Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.67
NKX2-3Q8TAU0 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
NKX2-3Q8TAU0 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NKX2-3Q8TAU0 MIR448-201ENST00000362131 111 ntBASIC4.59□□□□□ -1.67
NKX2-3Q8TAU0 SNORA3.3-201ENST00000408712 125 ntBASIC4.59□□□□□ -1.67
NKX2-3Q8TAU0 AC073261.1-201ENST00000429409 121 ntBASIC4.59□□□□□ -1.67
NKX2-3Q8TAU0 AL121890.1-201ENST00000435457 205 ntBASIC4.59□□□□□ -1.67
NKX2-3Q8TAU0 AC069285.2-201ENST00000440210 275 ntBASIC4.59□□□□□ -1.67
NKX2-3Q8TAU0 RPS27AP10-201ENST00000496103 208 ntBASIC4.59□□□□□ -1.67
NKX2-3Q8TAU0 RAC1P2-201ENST00000511164 579 ntBASIC4.59□□□□□ -1.67
NKX2-3Q8TAU0 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.59□□□□□ -1.67
NKX2-3Q8TAU0 AC087499.8-201ENST00000578406 226 ntBASIC4.59□□□□□ -1.67
NKX2-3Q8TAU0 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.59□□□□□ -1.67
NKX2-3Q8TAU0 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC4.59□□□□□ -1.67
NKX2-3Q8TAU0 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NKX2-3Q8TAU0 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
NKX2-3Q8TAU0 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
NKX2-3Q8TAU0 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.58□□□□□ -1.68
NKX2-3Q8TAU0 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
NKX2-3Q8TAU0 RNU6-50P-201ENST00000362356 103 ntBASIC4.58□□□□□ -1.68
NKX2-3Q8TAU0 RNU6-1292P-201ENST00000383856 107 ntBASIC4.58□□□□□ -1.68
NKX2-3Q8TAU0 RNVU1-14-201ENST00000384770 164 ntBASIC4.58□□□□□ -1.68
NKX2-3Q8TAU0 AL355796.1-201ENST00000406706 323 ntBASIC4.58□□□□□ -1.68
NKX2-3Q8TAU0 NDUFB1P1-201ENST00000435191 180 ntBASIC4.58□□□□□ -1.68
NKX2-3Q8TAU0 NDUFB4P6-201ENST00000436819 366 ntBASIC4.58□□□□□ -1.68
NKX2-3Q8TAU0 SNORA71B-202ENST00000439232 272 ntBASIC4.58□□□□□ -1.68
NKX2-3Q8TAU0 RPS26P55-201ENST00000471178 356 ntBASIC4.58□□□□□ -1.68
NKX2-3Q8TAU0 S100A11P1-201ENST00000477525 312 ntBASIC4.58□□□□□ -1.68
NKX2-3Q8TAU0 AC022137.1-201ENST00000483735 151 ntBASIC4.58□□□□□ -1.68
NKX2-3Q8TAU0 ACA59.2-201ENST00000517061 156 ntBASIC4.58□□□□□ -1.68
NKX2-3Q8TAU0 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.58□□□□□ -1.68
NKX2-3Q8TAU0 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.58□□□□□ -1.68
NKX2-3Q8TAU0 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NKX2-3Q8TAU0 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NKX2-3Q8TAU0 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.58□□□□□ -1.68
NKX2-3Q8TAU0 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NKX2-3Q8TAU0 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
NKX2-3Q8TAU0 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NKX2-3Q8TAU0 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.57□□□□□ -1.68
NKX2-3Q8TAU0 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
NKX2-3Q8TAU0 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
NKX2-3Q8TAU0 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NKX2-3Q8TAU0 RNU6-600P-201ENST00000362524 99 ntBASIC4.57□□□□□ -1.68
NKX2-3Q8TAU0 SNORA27.1-201ENST00000362604 124 ntBASIC4.57□□□□□ -1.68
NKX2-3Q8TAU0 Y_RNA.107-201ENST00000363190 121 ntBASIC4.57□□□□□ -1.68
NKX2-3Q8TAU0 RNU6-1138P-201ENST00000365359 106 ntBASIC4.57□□□□□ -1.68
NKX2-3Q8TAU0 RNU6-788P-201ENST00000390967 104 ntBASIC4.57□□□□□ -1.68
NKX2-3Q8TAU0 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.57□□□□□ -1.68
NKX2-3Q8TAU0 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.57□□□□□ -1.68
NKX2-3Q8TAU0 AC007751.1-201ENST00000529260 376 ntBASIC4.57□□□□□ -1.68
NKX2-3Q8TAU0 AC105137.2-201ENST00000569073 466 ntBASIC4.57□□□□□ -1.68
NKX2-3Q8TAU0 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.57□□□□□ -1.68
NKX2-3Q8TAU0 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NKX2-3Q8TAU0 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NKX2-3Q8TAU0 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
NKX2-3Q8TAU0 AL133412.1-201ENST00000380194 2992 ntBASIC4.56□□□□□ -1.68
NKX2-3Q8TAU0 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NKX2-3Q8TAU0 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
NKX2-3Q8TAU0 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.56□□□□□ -1.68
NKX2-3Q8TAU0 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.56□□□□□ -1.68
NKX2-3Q8TAU0 SNORD74.4-201ENST00000364129 80 ntBASIC4.56□□□□□ -1.68
NKX2-3Q8TAU0 RNA5SP97-201ENST00000365006 84 ntBASIC4.56□□□□□ -1.68
NKX2-3Q8TAU0 RNU6-1276P-201ENST00000365372 104 ntBASIC4.56□□□□□ -1.68
NKX2-3Q8TAU0 Y_RNA.366-201ENST00000365540 102 ntBASIC4.56□□□□□ -1.68
NKX2-3Q8TAU0 SNORA1.3-201ENST00000384676 136 ntBASIC4.56□□□□□ -1.68
NKX2-3Q8TAU0 MIR586-201ENST00000385035 97 ntBASIC4.56□□□□□ -1.68
NKX2-3Q8TAU0 RNA5SP39-201ENST00000411245 120 ntBASIC4.56□□□□□ -1.68
NKX2-3Q8TAU0 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.56□□□□□ -1.68
NKX2-3Q8TAU0 AC084364.2-201ENST00000546924 395 ntBASIC4.56□□□□□ -1.68
NKX2-3Q8TAU0 AC021739.1-201ENST00000559631 174 ntBASIC4.56□□□□□ -1.68
NKX2-3Q8TAU0 MIR3690-201ENST00000580266 75 ntBASIC4.56□□□□□ -1.68
NKX2-3Q8TAU0 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
NKX2-3Q8TAU0 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NKX2-3Q8TAU0 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.55□□□□□ -1.68
NKX2-3Q8TAU0 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-3Q8TAU0 AC087190.4-201ENST00000574616 8334 ntBASIC4.55□□□□□ -1.68
NKX2-3Q8TAU0 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-3Q8TAU0 Y_RNA.66-201ENST00000362862 102 ntBASIC4.55□□□□□ -1.68
NKX2-3Q8TAU0 RNU6-242P-201ENST00000384359 107 ntBASIC4.55□□□□□ -1.68
NKX2-3Q8TAU0 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.55□□□□□ -1.68
NKX2-3Q8TAU0 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4.55□□□□□ -1.68
NKX2-3Q8TAU0 AL356535.1-201ENST00000440335 398 ntBASIC4.55□□□□□ -1.68
NKX2-3Q8TAU0 CYCSP35-201ENST00000451978 304 ntBASIC4.55□□□□□ -1.68
NKX2-3Q8TAU0 AC106707.2-201ENST00000484182 374 ntBASIC4.55□□□□□ -1.68
NKX2-3Q8TAU0 AC025445.1-201ENST00000502728 300 ntBASIC4.55□□□□□ -1.68
NKX2-3Q8TAU0 AC022695.1-201ENST00000522089 237 ntBASIC4.55□□□□□ -1.68
NKX2-3Q8TAU0 AC141557.1-201ENST00000540982 400 ntBASIC4.55□□□□□ -1.68
NKX2-3Q8TAU0 AC107294.3-201ENST00000609211 526 ntBASIC4.55□□□□□ -1.68
NKX2-3Q8TAU0 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC4.55□□□□□ -1.68
NKX2-3Q8TAU0 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-3Q8TAU0 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-3Q8TAU0 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.55□□□□□ -1.68
NKX2-3Q8TAU0 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-3Q8TAU0 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-3Q8TAU0 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
NKX2-3Q8TAU0 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.54□□□□□ -1.68
NKX2-3Q8TAU0 LINC01355-201ENST00000566551 5444 ntBASIC4.54□□□□□ -1.68
NKX2-3Q8TAU0 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NKX2-3Q8TAU0 RNU4-15P-201ENST00000362613 141 ntBASIC4.54□□□□□ -1.68
NKX2-3Q8TAU0 RNY1P1-201ENST00000364372 112 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms