Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 Y_RNA.415-201ENST00000384012 112 ntBASIC3.42□□□□□ -1.86
FGD4Q96M96 RNU2-61P-201ENST00000411069 191 ntBASIC3.42□□□□□ -1.86
FGD4Q96M96 Y_RNA.626-201ENST00000411288 95 ntBASIC3.42□□□□□ -1.86
FGD4Q96M96 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.42□□□□□ -1.86
FGD4Q96M96 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.42□□□□□ -1.86
FGD4Q96M96 SNORD2.1-201ENST00000458762 69 ntBASIC3.42□□□□□ -1.86
FGD4Q96M96 RNA5SP385-201ENST00000515947 110 ntBASIC3.42□□□□□ -1.86
FGD4Q96M96 AC245166.1-201ENST00000521012 253 ntBASIC3.42□□□□□ -1.86
FGD4Q96M96 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.42□□□□□ -1.86
FGD4Q96M96 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.42□□□□□ -1.86
FGD4Q96M96 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.42□□□□□ -1.86
FGD4Q96M96 MIR5006-201ENST00000583027 110 ntBASIC3.42□□□□□ -1.86
FGD4Q96M96 MIR4506-201ENST00000584693 77 ntBASIC3.42□□□□□ -1.86
FGD4Q96M96 Z83818.1-201ENST00000603584 150 ntBASIC3.42□□□□□ -1.86
FGD4Q96M96 AC011921.3-201ENST00000605540 361 ntBASIC3.42□□□□□ -1.86
FGD4Q96M96 AL365434.2-201ENST00000607979 234 ntBASIC3.42□□□□□ -1.86
FGD4Q96M96 AC110079.1-202ENST00000635213 138 ntBASIC3.42□□□□□ -1.86
FGD4Q96M96 AC091564.4-201ENST00000533934 2194 ntBASIC3.42□□□□□ -1.86
FGD4Q96M96 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.42□□□□□ -1.86
FGD4Q96M96 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.42□□□□□ -1.86
FGD4Q96M96 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.41□□□□□ -1.86
FGD4Q96M96 snoU2_19.1-201ENST00000362361 80 ntBASIC3.41□□□□□ -1.86
FGD4Q96M96 SNORA18.2-201ENST00000383865 132 ntBASIC3.41□□□□□ -1.86
FGD4Q96M96 Y_RNA.590-201ENST00000410140 107 ntBASIC3.41□□□□□ -1.86
FGD4Q96M96 AC009963.1-201ENST00000417265 157 ntBASIC3.41□□□□□ -1.86
FGD4Q96M96 SUMO1P3-201ENST00000439961 304 ntBASIC3.41□□□□□ -1.86
FGD4Q96M96 NDUFB4P10-201ENST00000452541 359 ntBASIC3.41□□□□□ -1.86
FGD4Q96M96 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.41□□□□□ -1.86
FGD4Q96M96 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.41□□□□□ -1.86
FGD4Q96M96 RNA5SP112-201ENST00000515937 99 ntBASIC3.41□□□□□ -1.86
FGD4Q96M96 RNU2-44P-201ENST00000516795 194 ntBASIC3.41□□□□□ -1.86
FGD4Q96M96 SCARNA11.3-201ENST00000517276 130 ntBASIC3.41□□□□□ -1.86
FGD4Q96M96 RPL21P9-201ENST00000556149 474 ntBASIC3.41□□□□□ -1.86
FGD4Q96M96 AC103810.1-201ENST00000579873 453 ntBASIC3.41□□□□□ -1.86
FGD4Q96M96 MIR3162-201ENST00000581818 82 ntBASIC3.41□□□□□ -1.86
FGD4Q96M96 MIR4765-201ENST00000585007 77 ntBASIC3.41□□□□□ -1.86
FGD4Q96M96 AL512605.2-201ENST00000592972 256 ntBASIC3.41□□□□□ -1.86
FGD4Q96M96 AC007318.2-201ENST00000620999 243 ntBASIC3.41□□□□□ -1.86
FGD4Q96M96 AC073476.4-201ENST00000628409 72 ntBASIC3.41□□□□□ -1.86
FGD4Q96M96 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
FGD4Q96M96 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
FGD4Q96M96 AC008264.2-201ENST00000610193 3731 ntBASIC3.41□□□□□ -1.86
FGD4Q96M96 RNA5SP139-201ENST00000364340 117 ntBASIC3.4□□□□□ -1.87
FGD4Q96M96 SNORA67.2-201ENST00000384300 149 ntBASIC3.4□□□□□ -1.87
FGD4Q96M96 RNU6-1289P-201ENST00000384431 106 ntBASIC3.4□□□□□ -1.87
FGD4Q96M96 MIR29B2-201ENST00000385055 81 ntBASIC3.4□□□□□ -1.87
FGD4Q96M96 RNA5SP504-201ENST00000410676 117 ntBASIC3.4□□□□□ -1.87
FGD4Q96M96 Y_RNA.793-201ENST00000411222 111 ntBASIC3.4□□□□□ -1.87
FGD4Q96M96 TRIAP1P1-201ENST00000427062 225 ntBASIC3.4□□□□□ -1.87
FGD4Q96M96 RNU7-120P-201ENST00000459334 63 ntBASIC3.4□□□□□ -1.87
FGD4Q96M96 Y_RNA.638-201ENST00000459374 113 ntBASIC3.4□□□□□ -1.87
FGD4Q96M96 RN7SL20P-201ENST00000488827 297 ntBASIC3.4□□□□□ -1.87
FGD4Q96M96 RNU2-12P-201ENST00000517216 168 ntBASIC3.4□□□□□ -1.87
FGD4Q96M96 AC079600.2-201ENST00000550076 130 ntBASIC3.4□□□□□ -1.87
FGD4Q96M96 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.4□□□□□ -1.87
FGD4Q96M96 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.39□□□□□ -1.87
FGD4Q96M96 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
FGD4Q96M96 RNU6-486P-201ENST00000363116 107 ntBASIC3.39□□□□□ -1.87
FGD4Q96M96 Y_RNA.217-201ENST00000364214 105 ntBASIC3.39□□□□□ -1.87
FGD4Q96M96 SNORD32B-201ENST00000364460 84 ntBASIC3.39□□□□□ -1.87
FGD4Q96M96 RNU6-1248P-201ENST00000391096 64 ntBASIC3.39□□□□□ -1.87
FGD4Q96M96 RNU6-651P-201ENST00000411040 105 ntBASIC3.39□□□□□ -1.87
FGD4Q96M96 Y_RNA.641-201ENST00000459414 105 ntBASIC3.39□□□□□ -1.87
FGD4Q96M96 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.39□□□□□ -1.87
FGD4Q96M96 SNORD116-28-201ENST00000516123 91 ntBASIC3.39□□□□□ -1.87
FGD4Q96M96 RNU6-155P-201ENST00000516347 100 ntBASIC3.39□□□□□ -1.87
FGD4Q96M96 Y_RNA.679-201ENST00000516416 91 ntBASIC3.39□□□□□ -1.87
FGD4Q96M96 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.39□□□□□ -1.87
FGD4Q96M96 AC008739.2-201ENST00000597006 317 ntBASIC3.39□□□□□ -1.87
FGD4Q96M96 RPL30P11-203ENST00000598995 310 ntBASIC3.39□□□□□ -1.87
FGD4Q96M96 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
FGD4Q96M96 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
FGD4Q96M96 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
FGD4Q96M96 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
FGD4Q96M96 MIR449A-201ENST00000362113 91 ntBASIC3.38□□□□□ -1.87
FGD4Q96M96 Y_RNA.270-201ENST00000364693 104 ntBASIC3.38□□□□□ -1.87
FGD4Q96M96 RNU6-886P-201ENST00000384319 105 ntBASIC3.38□□□□□ -1.87
FGD4Q96M96 AC105272.1-201ENST00000438604 198 ntBASIC3.38□□□□□ -1.87
FGD4Q96M96 SUMO1P2-201ENST00000452524 304 ntBASIC3.38□□□□□ -1.87
FGD4Q96M96 RPL31P41-201ENST00000477967 372 ntBASIC3.38□□□□□ -1.87
FGD4Q96M96 RNU6-191P-201ENST00000516295 94 ntBASIC3.38□□□□□ -1.87
FGD4Q96M96 RNA5SP367-201ENST00000516557 118 ntBASIC3.38□□□□□ -1.87
FGD4Q96M96 MIR4319-201ENST00000577285 85 ntBASIC3.38□□□□□ -1.87
FGD4Q96M96 AC006380.1-201ENST00000603598 186 ntBASIC3.38□□□□□ -1.87
FGD4Q96M96 AL670379.2-201ENST00000604983 252 ntBASIC3.38□□□□□ -1.87
FGD4Q96M96 UCA1.1-201ENST00000620952 75 ntBASIC3.38□□□□□ -1.87
FGD4Q96M96 AC008873.1-201ENST00000625051 138 ntBASIC3.38□□□□□ -1.87
FGD4Q96M96 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
FGD4Q96M96 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
FGD4Q96M96 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
FGD4Q96M96 RNU6-454P-201ENST00000364292 107 ntBASIC3.37□□□□□ -1.87
FGD4Q96M96 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.37□□□□□ -1.87
FGD4Q96M96 RN7SKP123-201ENST00000410732 291 ntBASIC3.37□□□□□ -1.87
FGD4Q96M96 TOMM22P2-201ENST00000430735 237 ntBASIC3.37□□□□□ -1.87
FGD4Q96M96 AC244505.4-201ENST00000434905 287 ntBASIC3.37□□□□□ -1.87
FGD4Q96M96 AC104332.1-201ENST00000440471 797 ntBASIC3.37□□□□□ -1.87
FGD4Q96M96 SSXP5-201ENST00000443473 287 ntBASIC3.37□□□□□ -1.87
FGD4Q96M96 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.37□□□□□ -1.87
FGD4Q96M96 SCARNA17.1-201ENST00000516211 143 ntBASIC3.37□□□□□ -1.87
FGD4Q96M96 SCARNA17.2-201ENST00000516334 143 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 156 ms