Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.52□□□□□ -2.01
PAAF1Q9BRP4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.52□□□□□ -2.01
PAAF1Q9BRP4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.52□□□□□ -2.01
PAAF1Q9BRP4 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
PAAF1Q9BRP4 MTND5P35-201ENST00000557537 1720 ntBASIC2.51□□□□□ -2.01
PAAF1Q9BRP4 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.51□□□□□ -2.01
PAAF1Q9BRP4 MIR21-201ENST00000362134 72 ntBASIC2.51□□□□□ -2.01
PAAF1Q9BRP4 RNU1-62P-201ENST00000362599 164 ntBASIC2.51□□□□□ -2.01
PAAF1Q9BRP4 RNU1-76P-201ENST00000362903 159 ntBASIC2.51□□□□□ -2.01
PAAF1Q9BRP4 RNU6-438P-201ENST00000365561 103 ntBASIC2.51□□□□□ -2.01
PAAF1Q9BRP4 Y_RNA.455-201ENST00000384230 98 ntBASIC2.51□□□□□ -2.01
PAAF1Q9BRP4 SNORA26.7-201ENST00000391288 122 ntBASIC2.51□□□□□ -2.01
PAAF1Q9BRP4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.51□□□□□ -2.01
PAAF1Q9BRP4 RNA5SP425-201ENST00000410336 112 ntBASIC2.51□□□□□ -2.01
PAAF1Q9BRP4 SNORD12B-201ENST00000410433 91 ntBASIC2.51□□□□□ -2.01
PAAF1Q9BRP4 RNA5SP344-201ENST00000411081 104 ntBASIC2.51□□□□□ -2.01
PAAF1Q9BRP4 RNA5SP492-201ENST00000411330 114 ntBASIC2.51□□□□□ -2.01
PAAF1Q9BRP4 RPL19P1-201ENST00000411635 428 ntBASIC2.51□□□□□ -2.01
PAAF1Q9BRP4 AC018634.1-201ENST00000437554 401 ntBASIC2.51□□□□□ -2.01
PAAF1Q9BRP4 AC009238.1-201ENST00000442165 424 ntBASIC2.51□□□□□ -2.01
PAAF1Q9BRP4 AC009237.6-201ENST00000446969 424 ntBASIC2.51□□□□□ -2.01
PAAF1Q9BRP4 AC093852.1-201ENST00000503587 266 ntBASIC2.51□□□□□ -2.01
PAAF1Q9BRP4 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.51□□□□□ -2.01
PAAF1Q9BRP4 RN7SKP49-201ENST00000516675 260 ntBASIC2.51□□□□□ -2.01
PAAF1Q9BRP4 RPPH1-2P-201ENST00000516688 293 ntBASIC2.51□□□□□ -2.01
PAAF1Q9BRP4 AC008737.2-201ENST00000599446 118 ntBASIC2.51□□□□□ -2.01
PAAF1Q9BRP4 SNORD11B-201ENST00000607707 90 ntBASIC2.51□□□□□ -2.01
PAAF1Q9BRP4 AC067747.1-201ENST00000608026 250 ntBASIC2.51□□□□□ -2.01
PAAF1Q9BRP4 PART1_1.1-201ENST00000611761 217 ntBASIC2.51□□□□□ -2.01
PAAF1Q9BRP4 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.51□□□□□ -2.01
PAAF1Q9BRP4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PAAF1Q9BRP4 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PAAF1Q9BRP4 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.5□□□□□ -2.01
PAAF1Q9BRP4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.5□□□□□ -2.01
PAAF1Q9BRP4 Y_RNA.471-201ENST00000384312 102 ntBASIC2.5□□□□□ -2.01
PAAF1Q9BRP4 MIR329-1-201ENST00000385028 80 ntBASIC2.5□□□□□ -2.01
PAAF1Q9BRP4 RNA5SP213-201ENST00000391031 106 ntBASIC2.5□□□□□ -2.01
PAAF1Q9BRP4 RNU6-823P-201ENST00000391042 103 ntBASIC2.5□□□□□ -2.01
PAAF1Q9BRP4 AL357139.1-201ENST00000407792 426 ntBASIC2.5□□□□□ -2.01
PAAF1Q9BRP4 AC113618.1-201ENST00000416747 285 ntBASIC2.5□□□□□ -2.01
PAAF1Q9BRP4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.5□□□□□ -2.01
PAAF1Q9BRP4 UQCRBP2-201ENST00000447827 297 ntBASIC2.5□□□□□ -2.01
PAAF1Q9BRP4 FCF1P4-201ENST00000448326 183 ntBASIC2.5□□□□□ -2.01
PAAF1Q9BRP4 RNU6-1137P-201ENST00000517073 99 ntBASIC2.5□□□□□ -2.01
PAAF1Q9BRP4 DEFB131C-201ENST00000528817 165 ntBASIC2.5□□□□□ -2.01
PAAF1Q9BRP4 MZT1P2-201ENST00000604387 248 ntBASIC2.5□□□□□ -2.01
PAAF1Q9BRP4 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.5□□□□□ -2.01
PAAF1Q9BRP4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
PAAF1Q9BRP4 RNU6-318P-201ENST00000384283 103 ntBASIC2.49□□□□□ -2.01
PAAF1Q9BRP4 RNU6-985P-201ENST00000410182 104 ntBASIC2.49□□□□□ -2.01
PAAF1Q9BRP4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.49□□□□□ -2.01
PAAF1Q9BRP4 RPS15AP28-201ENST00000435088 386 ntBASIC2.49□□□□□ -2.01
PAAF1Q9BRP4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.49□□□□□ -2.01
PAAF1Q9BRP4 PCNPP5-201ENST00000452246 481 ntBASIC2.49□□□□□ -2.01
PAAF1Q9BRP4 AC091179.3-201ENST00000474761 144 ntBASIC2.49□□□□□ -2.01
PAAF1Q9BRP4 RNU6-344P-201ENST00000516635 111 ntBASIC2.49□□□□□ -2.01
PAAF1Q9BRP4 RNU6-107P-201ENST00000516643 102 ntBASIC2.49□□□□□ -2.01
PAAF1Q9BRP4 RNA5SP490-201ENST00000517141 136 ntBASIC2.49□□□□□ -2.01
PAAF1Q9BRP4 CYCSP23-201ENST00000519781 313 ntBASIC2.49□□□□□ -2.01
PAAF1Q9BRP4 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.49□□□□□ -2.01
PAAF1Q9BRP4 U4atac.1-201ENST00000618345 95 ntBASIC2.49□□□□□ -2.01
PAAF1Q9BRP4 MIR1248-201ENST00000629190 106 ntBASIC2.49□□□□□ -2.01
PAAF1Q9BRP4 U6.92-201ENST00000636464 89 ntBASIC2.49□□□□□ -2.01
PAAF1Q9BRP4 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
PAAF1Q9BRP4 AP006437.1-201ENST00000641440 3685 ntBASIC2.48□□□□□ -2.01
PAAF1Q9BRP4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
PAAF1Q9BRP4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.48□□□□□ -2.01
PAAF1Q9BRP4 RNU6-1145P-201ENST00000384246 107 ntBASIC2.48□□□□□ -2.01
PAAF1Q9BRP4 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.48□□□□□ -2.01
PAAF1Q9BRP4 DPH3P2-201ENST00000422618 250 ntBASIC2.48□□□□□ -2.01
PAAF1Q9BRP4 MTND2P23-201ENST00000422990 651 ntBASIC2.48□□□□□ -2.01
PAAF1Q9BRP4 IFNA11P-201ENST00000446352 526 ntBASIC2.48□□□□□ -2.01
PAAF1Q9BRP4 AC007395.1-201ENST00000451333 677 ntBASIC2.48□□□□□ -2.01
PAAF1Q9BRP4 Y_RNA.715-201ENST00000517082 110 ntBASIC2.48□□□□□ -2.01
PAAF1Q9BRP4 Y_RNA.720-201ENST00000517166 92 ntBASIC2.48□□□□□ -2.01
PAAF1Q9BRP4 RNU6-667P-201ENST00000517186 102 ntBASIC2.48□□□□□ -2.01
PAAF1Q9BRP4 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.48□□□□□ -2.01
PAAF1Q9BRP4 RRN3P3-201ENST00000549207 578 ntBASIC2.48□□□□□ -2.01
PAAF1Q9BRP4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.48□□□□□ -2.01
PAAF1Q9BRP4 MIR4648-201ENST00000580107 72 ntBASIC2.48□□□□□ -2.01
PAAF1Q9BRP4 MIR4753-201ENST00000585119 83 ntBASIC2.48□□□□□ -2.01
PAAF1Q9BRP4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PAAF1Q9BRP4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.47□□□□□ -2.01
PAAF1Q9BRP4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.47□□□□□ -2.01
PAAF1Q9BRP4 Y_RNA.145-201ENST00000363527 102 ntBASIC2.47□□□□□ -2.01
PAAF1Q9BRP4 Y_RNA.152-201ENST00000363578 100 ntBASIC2.47□□□□□ -2.01
PAAF1Q9BRP4 RNU6-1305P-201ENST00000364353 104 ntBASIC2.47□□□□□ -2.01
PAAF1Q9BRP4 SNORA63C-201ENST00000364578 129 ntBASIC2.47□□□□□ -2.01
PAAF1Q9BRP4 RNU1-91P-201ENST00000364746 163 ntBASIC2.47□□□□□ -2.01
PAAF1Q9BRP4 SNORA25B-201ENST00000365507 128 ntBASIC2.47□□□□□ -2.01
PAAF1Q9BRP4 SNORA63.7-201ENST00000365579 123 ntBASIC2.47□□□□□ -2.01
PAAF1Q9BRP4 RNU1-109P-201ENST00000383960 147 ntBASIC2.47□□□□□ -2.01
PAAF1Q9BRP4 Y_RNA.459-201ENST00000384251 102 ntBASIC2.47□□□□□ -2.01
PAAF1Q9BRP4 RNU6-738P-201ENST00000384531 106 ntBASIC2.47□□□□□ -2.01
PAAF1Q9BRP4 Y_RNA.551-201ENST00000384661 102 ntBASIC2.47□□□□□ -2.01
PAAF1Q9BRP4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.47□□□□□ -2.01
PAAF1Q9BRP4 SDAD1P3-201ENST00000427380 333 ntBASIC2.47□□□□□ -2.01
PAAF1Q9BRP4 AL356320.1-201ENST00000429616 163 ntBASIC2.47□□□□□ -2.01
PAAF1Q9BRP4 U8.20-201ENST00000459445 131 ntBASIC2.47□□□□□ -2.01
PAAF1Q9BRP4 AC010469.2-201ENST00000496412 480 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms