Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC242852.1-201ENST00000612151 96 ntBASIC4.02□□□□□ -1.77
USB1Q9BQ65 AC244015.1-201ENST00000622301 99 ntBASIC4.02□□□□□ -1.77
USB1Q9BQ65 MIR376A2-201ENST00000636782 80 ntBASIC4.02□□□□□ -1.77
USB1Q9BQ65 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
USB1Q9BQ65 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
USB1Q9BQ65 MFSD8-236ENST00000641509 4050 ntBASIC4.02□□□□□ -1.77
USB1Q9BQ65 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
USB1Q9BQ65 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.02□□□□□ -1.77
USB1Q9BQ65 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
USB1Q9BQ65 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
USB1Q9BQ65 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
USB1Q9BQ65 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.01□□□□□ -1.77
USB1Q9BQ65 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.01□□□□□ -1.77
USB1Q9BQ65 MAPK10-253ENST00000641010 4072 ntBASIC4.01□□□□□ -1.77
USB1Q9BQ65 RNU1-105P-201ENST00000363470 161 ntBASIC4.01□□□□□ -1.77
USB1Q9BQ65 Y_RNA.242-201ENST00000364473 110 ntBASIC4.01□□□□□ -1.77
USB1Q9BQ65 RNU6-690P-201ENST00000365242 106 ntBASIC4.01□□□□□ -1.77
USB1Q9BQ65 RN7SKP156-201ENST00000410308 342 ntBASIC4.01□□□□□ -1.77
USB1Q9BQ65 RPL18P10-201ENST00000425606 538 ntBASIC4.01□□□□□ -1.77
USB1Q9BQ65 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.01□□□□□ -1.77
USB1Q9BQ65 RN7SL810P-201ENST00000493031 276 ntBASIC4.01□□□□□ -1.77
USB1Q9BQ65 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC4.01□□□□□ -1.77
USB1Q9BQ65 RNU6-1146P-201ENST00000516282 102 ntBASIC4.01□□□□□ -1.77
USB1Q9BQ65 MIR2114-201ENST00000516645 80 ntBASIC4.01□□□□□ -1.77
USB1Q9BQ65 AP001781.1-201ENST00000530977 207 ntBASIC4.01□□□□□ -1.77
USB1Q9BQ65 TVP23BP1-201ENST00000557500 617 ntBASIC4.01□□□□□ -1.77
USB1Q9BQ65 AC105129.1-201ENST00000560250 297 ntBASIC4.01□□□□□ -1.77
USB1Q9BQ65 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
USB1Q9BQ65 MIR1248-201ENST00000629190 106 ntBASIC4.01□□□□□ -1.77
USB1Q9BQ65 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
USB1Q9BQ65 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.01□□□□□ -1.77
USB1Q9BQ65 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
USB1Q9BQ65 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
USB1Q9BQ65 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.01□□□□□ -1.77
USB1Q9BQ65 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
USB1Q9BQ65 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4□□□□□ -1.77
USB1Q9BQ65 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4□□□□□ -1.77
USB1Q9BQ65 Z82217.1-201ENST00000625157 8149 ntBASIC4□□□□□ -1.77
USB1Q9BQ65 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
USB1Q9BQ65 MIR518F-201ENST00000384973 87 ntBASIC4□□□□□ -1.77
USB1Q9BQ65 RPL21P65-201ENST00000406094 466 ntBASIC4□□□□□ -1.77
USB1Q9BQ65 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4□□□□□ -1.77
USB1Q9BQ65 AL031183.1-201ENST00000457667 207 ntBASIC4□□□□□ -1.77
USB1Q9BQ65 SNORA4.4-201ENST00000515921 135 ntBASIC4□□□□□ -1.77
USB1Q9BQ65 RNU6ATAC17P-201ENST00000516074 71 ntBASIC4□□□□□ -1.77
USB1Q9BQ65 RNU6-904P-201ENST00000516206 101 ntBASIC4□□□□□ -1.77
USB1Q9BQ65 IGLVIV-65-201ENST00000517313 360 ntBASIC4□□□□□ -1.77
USB1Q9BQ65 AC084364.2-201ENST00000546924 395 ntBASIC4□□□□□ -1.77
USB1Q9BQ65 AC008745.1-201ENST00000604064 271 ntBASIC4□□□□□ -1.77
USB1Q9BQ65 AC022217.4-201ENST00000604389 163 ntBASIC4□□□□□ -1.77
USB1Q9BQ65 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC4□□□□□ -1.77
USB1Q9BQ65 MIR7703-201ENST00000620784 77 ntBASIC4□□□□□ -1.77
USB1Q9BQ65 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4□□□□□ -1.77
USB1Q9BQ65 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4□□□□□ -1.77
USB1Q9BQ65 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
USB1Q9BQ65 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
USB1Q9BQ65 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
USB1Q9BQ65 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
USB1Q9BQ65 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
USB1Q9BQ65 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.99□□□□□ -1.77
USB1Q9BQ65 RNA5SP388-201ENST00000362584 119 ntBASIC3.99□□□□□ -1.77
USB1Q9BQ65 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
USB1Q9BQ65 MIR921-201ENST00000401133 56 ntBASIC3.99□□□□□ -1.77
USB1Q9BQ65 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.99□□□□□ -1.77
USB1Q9BQ65 AP001486.1-201ENST00000463339 476 ntBASIC3.99□□□□□ -1.77
USB1Q9BQ65 RN7SL459P-201ENST00000481078 302 ntBASIC3.99□□□□□ -1.77
USB1Q9BQ65 AP003730.1-201ENST00000524605 285 ntBASIC3.99□□□□□ -1.77
USB1Q9BQ65 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.99□□□□□ -1.77
USB1Q9BQ65 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.99□□□□□ -1.77
USB1Q9BQ65 AC020914.4-201ENST00000597690 277 ntBASIC3.99□□□□□ -1.77
USB1Q9BQ65 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
USB1Q9BQ65 U2.20-201ENST00000613956 192 ntBASIC3.99□□□□□ -1.77
USB1Q9BQ65 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
USB1Q9BQ65 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.99□□□□□ -1.77
USB1Q9BQ65 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
USB1Q9BQ65 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
USB1Q9BQ65 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
USB1Q9BQ65 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
USB1Q9BQ65 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
USB1Q9BQ65 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
USB1Q9BQ65 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
USB1Q9BQ65 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
USB1Q9BQ65 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
USB1Q9BQ65 AC021146.4-201ENST00000309229 279 ntBASIC3.98□□□□□ -1.77
USB1Q9BQ65 RNU1-72P-201ENST00000362976 153 ntBASIC3.98□□□□□ -1.77
USB1Q9BQ65 RNA5SP447-201ENST00000363749 119 ntBASIC3.98□□□□□ -1.77
USB1Q9BQ65 RNU1-96P-201ENST00000364163 162 ntBASIC3.98□□□□□ -1.77
USB1Q9BQ65 RNU6-1083P-201ENST00000384022 107 ntBASIC3.98□□□□□ -1.77
USB1Q9BQ65 RNU6-1152P-201ENST00000384576 107 ntBASIC3.98□□□□□ -1.77
USB1Q9BQ65 MT-TI-201ENST00000387365 69 ntBASIC3.98□□□□□ -1.77
USB1Q9BQ65 AL138878.1-201ENST00000405131 347 ntBASIC3.98□□□□□ -1.77
USB1Q9BQ65 RNU6-1186P-201ENST00000410429 97 ntBASIC3.98□□□□□ -1.77
USB1Q9BQ65 AC109327.2-201ENST00000448339 378 ntBASIC3.98□□□□□ -1.77
USB1Q9BQ65 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.98□□□□□ -1.77
USB1Q9BQ65 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.98□□□□□ -1.77
USB1Q9BQ65 SCGB1D5P-201ENST00000515134 247 ntBASIC3.98□□□□□ -1.77
USB1Q9BQ65 RNU6-1291P-201ENST00000516591 104 ntBASIC3.98□□□□□ -1.77
USB1Q9BQ65 CR392039.5-201ENST00000623201 510 ntBASIC3.98□□□□□ -1.77
USB1Q9BQ65 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
USB1Q9BQ65 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms