99 ntBASIC3.37□□□□□ -1.87
FOXP3Q9BZS1 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.37□□□□□ -1.87
FOXP3Q9BZS1 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.37□□□□□ -1.87
FOXP3Q9BZS1 RPS20P10-201ENST00000451209 253 ntBASIC3.37□□□□□ -1.87
FOXP3Q9BZS1 RN7SKP164-201ENST00000516138 266 ntBASIC3.37□□□□□ -1.87
FOXP3Q9BZS1 AC079598.5-201ENST00000547460 117 ntBASIC3.37□□□□□ -1.87
FOXP3Q9BZS1 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.37□□□□□ -1.87
FOXP3Q9BZS1 MIR7112-201ENST00000616126 65 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms