Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 RNU6-130P-201ENST00000411112 103 ntBASIC2.66□□□□□ -1.98
TRIM54Q9BYV2 HMGN2P35-201ENST00000412164 270 ntBASIC2.66□□□□□ -1.98
TRIM54Q9BYV2 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
TRIM54Q9BYV2 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.66□□□□□ -1.98
TRIM54Q9BYV2 AC009238.1-201ENST00000442165 424 ntBASIC2.66□□□□□ -1.98
TRIM54Q9BYV2 AC009237.6-201ENST00000446969 424 ntBASIC2.66□□□□□ -1.98
TRIM54Q9BYV2 AC114982.1-201ENST00000469402 321 ntBASIC2.66□□□□□ -1.98
TRIM54Q9BYV2 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.66□□□□□ -1.98
TRIM54Q9BYV2 RNA5SP490-201ENST00000517141 136 ntBASIC2.66□□□□□ -1.98
TRIM54Q9BYV2 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.66□□□□□ -1.98
TRIM54Q9BYV2 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.66□□□□□ -1.98
TRIM54Q9BYV2 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.66□□□□□ -1.98
TRIM54Q9BYV2 MIR3124-201ENST00000582636 67 ntBASIC2.66□□□□□ -1.98
TRIM54Q9BYV2 MIR4753-201ENST00000585119 83 ntBASIC2.66□□□□□ -1.98
TRIM54Q9BYV2 MIR1248-201ENST00000629190 106 ntBASIC2.66□□□□□ -1.98
TRIM54Q9BYV2 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TRIM54Q9BYV2 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TRIM54Q9BYV2 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
TRIM54Q9BYV2 RNU6-770P-201ENST00000363929 105 ntBASIC2.65□□□□□ -1.99
TRIM54Q9BYV2 SNORD87-201ENST00000364849 89 ntBASIC2.65□□□□□ -1.99
TRIM54Q9BYV2 SNORD31B-201ENST00000364977 69 ntBASIC2.65□□□□□ -1.99
TRIM54Q9BYV2 Y_RNA.574-201ENST00000384766 95 ntBASIC2.65□□□□□ -1.99
TRIM54Q9BYV2 MIR586-201ENST00000385035 97 ntBASIC2.65□□□□□ -1.99
TRIM54Q9BYV2 RNU6-1109P-201ENST00000391187 107 ntBASIC2.65□□□□□ -1.99
TRIM54Q9BYV2 RPL21P1-201ENST00000399532 476 ntBASIC2.65□□□□□ -1.99
TRIM54Q9BYV2 MIR1283-1-201ENST00000408494 87 ntBASIC2.65□□□□□ -1.99
TRIM54Q9BYV2 RNA5SP21-201ENST00000410917 96 ntBASIC2.65□□□□□ -1.99
TRIM54Q9BYV2 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.65□□□□□ -1.99
TRIM54Q9BYV2 AL731563.1-201ENST00000442202 214 ntBASIC2.65□□□□□ -1.99
TRIM54Q9BYV2 RNU7-26P-201ENST00000458980 63 ntBASIC2.65□□□□□ -1.99
TRIM54Q9BYV2 AL049873.1-201ENST00000480540 376 ntBASIC2.65□□□□□ -1.99
TRIM54Q9BYV2 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.65□□□□□ -1.99
TRIM54Q9BYV2 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.65□□□□□ -1.99
TRIM54Q9BYV2 MTCO2P24-201ENST00000515611 426 ntBASIC2.65□□□□□ -1.99
TRIM54Q9BYV2 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.65□□□□□ -1.99
TRIM54Q9BYV2 MIR3670-2-201ENST00000582974 65 ntBASIC2.65□□□□□ -1.99
TRIM54Q9BYV2 MIR3670-1-201ENST00000584160 65 ntBASIC2.65□□□□□ -1.99
TRIM54Q9BYV2 MIR3670-3-201ENST00000584855 65 ntBASIC2.65□□□□□ -1.99
TRIM54Q9BYV2 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.65□□□□□ -1.99
TRIM54Q9BYV2 MIR3670-4-201ENST00000612260 65 ntBASIC2.65□□□□□ -1.99
TRIM54Q9BYV2 AC008873.1-201ENST00000625051 138 ntBASIC2.65□□□□□ -1.99
TRIM54Q9BYV2 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.65□□□□□ -1.99
TRIM54Q9BYV2 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
TRIM54Q9BYV2 AL365361.1-201ENST00000566942 3481 ntBASIC2.65□□□□□ -1.99
TRIM54Q9BYV2 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.65□□□□□ -1.99
TRIM54Q9BYV2 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
TRIM54Q9BYV2 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
TRIM54Q9BYV2 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.64□□□□□ -1.99
TRIM54Q9BYV2 AC135776.4-201ENST00000624300 1904 ntBASIC2.64□□□□□ -1.99
TRIM54Q9BYV2 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
TRIM54Q9BYV2 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
TRIM54Q9BYV2 RNU6-545P-201ENST00000362681 104 ntBASIC2.64□□□□□ -1.99
TRIM54Q9BYV2 Y_RNA.143-201ENST00000363520 106 ntBASIC2.64□□□□□ -1.99
TRIM54Q9BYV2 SNORA38-201ENST00000363946 132 ntBASIC2.64□□□□□ -1.99
TRIM54Q9BYV2 Y_RNA.214-201ENST00000364201 112 ntBASIC2.64□□□□□ -1.99
TRIM54Q9BYV2 SNORA72.2-201ENST00000365028 127 ntBASIC2.64□□□□□ -1.99
TRIM54Q9BYV2 SNORA25B-201ENST00000365507 128 ntBASIC2.64□□□□□ -1.99
TRIM54Q9BYV2 MIR128-1-201ENST00000384921 82 ntBASIC2.64□□□□□ -1.99
TRIM54Q9BYV2 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
TRIM54Q9BYV2 ELOCP20-201ENST00000422460 345 ntBASIC2.64□□□□□ -1.99
TRIM54Q9BYV2 MTCYBP9-201ENST00000431021 303 ntBASIC2.64□□□□□ -1.99
TRIM54Q9BYV2 RPL26P26-201ENST00000480251 434 ntBASIC2.64□□□□□ -1.99
TRIM54Q9BYV2 ATP5EP1-201ENST00000510257 156 ntBASIC2.64□□□□□ -1.99
TRIM54Q9BYV2 RPL23AP94-201ENST00000512518 302 ntBASIC2.64□□□□□ -1.99
TRIM54Q9BYV2 RNU6-667P-201ENST00000517186 102 ntBASIC2.64□□□□□ -1.99
TRIM54Q9BYV2 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.64□□□□□ -1.99
TRIM54Q9BYV2 AC004486.1-201ENST00000546846 233 ntBASIC2.64□□□□□ -1.99
TRIM54Q9BYV2 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.64□□□□□ -1.99
TRIM54Q9BYV2 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.64□□□□□ -1.99
TRIM54Q9BYV2 MIR376A1-201ENST00000616574 68 ntBASIC2.64□□□□□ -1.99
TRIM54Q9BYV2 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.64□□□□□ -1.99
TRIM54Q9BYV2 AL137790.1-201ENST00000634283 177 ntBASIC2.64□□□□□ -1.99
TRIM54Q9BYV2 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
TRIM54Q9BYV2 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
TRIM54Q9BYV2 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
TRIM54Q9BYV2 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.63□□□□□ -1.99
TRIM54Q9BYV2 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.63□□□□□ -1.99
TRIM54Q9BYV2 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.63□□□□□ -1.99
TRIM54Q9BYV2 Y_RNA.19-201ENST00000362462 99 ntBASIC2.63□□□□□ -1.99
TRIM54Q9BYV2 Y_RNA.47-201ENST00000362697 108 ntBASIC2.63□□□□□ -1.99
TRIM54Q9BYV2 U3.8-201ENST00000363675 217 ntBASIC2.63□□□□□ -1.99
TRIM54Q9BYV2 RNU6-1310P-201ENST00000384153 107 ntBASIC2.63□□□□□ -1.99
TRIM54Q9BYV2 RNA5SP504-201ENST00000410676 117 ntBASIC2.63□□□□□ -1.99
TRIM54Q9BYV2 RAB28P5-201ENST00000427490 651 ntBASIC2.63□□□□□ -1.99
TRIM54Q9BYV2 DYNLT3P2-201ENST00000442517 295 ntBASIC2.63□□□□□ -1.99
TRIM54Q9BYV2 AL135938.1-201ENST00000443141 297 ntBASIC2.63□□□□□ -1.99
TRIM54Q9BYV2 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.63□□□□□ -1.99
TRIM54Q9BYV2 AP001486.1-201ENST00000463339 476 ntBASIC2.63□□□□□ -1.99
TRIM54Q9BYV2 UBE2DNL-203ENST00000474922 222 ntBASIC2.63□□□□□ -1.99
TRIM54Q9BYV2 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.63□□□□□ -1.99
TRIM54Q9BYV2 ELOCP29-201ENST00000588193 334 ntBASIC2.63□□□□□ -1.99
TRIM54Q9BYV2 AC005176.2-201ENST00000596933 147 ntBASIC2.63□□□□□ -1.99
TRIM54Q9BYV2 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.63□□□□□ -1.99
TRIM54Q9BYV2 MIR6852-201ENST00000621699 66 ntBASIC2.63□□□□□ -1.99
TRIM54Q9BYV2 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.63□□□□□ -1.99
TRIM54Q9BYV2 LINC02555-201ENST00000563933 1951 ntBASIC2.63□□□□□ -1.99
TRIM54Q9BYV2 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.63□□□□□ -1.99
TRIM54Q9BYV2 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
TRIM54Q9BYV2 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
TRIM54Q9BYV2 RNU6-626P-201ENST00000363354 107 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms