Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 CR769767.1-201ENST00000436337 346 ntBASIC3.93□□□□□ -1.78
CALR3Q96L12 RPL23AP58-201ENST00000440453 469 ntBASIC3.93□□□□□ -1.78
CALR3Q96L12 MTCO1P44-201ENST00000441935 243 ntBASIC3.93□□□□□ -1.78
CALR3Q96L12 AC006539.3-201ENST00000454258 129 ntBASIC3.93□□□□□ -1.78
CALR3Q96L12 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.93□□□□□ -1.78
CALR3Q96L12 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.93□□□□□ -1.78
CALR3Q96L12 CYCSP30-201ENST00000546447 172 ntBASIC3.93□□□□□ -1.78
CALR3Q96L12 MIR4425-201ENST00000580572 84 ntBASIC3.93□□□□□ -1.78
CALR3Q96L12 AC005972.2-201ENST00000604690 348 ntBASIC3.93□□□□□ -1.78
CALR3Q96L12 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
CALR3Q96L12 AL021368.2-201ENST00000606125 5352 ntBASIC3.93□□□□□ -1.78
CALR3Q96L12 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CALR3Q96L12 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.92□□□□□ -1.78
CALR3Q96L12 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CALR3Q96L12 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CALR3Q96L12 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CALR3Q96L12 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CALR3Q96L12 Y_RNA.332-201ENST00000365271 113 ntBASIC3.92□□□□□ -1.78
CALR3Q96L12 SNORD50.2-201ENST00000365465 70 ntBASIC3.92□□□□□ -1.78
CALR3Q96L12 SNORA70C-201ENST00000384538 135 ntBASIC3.92□□□□□ -1.78
CALR3Q96L12 SNORA36B-201ENST00000410438 131 ntBASIC3.92□□□□□ -1.78
CALR3Q96L12 AC016909.1-201ENST00000415916 166 ntBASIC3.92□□□□□ -1.78
CALR3Q96L12 EEF1B2P7-201ENST00000451177 676 ntBASIC3.92□□□□□ -1.78
CALR3Q96L12 AC010409.1-201ENST00000487382 476 ntBASIC3.92□□□□□ -1.78
CALR3Q96L12 SNORA31.9-201ENST00000516429 84 ntBASIC3.92□□□□□ -1.78
CALR3Q96L12 RNU7-116P-201ENST00000516940 62 ntBASIC3.92□□□□□ -1.78
CALR3Q96L12 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.92□□□□□ -1.78
CALR3Q96L12 AL606490.9-201ENST00000603331 271 ntBASIC3.92□□□□□ -1.78
CALR3Q96L12 AC008745.1-201ENST00000604064 271 ntBASIC3.92□□□□□ -1.78
CALR3Q96L12 MIR6867-201ENST00000610636 67 ntBASIC3.92□□□□□ -1.78
CALR3Q96L12 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.92□□□□□ -1.78
CALR3Q96L12 AC132825.6-201ENST00000638861 357 ntBASIC3.92□□□□□ -1.78
CALR3Q96L12 AP000553.6-201ENST00000641242 118 ntBASIC3.92□□□□□ -1.78
CALR3Q96L12 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
CALR3Q96L12 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CALR3Q96L12 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CALR3Q96L12 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CALR3Q96L12 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CALR3Q96L12 RNU6-461P-201ENST00000364195 107 ntBASIC3.91□□□□□ -1.78
CALR3Q96L12 RNU6-1130P-201ENST00000365434 107 ntBASIC3.91□□□□□ -1.78
CALR3Q96L12 RNU6-449P-201ENST00000383914 107 ntBASIC3.91□□□□□ -1.78
CALR3Q96L12 RPL21P65-201ENST00000406094 466 ntBASIC3.91□□□□□ -1.78
CALR3Q96L12 RNU2-48P-201ENST00000410694 191 ntBASIC3.91□□□□□ -1.78
CALR3Q96L12 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.91□□□□□ -1.78
CALR3Q96L12 NDUFB1P1-201ENST00000435191 180 ntBASIC3.91□□□□□ -1.78
CALR3Q96L12 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.91□□□□□ -1.78
CALR3Q96L12 SNORA4.4-201ENST00000515921 135 ntBASIC3.91□□□□□ -1.78
CALR3Q96L12 RNU6-991P-201ENST00000516168 107 ntBASIC3.91□□□□□ -1.78
CALR3Q96L12 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.91□□□□□ -1.78
CALR3Q96L12 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.91□□□□□ -1.78
CALR3Q96L12 MIR3939-201ENST00000582614 106 ntBASIC3.91□□□□□ -1.78
CALR3Q96L12 POLR3GP1-201ENST00000594073 261 ntBASIC3.91□□□□□ -1.78
CALR3Q96L12 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.91□□□□□ -1.78
CALR3Q96L12 AL391903.3-201ENST00000612158 163 ntBASIC3.91□□□□□ -1.78
CALR3Q96L12 MIR6500-201ENST00000622700 86 ntBASIC3.91□□□□□ -1.78
CALR3Q96L12 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.91□□□□□ -1.78
CALR3Q96L12 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.91□□□□□ -1.78
CALR3Q96L12 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CALR3Q96L12 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.9□□□□□ -1.78
CALR3Q96L12 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CALR3Q96L12 MFSD8-233ENST00000641482 4860 ntBASIC3.9□□□□□ -1.78
CALR3Q96L12 CENPCP1-201ENST00000533085 2578 ntBASIC3.9□□□□□ -1.78
CALR3Q96L12 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.9□□□□□ -1.78
CALR3Q96L12 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.9□□□□□ -1.78
CALR3Q96L12 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CALR3Q96L12 RNU6-704P-201ENST00000364162 103 ntBASIC3.9□□□□□ -1.79
CALR3Q96L12 RNA5SP42-201ENST00000364278 115 ntBASIC3.9□□□□□ -1.79
CALR3Q96L12 AL135786.1-201ENST00000415892 214 ntBASIC3.9□□□□□ -1.79
CALR3Q96L12 AC003685.2-201ENST00000422795 395 ntBASIC3.9□□□□□ -1.79
CALR3Q96L12 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.9□□□□□ -1.79
CALR3Q96L12 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.9□□□□□ -1.79
CALR3Q96L12 RPS27P22-201ENST00000478056 241 ntBASIC3.9□□□□□ -1.79
CALR3Q96L12 SCARNA8-201ENST00000515924 131 ntBASIC3.9□□□□□ -1.79
CALR3Q96L12 RNU2-27P-201ENST00000516185 142 ntBASIC3.9□□□□□ -1.79
CALR3Q96L12 RNU6-1007P-201ENST00000516586 107 ntBASIC3.9□□□□□ -1.79
CALR3Q96L12 AC127455.1-201ENST00000565496 145 ntBASIC3.9□□□□□ -1.79
CALR3Q96L12 MIR4431-201ENST00000579990 94 ntBASIC3.9□□□□□ -1.79
CALR3Q96L12 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.9□□□□□ -1.79
CALR3Q96L12 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CALR3Q96L12 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CALR3Q96L12 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
CALR3Q96L12 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CALR3Q96L12 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.89□□□□□ -1.79
CALR3Q96L12 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
CALR3Q96L12 AC245047.8-201ENST00000456455 284 ntBASIC3.89□□□□□ -1.79
CALR3Q96L12 RNU6-63P-201ENST00000516690 95 ntBASIC3.89□□□□□ -1.79
CALR3Q96L12 RNU6-453P-201ENST00000516819 85 ntBASIC3.89□□□□□ -1.79
CALR3Q96L12 AC109810.1-201ENST00000534066 224 ntBASIC3.89□□□□□ -1.79
CALR3Q96L12 MIR5187-201ENST00000583479 76 ntBASIC3.89□□□□□ -1.79
CALR3Q96L12 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CALR3Q96L12 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.89□□□□□ -1.79
CALR3Q96L12 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CALR3Q96L12 AC092435.3-201ENST00000565538 3654 ntBASIC3.89□□□□□ -1.79
CALR3Q96L12 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.89□□□□□ -1.79
CALR3Q96L12 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.88□□□□□ -1.79
CALR3Q96L12 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.88□□□□□ -1.79
CALR3Q96L12 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.88□□□□□ -1.79
CALR3Q96L12 Y_RNA.229-201ENST00000364347 113 ntBASIC3.88□□□□□ -1.79
CALR3Q96L12 MIR181A2-201ENST00000384863 110 ntBASIC3.88□□□□□ -1.79
CALR3Q96L12 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms