Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AC010154.1-201ENST00000425857 269 ntBASIC0.69□□□□□ -2.3
ZIC4Q8N9L1 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.69□□□□□ -2.3
ZIC4Q8N9L1 RNU7-63P-201ENST00000459054 62 ntBASIC0.69□□□□□ -2.3
ZIC4Q8N9L1 AC007215.1-201ENST00000464893 276 ntBASIC0.69□□□□□ -2.3
ZIC4Q8N9L1 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.69□□□□□ -2.3
ZIC4Q8N9L1 SCARNA16.2-201ENST00000516520 172 ntBASIC0.69□□□□□ -2.3
ZIC4Q8N9L1 MIR5583-1-201ENST00000580941 59 ntBASIC0.69□□□□□ -2.3
ZIC4Q8N9L1 MTATP6P3-201ENST00000581686 676 ntBASIC0.69□□□□□ -2.3
ZIC4Q8N9L1 AL513534.2-201ENST00000603836 250 ntBASIC0.69□□□□□ -2.3
ZIC4Q8N9L1 AC137590.2-201ENST00000619709 240 ntBASIC0.69□□□□□ -2.3
ZIC4Q8N9L1 snoZ196.1-201ENST00000625269 89 ntBASIC0.69□□□□□ -2.3
ZIC4Q8N9L1 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.69□□□□□ -2.3
ZIC4Q8N9L1 RNU4-79P-201ENST00000362764 141 ntBASIC0.68□□□□□ -2.3
ZIC4Q8N9L1 SNORA72.3-201ENST00000365074 132 ntBASIC0.68□□□□□ -2.3
ZIC4Q8N9L1 RNU6-1240P-201ENST00000365155 104 ntBASIC0.68□□□□□ -2.3
ZIC4Q8N9L1 AC004866.1-201ENST00000411748 78 ntBASIC0.68□□□□□ -2.3
ZIC4Q8N9L1 AC004941.2-201ENST00000427009 228 ntBASIC0.68□□□□□ -2.3
ZIC4Q8N9L1 NDUFA5P4-201ENST00000436704 385 ntBASIC0.68□□□□□ -2.3
ZIC4Q8N9L1 RNU7-180P-201ENST00000459240 63 ntBASIC0.68□□□□□ -2.3
ZIC4Q8N9L1 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC0.68□□□□□ -2.3
ZIC4Q8N9L1 SNORA31.2-201ENST00000516019 134 ntBASIC0.68□□□□□ -2.3
ZIC4Q8N9L1 SNORA14.1-201ENST00000516113 141 ntBASIC0.68□□□□□ -2.3
ZIC4Q8N9L1 AC011604.1-201ENST00000545978 196 ntBASIC0.68□□□□□ -2.3
ZIC4Q8N9L1 FGF7P1-201ENST00000582820 288 ntBASIC0.68□□□□□ -2.3
ZIC4Q8N9L1 AL020996.3-201ENST00000606617 222 ntBASIC0.68□□□□□ -2.3
ZIC4Q8N9L1 AC109347.2-201ENST00000610220 349 ntBASIC0.68□□□□□ -2.3
ZIC4Q8N9L1 AL360219.1-201ENST00000610230 366 ntBASIC0.68□□□□□ -2.3
ZIC4Q8N9L1 AC108706.1-201ENST00000611053 297 ntBASIC0.68□□□□□ -2.3
ZIC4Q8N9L1 AL513423.1-201ENST00000621695 132 ntBASIC0.68□□□□□ -2.3
ZIC4Q8N9L1 AC008873.1-201ENST00000625051 138 ntBASIC0.68□□□□□ -2.3
ZIC4Q8N9L1 AC005609.4-201ENST00000625071 447 ntBASIC0.68□□□□□ -2.3
ZIC4Q8N9L1 Y_RNA.123-201ENST00000363338 102 ntBASIC0.67□□□□□ -2.3
ZIC4Q8N9L1 RNU1-36P-201ENST00000365130 165 ntBASIC0.67□□□□□ -2.3
ZIC4Q8N9L1 RNU6-910P-201ENST00000390844 107 ntBASIC0.67□□□□□ -2.3
ZIC4Q8N9L1 SNORD12-201ENST00000391002 90 ntBASIC0.67□□□□□ -2.3
ZIC4Q8N9L1 AL034345.1-201ENST00000407768 123 ntBASIC0.67□□□□□ -2.3
ZIC4Q8N9L1 MIR1287-201ENST00000408492 90 ntBASIC0.67□□□□□ -2.3
ZIC4Q8N9L1 MTND2P18-201ENST00000419962 1030 ntBASIC0.67□□□□□ -2.3
ZIC4Q8N9L1 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.67□□□□□ -2.3
ZIC4Q8N9L1 MTCYBP8-201ENST00000422855 651 ntBASIC0.67□□□□□ -2.3
ZIC4Q8N9L1 TIMM9P3-201ENST00000428659 274 ntBASIC0.67□□□□□ -2.3
ZIC4Q8N9L1 MTCO2P11-201ENST00000431069 680 ntBASIC0.67□□□□□ -2.3
ZIC4Q8N9L1 MTND1P27-201ENST00000451117 902 ntBASIC0.67□□□□□ -2.3
ZIC4Q8N9L1 RPS29P1-201ENST00000465274 159 ntBASIC0.67□□□□□ -2.3
ZIC4Q8N9L1 AC092991.1-201ENST00000477176 376 ntBASIC0.67□□□□□ -2.3
ZIC4Q8N9L1 SNORA31.10-201ENST00000516482 106 ntBASIC0.67□□□□□ -2.3
ZIC4Q8N9L1 AC025647.1-201ENST00000517879 253 ntBASIC0.67□□□□□ -2.3
ZIC4Q8N9L1 AC087854.1-201ENST00000519706 414 ntBASIC0.67□□□□□ -2.3
ZIC4Q8N9L1 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
ZIC4Q8N9L1 AC004223.2-201ENST00000590309 544 ntBASIC0.67□□□□□ -2.3
ZIC4Q8N9L1 HULC.1-201ENST00000612720 240 ntBASIC0.67□□□□□ -2.3
ZIC4Q8N9L1 MIR8054-201ENST00000620877 86 ntBASIC0.67□□□□□ -2.3
ZIC4Q8N9L1 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.67□□□□□ -2.3
ZIC4Q8N9L1 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
ZIC4Q8N9L1 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.67□□□□□ -2.3
ZIC4Q8N9L1 Y_RNA.226-201ENST00000364337 114 ntBASIC0.66□□□□□ -2.3
ZIC4Q8N9L1 SNORD114-24-201ENST00000365029 72 ntBASIC0.66□□□□□ -2.3
ZIC4Q8N9L1 RNU6-996P-201ENST00000365438 107 ntBASIC0.66□□□□□ -2.3
ZIC4Q8N9L1 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
ZIC4Q8N9L1 AL606923.1-201ENST00000406616 190 ntBASIC0.66□□□□□ -2.3
ZIC4Q8N9L1 RNU2-64P-201ENST00000411315 191 ntBASIC0.66□□□□□ -2.3
ZIC4Q8N9L1 AC016909.1-201ENST00000415916 166 ntBASIC0.66□□□□□ -2.3
ZIC4Q8N9L1 AC063976.4-201ENST00000421971 163 ntBASIC0.66□□□□□ -2.3
ZIC4Q8N9L1 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.66□□□□□ -2.3
ZIC4Q8N9L1 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.66□□□□□ -2.3
ZIC4Q8N9L1 AC245047.3-201ENST00000429428 127 ntBASIC0.66□□□□□ -2.3
ZIC4Q8N9L1 AL031667.1-201ENST00000440222 725 ntBASIC0.66□□□□□ -2.3
ZIC4Q8N9L1 AL606517.2-201ENST00000442855 241 ntBASIC0.66□□□□□ -2.3
ZIC4Q8N9L1 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.66□□□□□ -2.3
ZIC4Q8N9L1 RNU6-344P-201ENST00000516635 111 ntBASIC0.66□□□□□ -2.3
ZIC4Q8N9L1 RNU6-922P-201ENST00000516753 99 ntBASIC0.66□□□□□ -2.3
ZIC4Q8N9L1 AC060788.1-201ENST00000521318 469 ntBASIC0.66□□□□□ -2.3
ZIC4Q8N9L1 DEFB108E-201ENST00000524692 240 ntBASIC0.66□□□□□ -2.3
ZIC4Q8N9L1 CYP3A137P-201ENST00000562436 69 ntBASIC0.66□□□□□ -2.3
ZIC4Q8N9L1 AC008088.1-201ENST00000580993 280 ntBASIC0.66□□□□□ -2.3
ZIC4Q8N9L1 AL078603.1-201ENST00000603824 313 ntBASIC0.66□□□□□ -2.3
ZIC4Q8N9L1 AC022217.4-201ENST00000604389 163 ntBASIC0.66□□□□□ -2.3
ZIC4Q8N9L1 AC024933.1-201ENST00000608472 348 ntBASIC0.66□□□□□ -2.3
ZIC4Q8N9L1 GHRLOS.1-201ENST00000610995 70 ntBASIC0.66□□□□□ -2.3
ZIC4Q8N9L1 SNORD3E-202ENST00000627253 216 ntBASIC0.66□□□□□ -2.3
ZIC4Q8N9L1 SCARNA4-201ENST00000629045 128 ntBASIC0.66□□□□□ -2.3
ZIC4Q8N9L1 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.66□□□□□ -2.3
ZIC4Q8N9L1 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
ZIC4Q8N9L1 Y_RNA.224-201ENST00000364308 111 ntBASIC0.65□□□□□ -2.31
ZIC4Q8N9L1 RNU6-1317P-201ENST00000364582 104 ntBASIC0.65□□□□□ -2.31
ZIC4Q8N9L1 SNORA26.8-201ENST00000391306 124 ntBASIC0.65□□□□□ -2.31
ZIC4Q8N9L1 MRPL42P3-201ENST00000401492 326 ntBASIC0.65□□□□□ -2.31
ZIC4Q8N9L1 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.65□□□□□ -2.31
ZIC4Q8N9L1 AL358934.1-201ENST00000432346 324 ntBASIC0.65□□□□□ -2.31
ZIC4Q8N9L1 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.65□□□□□ -2.31
ZIC4Q8N9L1 RNU6-221P-201ENST00000459541 99 ntBASIC0.65□□□□□ -2.31
ZIC4Q8N9L1 AC105758.1-201ENST00000506038 399 ntBASIC0.65□□□□□ -2.31
ZIC4Q8N9L1 RNU6-189P-201ENST00000516120 101 ntBASIC0.65□□□□□ -2.31
ZIC4Q8N9L1 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.65□□□□□ -2.31
ZIC4Q8N9L1 ACA64.5-201ENST00000516207 127 ntBASIC0.65□□□□□ -2.31
ZIC4Q8N9L1 MRPS36P4-201ENST00000534436 298 ntBASIC0.65□□□□□ -2.31
ZIC4Q8N9L1 SCOCP1-201ENST00000554676 349 ntBASIC0.65□□□□□ -2.31
ZIC4Q8N9L1 AC004584.2-201ENST00000570407 410 ntBASIC0.65□□□□□ -2.31
ZIC4Q8N9L1 AL162424.1-201ENST00000602325 221 ntBASIC0.65□□□□□ -2.31
ZIC4Q8N9L1 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms