Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.43□□□□□ -2.02
NOTCH4Q99466 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NOTCH4Q99466 RNU6-137P-201ENST00000363680 108 ntBASIC2.42□□□□□ -2.02
NOTCH4Q99466 RNU5F-3P-201ENST00000363767 117 ntBASIC2.42□□□□□ -2.02
NOTCH4Q99466 RNU2-37P-201ENST00000410695 177 ntBASIC2.42□□□□□ -2.02
NOTCH4Q99466 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.42□□□□□ -2.02
NOTCH4Q99466 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.42□□□□□ -2.02
NOTCH4Q99466 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.42□□□□□ -2.02
NOTCH4Q99466 AC009237.8-201ENST00000445492 379 ntBASIC2.42□□□□□ -2.02
NOTCH4Q99466 MTATP6P7-201ENST00000453315 681 ntBASIC2.42□□□□□ -2.02
NOTCH4Q99466 AC010285.1-201ENST00000470580 392 ntBASIC2.42□□□□□ -2.02
NOTCH4Q99466 AC016256.1-201ENST00000547971 354 ntBASIC2.42□□□□□ -2.02
NOTCH4Q99466 DEFB122-202ENST00000569013 197 ntBASIC2.42□□□□□ -2.02
NOTCH4Q99466 U6.98-201ENST00000637157 84 ntBASIC2.42□□□□□ -2.02
NOTCH4Q99466 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NOTCH4Q99466 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
NOTCH4Q99466 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.42□□□□□ -2.02
NOTCH4Q99466 Y_RNA.23-201ENST00000362496 106 ntBASIC2.42□□□□□ -2.02
NOTCH4Q99466 Y_RNA.240-201ENST00000364469 95 ntBASIC2.42□□□□□ -2.02
NOTCH4Q99466 Y_RNA.291-201ENST00000364886 113 ntBASIC2.42□□□□□ -2.02
NOTCH4Q99466 RNU6-898P-201ENST00000365627 104 ntBASIC2.42□□□□□ -2.02
NOTCH4Q99466 RNU1-73P-201ENST00000383971 164 ntBASIC2.42□□□□□ -2.02
NOTCH4Q99466 RNU6-1181P-201ENST00000384191 106 ntBASIC2.42□□□□□ -2.02
NOTCH4Q99466 RNU6-80P-201ENST00000384195 107 ntBASIC2.42□□□□□ -2.02
NOTCH4Q99466 RNA5SP213-201ENST00000391031 106 ntBASIC2.42□□□□□ -2.02
NOTCH4Q99466 RPL27AP8-201ENST00000424277 446 ntBASIC2.42□□□□□ -2.02
NOTCH4Q99466 AL512844.2-201ENST00000433990 593 ntBASIC2.42□□□□□ -2.02
NOTCH4Q99466 AC005042.3-201ENST00000453230 174 ntBASIC2.42□□□□□ -2.02
NOTCH4Q99466 AC092798.1-201ENST00000458542 409 ntBASIC2.42□□□□□ -2.02
NOTCH4Q99466 SNORD116-28-201ENST00000516123 91 ntBASIC2.42□□□□□ -2.02
NOTCH4Q99466 AC093331.1-201ENST00000521474 169 ntBASIC2.42□□□□□ -2.02
NOTCH4Q99466 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.42□□□□□ -2.02
NOTCH4Q99466 MIR3690-201ENST00000580266 75 ntBASIC2.42□□□□□ -2.02
NOTCH4Q99466 AC060766.3-201ENST00000591442 263 ntBASIC2.42□□□□□ -2.02
NOTCH4Q99466 AC073349.3-201ENST00000617616 186 ntBASIC2.42□□□□□ -2.02
NOTCH4Q99466 MIR6766-201ENST00000622641 72 ntBASIC2.42□□□□□ -2.02
NOTCH4Q99466 U2.21-201ENST00000637295 81 ntBASIC2.42□□□□□ -2.02
NOTCH4Q99466 AC022336.2-201ENST00000568966 2538 ntBASIC2.42□□□□□ -2.02
NOTCH4Q99466 AC009541.1-201ENST00000438279 2662 ntBASIC2.42□□□□□ -2.02
NOTCH4Q99466 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
NOTCH4Q99466 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
NOTCH4Q99466 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
NOTCH4Q99466 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
NOTCH4Q99466 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.41□□□□□ -2.02
NOTCH4Q99466 SNORA25.1-201ENST00000362326 128 ntBASIC2.41□□□□□ -2.02
NOTCH4Q99466 RNU6-222P-201ENST00000362438 107 ntBASIC2.41□□□□□ -2.02
NOTCH4Q99466 SNORD114-1-201ENST00000362705 72 ntBASIC2.41□□□□□ -2.02
NOTCH4Q99466 RNA5SP456-201ENST00000364002 114 ntBASIC2.41□□□□□ -2.02
NOTCH4Q99466 RNU4-56P-201ENST00000364700 142 ntBASIC2.41□□□□□ -2.02
NOTCH4Q99466 RNU6-336P-201ENST00000364891 107 ntBASIC2.41□□□□□ -2.02
NOTCH4Q99466 RNU6-21P-201ENST00000384710 107 ntBASIC2.41□□□□□ -2.02
NOTCH4Q99466 AC024067.1-201ENST00000426199 223 ntBASIC2.41□□□□□ -2.02
NOTCH4Q99466 RPL30P1-201ENST00000488676 339 ntBASIC2.41□□□□□ -2.02
NOTCH4Q99466 SNORA27.4-201ENST00000516650 95 ntBASIC2.41□□□□□ -2.02
NOTCH4Q99466 RNU6-567P-201ENST00000516746 107 ntBASIC2.41□□□□□ -2.02
NOTCH4Q99466 RNU7-110P-201ENST00000516891 62 ntBASIC2.41□□□□□ -2.02
NOTCH4Q99466 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.41□□□□□ -2.02
NOTCH4Q99466 MIR6873-201ENST00000622788 63 ntBASIC2.41□□□□□ -2.02
NOTCH4Q99466 AC092881.1-201ENST00000638218 2733 ntBASIC2.41□□□□□ -2.02
NOTCH4Q99466 AL161431.1-201ENST00000618966 4205 ntBASIC2.41□□□□□ -2.02
NOTCH4Q99466 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
NOTCH4Q99466 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
NOTCH4Q99466 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
NOTCH4Q99466 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.41□□□□□ -2.02
NOTCH4Q99466 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.41□□□□□ -2.02
NOTCH4Q99466 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.41□□□□□ -2.02
NOTCH4Q99466 SNORD32A-201ENST00000364805 84 ntBASIC2.41□□□□□ -2.02
NOTCH4Q99466 SNORD116-18-201ENST00000383961 92 ntBASIC2.41□□□□□ -2.02
NOTCH4Q99466 MIR153-2-201ENST00000385225 87 ntBASIC2.41□□□□□ -2.02
NOTCH4Q99466 RNU2-61P-201ENST00000411069 191 ntBASIC2.41□□□□□ -2.02
NOTCH4Q99466 BTF3P11-201ENST00000426582 477 ntBASIC2.41□□□□□ -2.02
NOTCH4Q99466 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.41□□□□□ -2.02
NOTCH4Q99466 SNRPEP9-201ENST00000436794 238 ntBASIC2.41□□□□□ -2.02
NOTCH4Q99466 AC005002.2-201ENST00000438228 269 ntBASIC2.41□□□□□ -2.02
NOTCH4Q99466 AL049874.1-201ENST00000489560 388 ntBASIC2.41□□□□□ -2.02
NOTCH4Q99466 SNORA31.8-201ENST00000516327 108 ntBASIC2.41□□□□□ -2.02
NOTCH4Q99466 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.41□□□□□ -2.02
NOTCH4Q99466 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.41□□□□□ -2.02
NOTCH4Q99466 AC104465.1-201ENST00000611365 139 ntBASIC2.41□□□□□ -2.02
NOTCH4Q99466 MIR1291-201ENST00000627649 87 ntBASIC2.41□□□□□ -2.02
NOTCH4Q99466 MTND1P7-201ENST00000632801 297 ntBASIC2.41□□□□□ -2.02
NOTCH4Q99466 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
NOTCH4Q99466 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.4□□□□□ -2.02
NOTCH4Q99466 RBBP8P1-201ENST00000449447 1844 ntBASIC2.4□□□□□ -2.02
NOTCH4Q99466 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
NOTCH4Q99466 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.4□□□□□ -2.03
NOTCH4Q99466 RNU6-512P-201ENST00000364438 103 ntBASIC2.4□□□□□ -2.03
NOTCH4Q99466 Y_RNA.272-201ENST00000364696 102 ntBASIC2.4□□□□□ -2.03
NOTCH4Q99466 RNU6-1175P-201ENST00000365200 107 ntBASIC2.4□□□□□ -2.03
NOTCH4Q99466 RNU6-1145P-201ENST00000384246 107 ntBASIC2.4□□□□□ -2.03
NOTCH4Q99466 HMGN2P30-201ENST00000423237 256 ntBASIC2.4□□□□□ -2.03
NOTCH4Q99466 AL162725.1-201ENST00000435405 301 ntBASIC2.4□□□□□ -2.03
NOTCH4Q99466 RNU6-479P-201ENST00000516348 105 ntBASIC2.4□□□□□ -2.03
NOTCH4Q99466 RNA5SP291-201ENST00000517222 105 ntBASIC2.4□□□□□ -2.03
NOTCH4Q99466 MIR5692C2-201ENST00000577959 77 ntBASIC2.4□□□□□ -2.03
NOTCH4Q99466 AC090616.3-201ENST00000582184 217 ntBASIC2.4□□□□□ -2.03
NOTCH4Q99466 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.4□□□□□ -2.03
NOTCH4Q99466 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
NOTCH4Q99466 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
NOTCH4Q99466 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms