Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.89□□□□□ -1.95
CCHCR1Q8TD31 UQCRBP2-201ENST00000447827 297 ntBASIC2.89□□□□□ -1.95
CCHCR1Q8TD31 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.89□□□□□ -1.95
CCHCR1Q8TD31 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.89□□□□□ -1.95
CCHCR1Q8TD31 SCARNA13-201ENST00000516672 275 ntBASIC2.89□□□□□ -1.95
CCHCR1Q8TD31 SNORA31.15-201ENST00000516771 132 ntBASIC2.89□□□□□ -1.95
CCHCR1Q8TD31 RNU2-44P-201ENST00000516795 194 ntBASIC2.89□□□□□ -1.95
CCHCR1Q8TD31 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.89□□□□□ -1.95
CCHCR1Q8TD31 AC018448.1-201ENST00000552843 316 ntBASIC2.89□□□□□ -1.95
CCHCR1Q8TD31 AC105245.1-201ENST00000581934 244 ntBASIC2.89□□□□□ -1.95
CCHCR1Q8TD31 ZNF861P-201ENST00000588126 639 ntBASIC2.89□□□□□ -1.95
CCHCR1Q8TD31 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.89□□□□□ -1.95
CCHCR1Q8TD31 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CCHCR1Q8TD31 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CCHCR1Q8TD31 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCHCR1Q8TD31 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.88□□□□□ -1.95
CCHCR1Q8TD31 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.88□□□□□ -1.95
CCHCR1Q8TD31 Y_RNA.350-201ENST00000365409 98 ntBASIC2.88□□□□□ -1.95
CCHCR1Q8TD31 Y_RNA.476-201ENST00000384347 108 ntBASIC2.88□□□□□ -1.95
CCHCR1Q8TD31 MIR218-1-201ENST00000384999 110 ntBASIC2.88□□□□□ -1.95
CCHCR1Q8TD31 Y_RNA.597-201ENST00000410463 100 ntBASIC2.88□□□□□ -1.95
CCHCR1Q8TD31 AL390729.2-201ENST00000416137 156 ntBASIC2.88□□□□□ -1.95
CCHCR1Q8TD31 HSPE1P25-201ENST00000455484 251 ntBASIC2.88□□□□□ -1.95
CCHCR1Q8TD31 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.88□□□□□ -1.95
CCHCR1Q8TD31 MTND1P19-201ENST00000511780 315 ntBASIC2.88□□□□□ -1.95
CCHCR1Q8TD31 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.88□□□□□ -1.95
CCHCR1Q8TD31 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.88□□□□□ -1.95
CCHCR1Q8TD31 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.88□□□□□ -1.95
CCHCR1Q8TD31 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.88□□□□□ -1.95
CCHCR1Q8TD31 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.88□□□□□ -1.95
CCHCR1Q8TD31 MIR3199-1-201ENST00000582434 88 ntBASIC2.88□□□□□ -1.95
CCHCR1Q8TD31 MIR5006-201ENST00000583027 110 ntBASIC2.88□□□□□ -1.95
CCHCR1Q8TD31 SNORD11B-201ENST00000607707 90 ntBASIC2.88□□□□□ -1.95
CCHCR1Q8TD31 AC069294.1-201ENST00000608397 350 ntBASIC2.88□□□□□ -1.95
CCHCR1Q8TD31 AC127459.3-201ENST00000624328 466 ntBASIC2.88□□□□□ -1.95
CCHCR1Q8TD31 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.88□□□□□ -1.95
CCHCR1Q8TD31 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
CCHCR1Q8TD31 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CCHCR1Q8TD31 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.87□□□□□ -1.95
CCHCR1Q8TD31 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.87□□□□□ -1.95
CCHCR1Q8TD31 MIR6073-201ENST00000352083 89 ntBASIC2.87□□□□□ -1.95
CCHCR1Q8TD31 MIR410-201ENST00000362222 80 ntBASIC2.87□□□□□ -1.95
CCHCR1Q8TD31 SNORA67.2-201ENST00000384300 149 ntBASIC2.87□□□□□ -1.95
CCHCR1Q8TD31 RNU6-102P-201ENST00000384485 104 ntBASIC2.87□□□□□ -1.95
CCHCR1Q8TD31 RNU6-1274P-201ENST00000384557 107 ntBASIC2.87□□□□□ -1.95
CCHCR1Q8TD31 Y_RNA.541-201ENST00000384640 113 ntBASIC2.87□□□□□ -1.95
CCHCR1Q8TD31 RNA5SP504-201ENST00000410676 117 ntBASIC2.87□□□□□ -1.95
CCHCR1Q8TD31 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.87□□□□□ -1.95
CCHCR1Q8TD31 AC092427.1-202ENST00000430569 476 ntBASIC2.87□□□□□ -1.95
CCHCR1Q8TD31 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.87□□□□□ -1.95
CCHCR1Q8TD31 RNU6-625P-201ENST00000459412 107 ntBASIC2.87□□□□□ -1.95
CCHCR1Q8TD31 SEPT14P8-201ENST00000508026 178 ntBASIC2.87□□□□□ -1.95
CCHCR1Q8TD31 AC018630.3-201ENST00000542637 96 ntBASIC2.87□□□□□ -1.95
CCHCR1Q8TD31 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.87□□□□□ -1.95
CCHCR1Q8TD31 SNORD113-5-201ENST00000607261 78 ntBASIC2.87□□□□□ -1.95
CCHCR1Q8TD31 AC090517.3-201ENST00000625170 141 ntBASIC2.87□□□□□ -1.95
CCHCR1Q8TD31 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.87□□□□□ -1.95
CCHCR1Q8TD31 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.86□□□□□ -1.95
CCHCR1Q8TD31 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
CCHCR1Q8TD31 RNU6-727P-201ENST00000363592 107 ntBASIC2.86□□□□□ -1.95
CCHCR1Q8TD31 RNU6-379P-201ENST00000363813 104 ntBASIC2.86□□□□□ -1.95
CCHCR1Q8TD31 RNU6-944P-201ENST00000364023 107 ntBASIC2.86□□□□□ -1.95
CCHCR1Q8TD31 Y_RNA.415-201ENST00000384012 112 ntBASIC2.86□□□□□ -1.95
CCHCR1Q8TD31 Y_RNA.498-201ENST00000384460 102 ntBASIC2.86□□□□□ -1.95
CCHCR1Q8TD31 AL033519.2-201ENST00000403958 392 ntBASIC2.86□□□□□ -1.95
CCHCR1Q8TD31 Y_RNA.602-201ENST00000410535 92 ntBASIC2.86□□□□□ -1.95
CCHCR1Q8TD31 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.86□□□□□ -1.95
CCHCR1Q8TD31 RAB28P5-201ENST00000427490 651 ntBASIC2.86□□□□□ -1.95
CCHCR1Q8TD31 AC108059.2-201ENST00000434626 151 ntBASIC2.86□□□□□ -1.95
CCHCR1Q8TD31 RPL39P38-201ENST00000467018 153 ntBASIC2.86□□□□□ -1.95
CCHCR1Q8TD31 RNU6-1338P-201ENST00000516328 91 ntBASIC2.86□□□□□ -1.95
CCHCR1Q8TD31 Y_RNA.680-201ENST00000516441 93 ntBASIC2.86□□□□□ -1.95
CCHCR1Q8TD31 RNU6-794P-201ENST00000517261 64 ntBASIC2.86□□□□□ -1.95
CCHCR1Q8TD31 RNU6-586P-201ENST00000517265 104 ntBASIC2.86□□□□□ -1.95
CCHCR1Q8TD31 AC055872.1-201ENST00000570978 278 ntBASIC2.86□□□□□ -1.95
CCHCR1Q8TD31 AC005176.2-201ENST00000596933 147 ntBASIC2.86□□□□□ -1.95
CCHCR1Q8TD31 RPL12P50-201ENST00000603116 116 ntBASIC2.86□□□□□ -1.95
CCHCR1Q8TD31 SDR42E1P4-201ENST00000620894 481 ntBASIC2.86□□□□□ -1.95
CCHCR1Q8TD31 AL137790.1-201ENST00000634283 177 ntBASIC2.86□□□□□ -1.95
CCHCR1Q8TD31 AC068205.3-201ENST00000636385 468 ntBASIC2.86□□□□□ -1.95
CCHCR1Q8TD31 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
CCHCR1Q8TD31 RNU4-90P-201ENST00000362773 141 ntBASIC2.85□□□□□ -1.95
CCHCR1Q8TD31 Y_RNA.237-201ENST00000364439 102 ntBASIC2.85□□□□□ -1.95
CCHCR1Q8TD31 Y_RNA.489-201ENST00000384410 101 ntBASIC2.85□□□□□ -1.95
CCHCR1Q8TD31 MIR95-201ENST00000385072 81 ntBASIC2.85□□□□□ -1.95
CCHCR1Q8TD31 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.85□□□□□ -1.95
CCHCR1Q8TD31 AL139132.1-201ENST00000431587 344 ntBASIC2.85□□□□□ -1.95
CCHCR1Q8TD31 RPS29P26-201ENST00000477483 171 ntBASIC2.85□□□□□ -1.95
CCHCR1Q8TD31 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.85□□□□□ -1.95
CCHCR1Q8TD31 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.85□□□□□ -1.95
CCHCR1Q8TD31 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.85□□□□□ -1.95
CCHCR1Q8TD31 AC012433.1-201ENST00000588916 398 ntBASIC2.85□□□□□ -1.95
CCHCR1Q8TD31 AC011373.1-201ENST00000607270 237 ntBASIC2.85□□□□□ -1.95
CCHCR1Q8TD31 AC008873.1-201ENST00000625051 138 ntBASIC2.85□□□□□ -1.95
CCHCR1Q8TD31 AC135776.4-201ENST00000624300 1904 ntBASIC2.85□□□□□ -1.95
CCHCR1Q8TD31 ZNF271P-202ENST00000465539 1970 ntBASIC2.85□□□□□ -1.95
CCHCR1Q8TD31 MTND5P6-201ENST00000422338 1798 ntBASIC2.84□□□□□ -1.95
CCHCR1Q8TD31 Z82209.1-201ENST00000422141 2135 ntBASIC2.84□□□□□ -1.95
CCHCR1Q8TD31 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.84□□□□□ -1.95
CCHCR1Q8TD31 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms