Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
COL25A1Q9BXS0 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL25A1Q9BXS0 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
COL25A1Q9BXS0 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL25A1Q9BXS0 RNA5SP307-201ENST00000362863 116 ntBASIC3.96□□□□□ -1.78
COL25A1Q9BXS0 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.96□□□□□ -1.78
COL25A1Q9BXS0 MIR1185-2-201ENST00000408687 86 ntBASIC3.96□□□□□ -1.78
COL25A1Q9BXS0 MIR1179-201ENST00000408703 91 ntBASIC3.96□□□□□ -1.78
COL25A1Q9BXS0 RNU6-857P-201ENST00000515893 110 ntBASIC3.96□□□□□ -1.78
COL25A1Q9BXS0 ACA59.2-201ENST00000517061 156 ntBASIC3.96□□□□□ -1.78
COL25A1Q9BXS0 IGLL4P-201ENST00000614590 133 ntBASIC3.96□□□□□ -1.78
COL25A1Q9BXS0 AC091905.2-201ENST00000623143 306 ntBASIC3.96□□□□□ -1.78
COL25A1Q9BXS0 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.96□□□□□ -1.78
COL25A1Q9BXS0 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL25A1Q9BXS0 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL25A1Q9BXS0 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
COL25A1Q9BXS0 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
COL25A1Q9BXS0 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
COL25A1Q9BXS0 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL25A1Q9BXS0 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.95□□□□□ -1.78
COL25A1Q9BXS0 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL25A1Q9BXS0 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL25A1Q9BXS0 AL356292.1-201ENST00000283110 373 ntBASIC3.95□□□□□ -1.78
COL25A1Q9BXS0 SNORA27.1-201ENST00000362604 124 ntBASIC3.95□□□□□ -1.78
COL25A1Q9BXS0 RNU4-15P-201ENST00000362613 141 ntBASIC3.95□□□□□ -1.78
COL25A1Q9BXS0 AL513477.1-202ENST00000417061 214 ntBASIC3.95□□□□□ -1.78
COL25A1Q9BXS0 TOMM22P1-201ENST00000418578 312 ntBASIC3.95□□□□□ -1.78
COL25A1Q9BXS0 HMGN2P10-201ENST00000448085 265 ntBASIC3.95□□□□□ -1.78
COL25A1Q9BXS0 SNORD11-201ENST00000459124 84 ntBASIC3.95□□□□□ -1.78
COL25A1Q9BXS0 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.95□□□□□ -1.78
COL25A1Q9BXS0 AC011406.1-201ENST00000512440 370 ntBASIC3.95□□□□□ -1.78
COL25A1Q9BXS0 AC091826.1-201ENST00000514065 313 ntBASIC3.95□□□□□ -1.78
COL25A1Q9BXS0 RNU2-13P-201ENST00000515909 113 ntBASIC3.95□□□□□ -1.78
COL25A1Q9BXS0 RNU6-830P-201ENST00000516353 107 ntBASIC3.95□□□□□ -1.78
COL25A1Q9BXS0 AL137790.1-201ENST00000634283 177 ntBASIC3.95□□□□□ -1.78
COL25A1Q9BXS0 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
COL25A1Q9BXS0 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
COL25A1Q9BXS0 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
COL25A1Q9BXS0 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.95□□□□□ -1.78
COL25A1Q9BXS0 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL25A1Q9BXS0 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
COL25A1Q9BXS0 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.94□□□□□ -1.78
COL25A1Q9BXS0 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL25A1Q9BXS0 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
COL25A1Q9BXS0 AC092435.4-201ENST00000623012 4159 ntBASIC3.94□□□□□ -1.78
COL25A1Q9BXS0 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
COL25A1Q9BXS0 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL25A1Q9BXS0 Y_RNA.73-201ENST00000362910 113 ntBASIC3.94□□□□□ -1.78
COL25A1Q9BXS0 RNA5SP399-201ENST00000364003 117 ntBASIC3.94□□□□□ -1.78
COL25A1Q9BXS0 Y_RNA.290-201ENST00000364879 114 ntBASIC3.94□□□□□ -1.78
COL25A1Q9BXS0 SNORA1-201ENST00000384107 130 ntBASIC3.94□□□□□ -1.78
COL25A1Q9BXS0 MIR504-201ENST00000385065 83 ntBASIC3.94□□□□□ -1.78
COL25A1Q9BXS0 AL117342.1-201ENST00000404861 406 ntBASIC3.94□□□□□ -1.78
COL25A1Q9BXS0 AC107083.1-201ENST00000439643 279 ntBASIC3.94□□□□□ -1.78
COL25A1Q9BXS0 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.94□□□□□ -1.78
COL25A1Q9BXS0 AL645939.1-201ENST00000453429 797 ntBASIC3.94□□□□□ -1.78
COL25A1Q9BXS0 AC023449.1-201ENST00000454464 154 ntBASIC3.94□□□□□ -1.78
COL25A1Q9BXS0 RNU6-126P-201ENST00000516685 103 ntBASIC3.94□□□□□ -1.78
COL25A1Q9BXS0 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.94□□□□□ -1.78
COL25A1Q9BXS0 RPL23AP91-201ENST00000569211 455 ntBASIC3.94□□□□□ -1.78
COL25A1Q9BXS0 MIR5680-201ENST00000577577 84 ntBASIC3.94□□□□□ -1.78
COL25A1Q9BXS0 MIR4425-201ENST00000580572 84 ntBASIC3.94□□□□□ -1.78
COL25A1Q9BXS0 MIR3129-201ENST00000581095 76 ntBASIC3.94□□□□□ -1.78
COL25A1Q9BXS0 MIR3162-201ENST00000581818 82 ntBASIC3.94□□□□□ -1.78
COL25A1Q9BXS0 MIR4435-1-201ENST00000582552 80 ntBASIC3.94□□□□□ -1.78
COL25A1Q9BXS0 AC107294.3-201ENST00000609211 526 ntBASIC3.94□□□□□ -1.78
COL25A1Q9BXS0 Pinc.1-201ENST00000616452 154 ntBASIC3.94□□□□□ -1.78
COL25A1Q9BXS0 AC002064.3-201ENST00000623448 346 ntBASIC3.94□□□□□ -1.78
COL25A1Q9BXS0 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
COL25A1Q9BXS0 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.93□□□□□ -1.78
COL25A1Q9BXS0 MFSD8-236ENST00000641509 4050 ntBASIC3.93□□□□□ -1.78
COL25A1Q9BXS0 RNU6-414P-201ENST00000363705 104 ntBASIC3.93□□□□□ -1.78
COL25A1Q9BXS0 SNORA63D-201ENST00000364359 132 ntBASIC3.93□□□□□ -1.78
COL25A1Q9BXS0 RNU6-335P-201ENST00000364563 113 ntBASIC3.93□□□□□ -1.78
COL25A1Q9BXS0 RNU6-1138P-201ENST00000365359 106 ntBASIC3.93□□□□□ -1.78
COL25A1Q9BXS0 Y_RNA.486-201ENST00000384398 107 ntBASIC3.93□□□□□ -1.78
COL25A1Q9BXS0 RNU6-1197P-201ENST00000391183 107 ntBASIC3.93□□□□□ -1.78
COL25A1Q9BXS0 RBMY2UP-201ENST00000453474 324 ntBASIC3.93□□□□□ -1.78
COL25A1Q9BXS0 snoU13.4-201ENST00000458916 104 ntBASIC3.93□□□□□ -1.78
COL25A1Q9BXS0 TRBV12-1-201ENST00000479785 344 ntBASIC3.93□□□□□ -1.78
COL25A1Q9BXS0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.93□□□□□ -1.78
COL25A1Q9BXS0 AC005921.1-201ENST00000510589 286 ntBASIC3.93□□□□□ -1.78
COL25A1Q9BXS0 AC019288.1-201ENST00000557918 224 ntBASIC3.93□□□□□ -1.78
COL25A1Q9BXS0 AL929325.1-201ENST00000603096 117 ntBASIC3.93□□□□□ -1.78
COL25A1Q9BXS0 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.93□□□□□ -1.78
COL25A1Q9BXS0 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL25A1Q9BXS0 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.92□□□□□ -1.78
COL25A1Q9BXS0 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
COL25A1Q9BXS0 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.92□□□□□ -1.78
COL25A1Q9BXS0 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.92□□□□□ -1.78
COL25A1Q9BXS0 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
COL25A1Q9BXS0 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL25A1Q9BXS0 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL25A1Q9BXS0 SNORD35B-201ENST00000363660 87 ntBASIC3.92□□□□□ -1.78
COL25A1Q9BXS0 RNU6-271P-201ENST00000363858 105 ntBASIC3.92□□□□□ -1.78
COL25A1Q9BXS0 RNU6-1292P-201ENST00000383856 107 ntBASIC3.92□□□□□ -1.78
COL25A1Q9BXS0 MIR586-201ENST00000385035 97 ntBASIC3.92□□□□□ -1.78
COL25A1Q9BXS0 SNORD66.1-201ENST00000391230 76 ntBASIC3.92□□□□□ -1.78
COL25A1Q9BXS0 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.92□□□□□ -1.78
COL25A1Q9BXS0 NDUFB4P6-201ENST00000436819 366 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms