Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM48Q8IWZ4 SNORD56.3-201ENST00000363507 71 ntBASIC3.11□□□□□ -1.91
TRIM48Q8IWZ4 Y_RNA.304-201ENST00000365011 112 ntBASIC3.11□□□□□ -1.91
TRIM48Q8IWZ4 CD24P4-201ENST00000382840 243 ntBASIC3.11□□□□□ -1.91
TRIM48Q8IWZ4 AL031003.1-201ENST00000404229 172 ntBASIC3.11□□□□□ -1.91
TRIM48Q8IWZ4 AC092185.1-201ENST00000491371 97 ntBASIC3.11□□□□□ -1.91
TRIM48Q8IWZ4 RNU6-1219P-201ENST00000516143 112 ntBASIC3.11□□□□□ -1.91
TRIM48Q8IWZ4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM48Q8IWZ4 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM48Q8IWZ4 AC104465.1-201ENST00000611365 139 ntBASIC3.11□□□□□ -1.91
TRIM48Q8IWZ4 uc_338.25-201ENST00000613756 156 ntBASIC3.11□□□□□ -1.91
TRIM48Q8IWZ4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.11□□□□□ -1.91
TRIM48Q8IWZ4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM48Q8IWZ4 U2.22-201ENST00000636441 106 ntBASIC3.11□□□□□ -1.91
TRIM48Q8IWZ4 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.11□□□□□ -1.91
TRIM48Q8IWZ4 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM48Q8IWZ4 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.1□□□□□ -1.91
TRIM48Q8IWZ4 AC091564.4-201ENST00000533934 2194 ntBASIC3.1□□□□□ -1.91
TRIM48Q8IWZ4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM48Q8IWZ4 AL157777.2-201ENST00000258070 137 ntBASIC3.1□□□□□ -1.91
TRIM48Q8IWZ4 RNA5SP383-201ENST00000362934 120 ntBASIC3.1□□□□□ -1.91
TRIM48Q8IWZ4 RNU6-653P-201ENST00000363074 106 ntBASIC3.1□□□□□ -1.91
TRIM48Q8IWZ4 SNORD115-30-201ENST00000364117 82 ntBASIC3.1□□□□□ -1.91
TRIM48Q8IWZ4 SNORD32B-201ENST00000364460 84 ntBASIC3.1□□□□□ -1.91
TRIM48Q8IWZ4 Y_RNA.506-201ENST00000384494 102 ntBASIC3.1□□□□□ -1.91
TRIM48Q8IWZ4 RNU6-125P-201ENST00000384505 107 ntBASIC3.1□□□□□ -1.91
TRIM48Q8IWZ4 RNU6-763P-201ENST00000390865 106 ntBASIC3.1□□□□□ -1.91
TRIM48Q8IWZ4 RNU1-101P-201ENST00000391171 127 ntBASIC3.1□□□□□ -1.91
TRIM48Q8IWZ4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM48Q8IWZ4 RNA5SP229-201ENST00000410809 99 ntBASIC3.1□□□□□ -1.91
TRIM48Q8IWZ4 Z92545.1-201ENST00000411782 234 ntBASIC3.1□□□□□ -1.91
TRIM48Q8IWZ4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.1□□□□□ -1.91
TRIM48Q8IWZ4 AL135790.2-201ENST00000437701 267 ntBASIC3.1□□□□□ -1.91
TRIM48Q8IWZ4 SNORD59.2-201ENST00000516873 68 ntBASIC3.1□□□□□ -1.91
TRIM48Q8IWZ4 AP005660.1-201ENST00000522972 293 ntBASIC3.1□□□□□ -1.91
TRIM48Q8IWZ4 MIR2682-201ENST00000580305 110 ntBASIC3.1□□□□□ -1.91
TRIM48Q8IWZ4 AC023043.3-201ENST00000593113 385 ntBASIC3.1□□□□□ -1.91
TRIM48Q8IWZ4 AC107294.3-201ENST00000609211 526 ntBASIC3.1□□□□□ -1.91
TRIM48Q8IWZ4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
TRIM48Q8IWZ4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM48Q8IWZ4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.09□□□□□ -1.91
TRIM48Q8IWZ4 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.09□□□□□ -1.91
TRIM48Q8IWZ4 Y_RNA.8-201ENST00000362353 102 ntBASIC3.09□□□□□ -1.91
TRIM48Q8IWZ4 AC009969.1-201ENST00000438726 172 ntBASIC3.09□□□□□ -1.91
TRIM48Q8IWZ4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.09□□□□□ -1.91
TRIM48Q8IWZ4 AC115115.1-201ENST00000449927 248 ntBASIC3.09□□□□□ -1.91
TRIM48Q8IWZ4 RNA5SP112-201ENST00000515937 99 ntBASIC3.09□□□□□ -1.91
TRIM48Q8IWZ4 RNU5F-4P-201ENST00000516581 114 ntBASIC3.09□□□□□ -1.91
TRIM48Q8IWZ4 RNU6-1212P-201ENST00000517023 104 ntBASIC3.09□□□□□ -1.91
TRIM48Q8IWZ4 RNA5SP380-201ENST00000517190 98 ntBASIC3.09□□□□□ -1.91
TRIM48Q8IWZ4 MRPS18CP4-201ENST00000535821 231 ntBASIC3.09□□□□□ -1.91
TRIM48Q8IWZ4 AC005000.2-201ENST00000605468 310 ntBASIC3.09□□□□□ -1.91
TRIM48Q8IWZ4 U6.106-201ENST00000636360 105 ntBASIC3.09□□□□□ -1.91
TRIM48Q8IWZ4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TRIM48Q8IWZ4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.09□□□□□ -1.92
TRIM48Q8IWZ4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 AC134026.1-201ENST00000623249 2239 ntBASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 AL365361.1-201ENST00000566942 3481 ntBASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 MIR422A-201ENST00000362286 90 ntBASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 U3.8-201ENST00000363675 217 ntBASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 RNU6-1048P-201ENST00000364054 107 ntBASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 RNU6-801P-201ENST00000364087 105 ntBASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 RNU6-804P-201ENST00000384286 107 ntBASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 SNORD15B-201ENST00000384714 146 ntBASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 MIR128-1-201ENST00000384921 82 ntBASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 RNU6-1248P-201ENST00000391096 64 ntBASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 SNORA48.5-201ENST00000391143 135 ntBASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 AL357139.1-201ENST00000407792 426 ntBASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 TOMM22P2-201ENST00000430735 237 ntBASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 RPL27AP5-201ENST00000469428 449 ntBASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 AC021205.2-201ENST00000480069 347 ntBASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 RNA5SP341-201ENST00000516261 117 ntBASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 RNU6-406P-201ENST00000516470 107 ntBASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 AC009127.3-201ENST00000570531 403 ntBASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 MIR4325-201ENST00000583049 90 ntBASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 U6.115-201ENST00000636045 103 ntBASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM48Q8IWZ4 MAPK10-322ENST00000641485 4530 ntBASIC3.07□□□□□ -1.92
TRIM48Q8IWZ4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.07□□□□□ -1.92
TRIM48Q8IWZ4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.07□□□□□ -1.92
TRIM48Q8IWZ4 Y_RNA.170-201ENST00000363746 110 ntBASIC3.07□□□□□ -1.92
TRIM48Q8IWZ4 RNU6-944P-201ENST00000364023 107 ntBASIC3.07□□□□□ -1.92
TRIM48Q8IWZ4 Y_RNA.240-201ENST00000364469 95 ntBASIC3.07□□□□□ -1.92
TRIM48Q8IWZ4 Y_RNA.243-201ENST00000364481 109 ntBASIC3.07□□□□□ -1.92
TRIM48Q8IWZ4 SNORA51.4-201ENST00000364993 124 ntBASIC3.07□□□□□ -1.92
TRIM48Q8IWZ4 RNU6-1083P-201ENST00000384022 107 ntBASIC3.07□□□□□ -1.92
TRIM48Q8IWZ4 RNU6-1274P-201ENST00000384557 107 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms