Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC018448.1-201ENST00000552843 316 ntBASIC2.79□□□□□ -1.96
SMOQ99835 AC027176.1-201ENST00000560204 514 ntBASIC2.79□□□□□ -1.96
SMOQ99835 AC026470.2-201ENST00000561492 181 ntBASIC2.79□□□□□ -1.96
SMOQ99835 AC233702.2-202ENST00000562547 291 ntBASIC2.79□□□□□ -1.96
SMOQ99835 AC055872.1-201ENST00000570978 278 ntBASIC2.79□□□□□ -1.96
SMOQ99835 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.79□□□□□ -1.96
SMOQ99835 MIR4635-201ENST00000583759 79 ntBASIC2.79□□□□□ -1.96
SMOQ99835 AC010620.2-201ENST00000600135 313 ntBASIC2.79□□□□□ -1.96
SMOQ99835 AL713866.2-201ENST00000603579 219 ntBASIC2.79□□□□□ -1.96
SMOQ99835 AL670379.2-201ENST00000604983 252 ntBASIC2.79□□□□□ -1.96
SMOQ99835 TCL6_2.1-201ENST00000615162 119 ntBASIC2.79□□□□□ -1.96
SMOQ99835 MIR6715A-201ENST00000615929 79 ntBASIC2.79□□□□□ -1.96
SMOQ99835 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
SMOQ99835 AC099654.7-201ENST00000635788 2127 ntBASIC2.78□□□□□ -1.96
SMOQ99835 AC108206.1-201ENST00000570186 4159 ntBASIC2.78□□□□□ -1.96
SMOQ99835 RNU1-62P-201ENST00000362599 164 ntBASIC2.78□□□□□ -1.96
SMOQ99835 Y_RNA.60-201ENST00000362831 98 ntBASIC2.78□□□□□ -1.96
SMOQ99835 SNORD32B-201ENST00000364460 84 ntBASIC2.78□□□□□ -1.96
SMOQ99835 Y_RNA.570-201ENST00000384750 101 ntBASIC2.78□□□□□ -1.96
SMOQ99835 AL033519.2-201ENST00000403958 392 ntBASIC2.78□□□□□ -1.96
SMOQ99835 MIR320B2-201ENST00000408479 138 ntBASIC2.78□□□□□ -1.96
SMOQ99835 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.78□□□□□ -1.96
SMOQ99835 MICF-203ENST00000432679 129 ntBASIC2.78□□□□□ -1.96
SMOQ99835 RPL23AP58-201ENST00000440453 469 ntBASIC2.78□□□□□ -1.96
SMOQ99835 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.78□□□□□ -1.96
SMOQ99835 RNU6-625P-201ENST00000459412 107 ntBASIC2.78□□□□□ -1.96
SMOQ99835 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.78□□□□□ -1.96
SMOQ99835 AC107222.1-201ENST00000510899 637 ntBASIC2.78□□□□□ -1.96
SMOQ99835 AC096725.1-201ENST00000514266 313 ntBASIC2.78□□□□□ -1.96
SMOQ99835 RNU6-388P-201ENST00000517012 105 ntBASIC2.78□□□□□ -1.96
SMOQ99835 RNU6-389P-201ENST00000517048 105 ntBASIC2.78□□□□□ -1.96
SMOQ99835 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.78□□□□□ -1.96
SMOQ99835 MIR3199-1-201ENST00000582434 88 ntBASIC2.78□□□□□ -1.96
SMOQ99835 MIR5006-201ENST00000583027 110 ntBASIC2.78□□□□□ -1.96
SMOQ99835 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.78□□□□□ -1.96
SMOQ99835 AC023043.3-201ENST00000593113 385 ntBASIC2.78□□□□□ -1.96
SMOQ99835 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.78□□□□□ -1.96
SMOQ99835 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.77□□□□□ -1.97
SMOQ99835 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
SMOQ99835 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.77□□□□□ -1.97
SMOQ99835 AL161431.1-201ENST00000618966 4205 ntBASIC2.77□□□□□ -1.97
SMOQ99835 SNORD81.1-201ENST00000363064 77 ntBASIC2.77□□□□□ -1.97
SMOQ99835 RNU6-944P-201ENST00000364023 107 ntBASIC2.77□□□□□ -1.97
SMOQ99835 SNORD21-201ENST00000383953 95 ntBASIC2.77□□□□□ -1.97
SMOQ99835 Y_RNA.415-201ENST00000384012 112 ntBASIC2.77□□□□□ -1.97
SMOQ99835 MIR196B-201ENST00000384852 84 ntBASIC2.77□□□□□ -1.97
SMOQ99835 Y_RNA.597-201ENST00000410463 100 ntBASIC2.77□□□□□ -1.97
SMOQ99835 RNA5SP492-201ENST00000411330 114 ntBASIC2.77□□□□□ -1.97
SMOQ99835 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.77□□□□□ -1.97
SMOQ99835 AC139712.2-201ENST00000424302 339 ntBASIC2.77□□□□□ -1.97
SMOQ99835 RPL39P38-201ENST00000467018 153 ntBASIC2.77□□□□□ -1.97
SMOQ99835 RNU2-44P-201ENST00000516795 194 ntBASIC2.77□□□□□ -1.97
SMOQ99835 AC007536.1-201ENST00000533382 349 ntBASIC2.77□□□□□ -1.97
SMOQ99835 AP002001.1-203ENST00000534002 267 ntBASIC2.77□□□□□ -1.97
SMOQ99835 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.77□□□□□ -1.97
SMOQ99835 AC010900.2-201ENST00000604508 210 ntBASIC2.77□□□□□ -1.97
SMOQ99835 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SMOQ99835 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SMOQ99835 AL391987.6-201ENST00000305671 199 ntBASIC2.76□□□□□ -1.97
SMOQ99835 MIR335-201ENST00000362173 94 ntBASIC2.76□□□□□ -1.97
SMOQ99835 RNA5SP432-201ENST00000362480 116 ntBASIC2.76□□□□□ -1.97
SMOQ99835 SNORD87-201ENST00000364849 89 ntBASIC2.76□□□□□ -1.97
SMOQ99835 RNU6-1175P-201ENST00000365200 107 ntBASIC2.76□□□□□ -1.97
SMOQ99835 Y_RNA.489-201ENST00000384410 101 ntBASIC2.76□□□□□ -1.97
SMOQ99835 RNU6-1274P-201ENST00000384557 107 ntBASIC2.76□□□□□ -1.97
SMOQ99835 MIR29B2-201ENST00000385055 81 ntBASIC2.76□□□□□ -1.97
SMOQ99835 RNA5SP504-201ENST00000410676 117 ntBASIC2.76□□□□□ -1.97
SMOQ99835 RNU5A-5P-201ENST00000411054 116 ntBASIC2.76□□□□□ -1.97
SMOQ99835 RAB28P5-201ENST00000427490 651 ntBASIC2.76□□□□□ -1.97
SMOQ99835 AC009237.7-201ENST00000447357 229 ntBASIC2.76□□□□□ -1.97
SMOQ99835 MTND4LP30-201ENST00000454092 297 ntBASIC2.76□□□□□ -1.97
SMOQ99835 AC090515.1-201ENST00000465295 476 ntBASIC2.76□□□□□ -1.97
SMOQ99835 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.76□□□□□ -1.97
SMOQ99835 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.76□□□□□ -1.97
SMOQ99835 AC074133.1-201ENST00000515696 183 ntBASIC2.76□□□□□ -1.97
SMOQ99835 Y_RNA.673-201ENST00000516306 88 ntBASIC2.76□□□□□ -1.97
SMOQ99835 RNA5SP282-201ENST00000516355 108 ntBASIC2.76□□□□□ -1.97
SMOQ99835 RNU6-966P-201ENST00000516479 104 ntBASIC2.76□□□□□ -1.97
SMOQ99835 RNU7-110P-201ENST00000516891 62 ntBASIC2.76□□□□□ -1.97
SMOQ99835 SCARNA3-201ENST00000517097 143 ntBASIC2.76□□□□□ -1.97
SMOQ99835 CYCSP23-201ENST00000519781 313 ntBASIC2.76□□□□□ -1.97
SMOQ99835 AC005357.1-201ENST00000588399 301 ntBASIC2.76□□□□□ -1.97
SMOQ99835 AC005176.2-201ENST00000596933 147 ntBASIC2.76□□□□□ -1.97
SMOQ99835 AC011373.1-201ENST00000607270 237 ntBASIC2.76□□□□□ -1.97
SMOQ99835 AC080128.1-201ENST00000474389 1917 ntBASIC2.76□□□□□ -1.97
SMOQ99835 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SMOQ99835 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SMOQ99835 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.75□□□□□ -1.97
SMOQ99835 Y_RNA.230-201ENST00000364348 109 ntBASIC2.75□□□□□ -1.97
SMOQ99835 RNU6-290P-201ENST00000365212 101 ntBASIC2.75□□□□□ -1.97
SMOQ99835 Y_RNA.498-201ENST00000384460 102 ntBASIC2.75□□□□□ -1.97
SMOQ99835 BMS1P22-201ENST00000414726 313 ntBASIC2.75□□□□□ -1.97
SMOQ99835 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.75□□□□□ -1.97
SMOQ99835 RPL23AP3-201ENST00000453844 468 ntBASIC2.75□□□□□ -1.97
SMOQ99835 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.75□□□□□ -1.97
SMOQ99835 MIR449C-201ENST00000516047 92 ntBASIC2.75□□□□□ -1.97
SMOQ99835 RNU6-344P-201ENST00000516635 111 ntBASIC2.75□□□□□ -1.97
SMOQ99835 RNU1-117P-201ENST00000517041 158 ntBASIC2.75□□□□□ -1.97
SMOQ99835 RNU6-794P-201ENST00000517261 64 ntBASIC2.75□□□□□ -1.97
SMOQ99835 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms