Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.29□□□□□ -1.88
SH3RF3Q8TEJ3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SH3RF3Q8TEJ3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.29□□□□□ -1.88
SH3RF3Q8TEJ3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SH3RF3Q8TEJ3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.29□□□□□ -1.88
SH3RF3Q8TEJ3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SH3RF3Q8TEJ3 Y_RNA.7-201ENST00000362352 102 ntBASIC3.28□□□□□ -1.88
SH3RF3Q8TEJ3 RNU5B-2P-201ENST00000363036 113 ntBASIC3.28□□□□□ -1.88
SH3RF3Q8TEJ3 CD24P4-201ENST00000382840 243 ntBASIC3.28□□□□□ -1.88
SH3RF3Q8TEJ3 SNORD116-14-201ENST00000383894 92 ntBASIC3.28□□□□□ -1.88
SH3RF3Q8TEJ3 SNORD116-17-201ENST00000383929 92 ntBASIC3.28□□□□□ -1.88
SH3RF3Q8TEJ3 RNU6-72P-201ENST00000384285 79 ntBASIC3.28□□□□□ -1.88
SH3RF3Q8TEJ3 SNORD116-15-201ENST00000384445 92 ntBASIC3.28□□□□□ -1.88
SH3RF3Q8TEJ3 SNORD116-20-201ENST00000384529 92 ntBASIC3.28□□□□□ -1.88
SH3RF3Q8TEJ3 SNORD116-19-201ENST00000384729 92 ntBASIC3.28□□□□□ -1.88
SH3RF3Q8TEJ3 MIR9-1-201ENST00000385198 89 ntBASIC3.28□□□□□ -1.88
SH3RF3Q8TEJ3 TRIAP1P1-201ENST00000427062 225 ntBASIC3.28□□□□□ -1.88
SH3RF3Q8TEJ3 AC010099.1-201ENST00000455434 375 ntBASIC3.28□□□□□ -1.88
SH3RF3Q8TEJ3 RPS20P22-201ENST00000473700 357 ntBASIC3.28□□□□□ -1.88
SH3RF3Q8TEJ3 RPS27AP9-201ENST00000477681 438 ntBASIC3.28□□□□□ -1.88
SH3RF3Q8TEJ3 KC877373.1-201ENST00000479066 408 ntBASIC3.28□□□□□ -1.88
SH3RF3Q8TEJ3 RNU4-57P-201ENST00000515980 135 ntBASIC3.28□□□□□ -1.88
SH3RF3Q8TEJ3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.28□□□□□ -1.88
SH3RF3Q8TEJ3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.28□□□□□ -1.88
SH3RF3Q8TEJ3 MIR548X2-201ENST00000579776 100 ntBASIC3.28□□□□□ -1.88
SH3RF3Q8TEJ3 ZNF861P-201ENST00000588126 639 ntBASIC3.28□□□□□ -1.88
SH3RF3Q8TEJ3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.28□□□□□ -1.88
SH3RF3Q8TEJ3 AC022441.3-201ENST00000605737 136 ntBASIC3.28□□□□□ -1.88
SH3RF3Q8TEJ3 AC090115.4-201ENST00000609970 188 ntBASIC3.28□□□□□ -1.88
SH3RF3Q8TEJ3 AC005296.1-201ENST00000616145 209 ntBASIC3.28□□□□□ -1.88
SH3RF3Q8TEJ3 AC006001.4-201ENST00000622243 395 ntBASIC3.28□□□□□ -1.88
SH3RF3Q8TEJ3 AC073308.1-201ENST00000623696 305 ntBASIC3.28□□□□□ -1.88
SH3RF3Q8TEJ3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.28□□□□□ -1.88
SH3RF3Q8TEJ3 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SH3RF3Q8TEJ3 AC010680.1-201ENST00000590024 3590 ntBASIC3.27□□□□□ -1.89
SH3RF3Q8TEJ3 SNORA29-201ENST00000384183 140 ntBASIC3.27□□□□□ -1.89
SH3RF3Q8TEJ3 SNORA40-201ENST00000388090 126 ntBASIC3.27□□□□□ -1.89
SH3RF3Q8TEJ3 RNU6-159P-201ENST00000391080 106 ntBASIC3.27□□□□□ -1.89
SH3RF3Q8TEJ3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SH3RF3Q8TEJ3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.27□□□□□ -1.89
SH3RF3Q8TEJ3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.27□□□□□ -1.89
SH3RF3Q8TEJ3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SH3RF3Q8TEJ3 AC009969.1-201ENST00000438726 172 ntBASIC3.27□□□□□ -1.89
SH3RF3Q8TEJ3 AC090525.1-201ENST00000479116 478 ntBASIC3.27□□□□□ -1.89
SH3RF3Q8TEJ3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.27□□□□□ -1.89
SH3RF3Q8TEJ3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.27□□□□□ -1.89
SH3RF3Q8TEJ3 RNU6-572P-201ENST00000516724 80 ntBASIC3.27□□□□□ -1.89
SH3RF3Q8TEJ3 RNU6-1234P-201ENST00000516877 103 ntBASIC3.27□□□□□ -1.89
SH3RF3Q8TEJ3 RNA5SP380-201ENST00000517190 98 ntBASIC3.27□□□□□ -1.89
SH3RF3Q8TEJ3 DEFB131C-201ENST00000528817 165 ntBASIC3.27□□□□□ -1.89
SH3RF3Q8TEJ3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.27□□□□□ -1.89
SH3RF3Q8TEJ3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.27□□□□□ -1.89
SH3RF3Q8TEJ3 MIR3684-201ENST00000579779 74 ntBASIC3.27□□□□□ -1.89
SH3RF3Q8TEJ3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.27□□□□□ -1.89
SH3RF3Q8TEJ3 SNORA43.4-201ENST00000629559 138 ntBASIC3.27□□□□□ -1.89
SH3RF3Q8TEJ3 MIR4679-1-201ENST00000637619 75 ntBASIC3.27□□□□□ -1.89
SH3RF3Q8TEJ3 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.27□□□□□ -1.89
SH3RF3Q8TEJ3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SH3RF3Q8TEJ3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.26□□□□□ -1.89
SH3RF3Q8TEJ3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
SH3RF3Q8TEJ3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SH3RF3Q8TEJ3 Y_RNA.43-201ENST00000362670 111 ntBASIC3.26□□□□□ -1.89
SH3RF3Q8TEJ3 RNU6-859P-201ENST00000362728 107 ntBASIC3.26□□□□□ -1.89
SH3RF3Q8TEJ3 RNU4-80P-201ENST00000363200 141 ntBASIC3.26□□□□□ -1.89
SH3RF3Q8TEJ3 Y_RNA.121-201ENST00000363309 113 ntBASIC3.26□□□□□ -1.89
SH3RF3Q8TEJ3 RNU6-198P-201ENST00000384258 104 ntBASIC3.26□□□□□ -1.89
SH3RF3Q8TEJ3 MIR196B-201ENST00000384852 84 ntBASIC3.26□□□□□ -1.89
SH3RF3Q8TEJ3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SH3RF3Q8TEJ3 AC007560.1-201ENST00000426912 237 ntBASIC3.26□□□□□ -1.89
SH3RF3Q8TEJ3 AC112220.1-201ENST00000434628 355 ntBASIC3.26□□□□□ -1.89
SH3RF3Q8TEJ3 RPS15AP5-201ENST00000436276 388 ntBASIC3.26□□□□□ -1.89
SH3RF3Q8TEJ3 RPS29P6-201ENST00000438196 145 ntBASIC3.26□□□□□ -1.89
SH3RF3Q8TEJ3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.26□□□□□ -1.89
SH3RF3Q8TEJ3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.26□□□□□ -1.89
SH3RF3Q8TEJ3 RNA5SP165-201ENST00000517142 115 ntBASIC3.26□□□□□ -1.89
SH3RF3Q8TEJ3 TRAV28-201ENST00000557548 323 ntBASIC3.26□□□□□ -1.89
SH3RF3Q8TEJ3 MIR5695-201ENST00000579717 85 ntBASIC3.26□□□□□ -1.89
SH3RF3Q8TEJ3 MIR3145-201ENST00000580727 82 ntBASIC3.26□□□□□ -1.89
SH3RF3Q8TEJ3 AC005176.2-201ENST00000596933 147 ntBASIC3.26□□□□□ -1.89
SH3RF3Q8TEJ3 AL359881.1-201ENST00000602916 267 ntBASIC3.26□□□□□ -1.89
SH3RF3Q8TEJ3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SH3RF3Q8TEJ3 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SH3RF3Q8TEJ3 ZNF204P-201ENST00000416749 2397 ntBASIC3.26□□□□□ -1.89
SH3RF3Q8TEJ3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SH3RF3Q8TEJ3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.25□□□□□ -1.89
SH3RF3Q8TEJ3 AC099654.7-201ENST00000635788 2127 ntBASIC3.25□□□□□ -1.89
SH3RF3Q8TEJ3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SH3RF3Q8TEJ3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SH3RF3Q8TEJ3 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SH3RF3Q8TEJ3 RNU6-1272P-201ENST00000362776 107 ntBASIC3.25□□□□□ -1.89
SH3RF3Q8TEJ3 Y_RNA.245-201ENST00000364493 95 ntBASIC3.25□□□□□ -1.89
SH3RF3Q8TEJ3 RNU6-239P-201ENST00000390990 99 ntBASIC3.25□□□□□ -1.89
SH3RF3Q8TEJ3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.25□□□□□ -1.89
SH3RF3Q8TEJ3 RNU6-1199P-201ENST00000411249 104 ntBASIC3.25□□□□□ -1.89
SH3RF3Q8TEJ3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.25□□□□□ -1.89
SH3RF3Q8TEJ3 AC243964.1-201ENST00000441814 261 ntBASIC3.25□□□□□ -1.89
SH3RF3Q8TEJ3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.25□□□□□ -1.89
SH3RF3Q8TEJ3 AL078601.1-201ENST00000444542 271 ntBASIC3.25□□□□□ -1.89
SH3RF3Q8TEJ3 AP004217.1-201ENST00000480579 346 ntBASIC3.25□□□□□ -1.89
SH3RF3Q8TEJ3 PDCD5P2-201ENST00000507570 312 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms