Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC009237.7-201ENST00000447357 229 ntBASIC2.16□□□□□ -2.06
SLC44A1Q8WWI5 AC025033.1-201ENST00000463883 194 ntBASIC2.16□□□□□ -2.06
SLC44A1Q8WWI5 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.16□□□□□ -2.06
SLC44A1Q8WWI5 AC091144.1-201ENST00000519573 138 ntBASIC2.16□□□□□ -2.06
SLC44A1Q8WWI5 NDUFA5P6-201ENST00000542110 379 ntBASIC2.16□□□□□ -2.06
SLC44A1Q8WWI5 AC020661.2-201ENST00000560114 134 ntBASIC2.16□□□□□ -2.06
SLC44A1Q8WWI5 AL138825.1-201ENST00000618587 192 ntBASIC2.16□□□□□ -2.06
SLC44A1Q8WWI5 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.15□□□□□ -2.06
SLC44A1Q8WWI5 RNU6-873P-201ENST00000363833 107 ntBASIC2.15□□□□□ -2.07
SLC44A1Q8WWI5 Y_RNA.314-201ENST00000365114 102 ntBASIC2.15□□□□□ -2.07
SLC44A1Q8WWI5 SNORA18.2-201ENST00000383865 132 ntBASIC2.15□□□□□ -2.07
SLC44A1Q8WWI5 RNY1P14-201ENST00000384426 108 ntBASIC2.15□□□□□ -2.07
SLC44A1Q8WWI5 U3.40-201ENST00000408706 208 ntBASIC2.15□□□□□ -2.07
SLC44A1Q8WWI5 AC027124.2-201ENST00000428249 105 ntBASIC2.15□□□□□ -2.07
SLC44A1Q8WWI5 RPS27P21-201ENST00000486977 252 ntBASIC2.15□□□□□ -2.07
SLC44A1Q8WWI5 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.15□□□□□ -2.07
SLC44A1Q8WWI5 RNU6-475P-201ENST00000516073 104 ntBASIC2.15□□□□□ -2.07
SLC44A1Q8WWI5 RNA5SP281-201ENST00000516504 135 ntBASIC2.15□□□□□ -2.07
SLC44A1Q8WWI5 RNU6-344P-201ENST00000516635 111 ntBASIC2.15□□□□□ -2.07
SLC44A1Q8WWI5 Y_RNA.711-201ENST00000516993 102 ntBASIC2.15□□□□□ -2.07
SLC44A1Q8WWI5 AC034114.1-201ENST00000520293 285 ntBASIC2.15□□□□□ -2.07
SLC44A1Q8WWI5 AC023442.1-201ENST00000531247 422 ntBASIC2.15□□□□□ -2.07
SLC44A1Q8WWI5 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SLC44A1Q8WWI5 AP002770.2-201ENST00000543613 532 ntBASIC2.15□□□□□ -2.07
SLC44A1Q8WWI5 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.15□□□□□ -2.07
SLC44A1Q8WWI5 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.15□□□□□ -2.07
SLC44A1Q8WWI5 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.15□□□□□ -2.07
SLC44A1Q8WWI5 MIR6132-201ENST00000622083 109 ntBASIC2.15□□□□□ -2.07
SLC44A1Q8WWI5 MIR4272-201ENST00000635924 64 ntBASIC2.15□□□□□ -2.07
SLC44A1Q8WWI5 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.15□□□□□ -2.07
SLC44A1Q8WWI5 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SLC44A1Q8WWI5 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
SLC44A1Q8WWI5 RNU1-62P-201ENST00000362599 164 ntBASIC2.14□□□□□ -2.07
SLC44A1Q8WWI5 RNA5SP160-201ENST00000364866 120 ntBASIC2.14□□□□□ -2.07
SLC44A1Q8WWI5 Y_RNA.358-201ENST00000365491 99 ntBASIC2.14□□□□□ -2.07
SLC44A1Q8WWI5 RNU6-281P-201ENST00000384212 103 ntBASIC2.14□□□□□ -2.07
SLC44A1Q8WWI5 Y_RNA.557-201ENST00000384680 107 ntBASIC2.14□□□□□ -2.07
SLC44A1Q8WWI5 MCFD2P1-201ENST00000417812 300 ntBASIC2.14□□□□□ -2.07
SLC44A1Q8WWI5 AC114482.1-201ENST00000418010 247 ntBASIC2.14□□□□□ -2.07
SLC44A1Q8WWI5 Z98742.3-201ENST00000418637 326 ntBASIC2.14□□□□□ -2.07
SLC44A1Q8WWI5 AC005534.2-201ENST00000431047 433 ntBASIC2.14□□□□□ -2.07
SLC44A1Q8WWI5 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.14□□□□□ -2.07
SLC44A1Q8WWI5 AC004386.2-201ENST00000441858 148 ntBASIC2.14□□□□□ -2.07
SLC44A1Q8WWI5 MTCO3P8-201ENST00000453691 755 ntBASIC2.14□□□□□ -2.07
SLC44A1Q8WWI5 RNU7-87P-201ENST00000459343 62 ntBASIC2.14□□□□□ -2.07
SLC44A1Q8WWI5 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.14□□□□□ -2.07
SLC44A1Q8WWI5 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.14□□□□□ -2.07
SLC44A1Q8WWI5 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.14□□□□□ -2.07
SLC44A1Q8WWI5 Y_RNA.661-201ENST00000516003 99 ntBASIC2.14□□□□□ -2.07
SLC44A1Q8WWI5 SCARNA16.3-201ENST00000516595 184 ntBASIC2.14□□□□□ -2.07
SLC44A1Q8WWI5 RN7SKP295-201ENST00000517264 153 ntBASIC2.14□□□□□ -2.07
SLC44A1Q8WWI5 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SLC44A1Q8WWI5 UBL5P4-201ENST00000562584 236 ntBASIC2.14□□□□□ -2.07
SLC44A1Q8WWI5 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.14□□□□□ -2.07
SLC44A1Q8WWI5 MIR4448-201ENST00000584360 86 ntBASIC2.14□□□□□ -2.07
SLC44A1Q8WWI5 AC104984.5-201ENST00000586878 94 ntBASIC2.14□□□□□ -2.07
SLC44A1Q8WWI5 AC125232.2-201ENST00000592457 143 ntBASIC2.14□□□□□ -2.07
SLC44A1Q8WWI5 AC092447.9-201ENST00000603395 144 ntBASIC2.14□□□□□ -2.07
SLC44A1Q8WWI5 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.14□□□□□ -2.07
SLC44A1Q8WWI5 MIR1248-201ENST00000629190 106 ntBASIC2.14□□□□□ -2.07
SLC44A1Q8WWI5 Y_RNA.28-201ENST00000362554 111 ntBASIC2.13□□□□□ -2.07
SLC44A1Q8WWI5 Y_RNA.31-201ENST00000362574 102 ntBASIC2.13□□□□□ -2.07
SLC44A1Q8WWI5 Y_RNA.39-201ENST00000362620 98 ntBASIC2.13□□□□□ -2.07
SLC44A1Q8WWI5 RNA5SP138-201ENST00000365098 114 ntBASIC2.13□□□□□ -2.07
SLC44A1Q8WWI5 RNU1-148P-201ENST00000384472 162 ntBASIC2.13□□□□□ -2.07
SLC44A1Q8WWI5 AL357139.1-201ENST00000407792 426 ntBASIC2.13□□□□□ -2.07
SLC44A1Q8WWI5 MTND4P19-201ENST00000446659 478 ntBASIC2.13□□□□□ -2.07
SLC44A1Q8WWI5 CHEK2P4-201ENST00000450340 246 ntBASIC2.13□□□□□ -2.07
SLC44A1Q8WWI5 AC107032.1-201ENST00000485945 480 ntBASIC2.13□□□□□ -2.07
SLC44A1Q8WWI5 RPS23P5-201ENST00000495419 428 ntBASIC2.13□□□□□ -2.07
SLC44A1Q8WWI5 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.13□□□□□ -2.07
SLC44A1Q8WWI5 RNU1-41P-201ENST00000516161 162 ntBASIC2.13□□□□□ -2.07
SLC44A1Q8WWI5 RNU1-48P-201ENST00000516400 162 ntBASIC2.13□□□□□ -2.07
SLC44A1Q8WWI5 RNU5F-4P-201ENST00000516581 114 ntBASIC2.13□□□□□ -2.07
SLC44A1Q8WWI5 RNU4-77P-201ENST00000516692 156 ntBASIC2.13□□□□□ -2.07
SLC44A1Q8WWI5 RNU6-965P-201ENST00000516721 96 ntBASIC2.13□□□□□ -2.07
SLC44A1Q8WWI5 RNU6-1098P-201ENST00000516772 96 ntBASIC2.13□□□□□ -2.07
SLC44A1Q8WWI5 RNU2-44P-201ENST00000516795 194 ntBASIC2.13□□□□□ -2.07
SLC44A1Q8WWI5 RNU1-40P-201ENST00000516816 164 ntBASIC2.13□□□□□ -2.07
SLC44A1Q8WWI5 RNU1-97P-201ENST00000516872 164 ntBASIC2.13□□□□□ -2.07
SLC44A1Q8WWI5 RNU6-667P-201ENST00000517186 102 ntBASIC2.13□□□□□ -2.07
SLC44A1Q8WWI5 GNAI2P1-201ENST00000541815 315 ntBASIC2.13□□□□□ -2.07
SLC44A1Q8WWI5 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.13□□□□□ -2.07
SLC44A1Q8WWI5 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.13□□□□□ -2.07
SLC44A1Q8WWI5 VN1R91P-201ENST00000594377 169 ntBASIC2.13□□□□□ -2.07
SLC44A1Q8WWI5 U2.1-201ENST00000618978 145 ntBASIC2.13□□□□□ -2.07
SLC44A1Q8WWI5 AL606534.2-204ENST00000635008 178 ntBASIC2.13□□□□□ -2.07
SLC44A1Q8WWI5 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SLC44A1Q8WWI5 SNORA70B-201ENST00000384210 135 ntBASIC2.12□□□□□ -2.07
SLC44A1Q8WWI5 MIR549A-201ENST00000385268 96 ntBASIC2.12□□□□□ -2.07
SLC44A1Q8WWI5 Y_RNA.605-201ENST00000410577 105 ntBASIC2.12□□□□□ -2.07
SLC44A1Q8WWI5 AC004866.1-201ENST00000411748 78 ntBASIC2.12□□□□□ -2.07
SLC44A1Q8WWI5 AC007395.1-201ENST00000451333 677 ntBASIC2.12□□□□□ -2.07
SLC44A1Q8WWI5 U8.22-201ENST00000459141 133 ntBASIC2.12□□□□□ -2.07
SLC44A1Q8WWI5 MIR449C-201ENST00000516047 92 ntBASIC2.12□□□□□ -2.07
SLC44A1Q8WWI5 SNORA25.14-201ENST00000516481 132 ntBASIC2.12□□□□□ -2.07
SLC44A1Q8WWI5 SNORA40.14-201ENST00000516543 86 ntBASIC2.12□□□□□ -2.07
SLC44A1Q8WWI5 RNU6-1153P-201ENST00000516760 105 ntBASIC2.12□□□□□ -2.07
SLC44A1Q8WWI5 RNU6-988P-201ENST00000519081 107 ntBASIC2.12□□□□□ -2.07
SLC44A1Q8WWI5 CYCSP26-201ENST00000534107 320 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms